Result of FASTA (omim) for
pFN21AE0910
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0910, 231 aa
1>>>pF1KE0910 231 - 231 aa - 231 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4679+/-0.00038; mu= 18.4395+/- 0.023
mean_var=59.3460+/-11.973, 0's: 0 Z-trim(111.7): 21 B-trim: 18 in 1/52
Lambda= 0.166486
statistics sampled from 20364 (20376) to 20364 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.239), width: 16
Scan time: 6.100
The best scores are: opt bits E(85289)
NP_001305869 (OMIM: 114480,160998) ribosyldihydron ( 231) 1569 385.2 5.1e-107
NP_001277150 (OMIM: 114480,160998) ribosyldihydron ( 231) 1569 385.2 5.1e-107
NP_000895 (OMIM: 114480,160998) ribosyldihydronico ( 231) 1569 385.2 5.1e-107
NP_000894 (OMIM: 125860) NAD(P)H dehydrogenase [qu ( 274) 743 186.9 3e-47
NP_001277151 (OMIM: 114480,160998) ribosyldihydron ( 193) 657 166.1 3.9e-41
NP_001020604 (OMIM: 125860) NAD(P)H dehydrogenase ( 240) 463 119.6 4.8e-27
NP_001020605 (OMIM: 125860) NAD(P)H dehydrogenase ( 236) 315 84.0 2.4e-16
NP_001273066 (OMIM: 125860) NAD(P)H dehydrogenase ( 202) 314 83.7 2.5e-16
>>NP_001305869 (OMIM: 114480,160998) ribosyldihydronicot (231 aa)
initn: 1569 init1: 1569 opt: 1569 Z-score: 2042.4 bits: 385.2 E(85289): 5.1e-107
Smith-Waterman score: 1569; 99.6% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
>>NP_001277150 (OMIM: 114480,160998) ribosyldihydronicot (231 aa)
initn: 1569 init1: 1569 opt: 1569 Z-score: 2042.4 bits: 385.2 E(85289): 5.1e-107
Smith-Waterman score: 1569; 99.6% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
>>NP_000895 (OMIM: 114480,160998) ribosyldihydronicotina (231 aa)
initn: 1569 init1: 1569 opt: 1569 Z-score: 2042.4 bits: 385.2 E(85289): 5.1e-107
Smith-Waterman score: 1569; 99.6% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_000 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
190 200 210 220 230
>>NP_000894 (OMIM: 125860) NAD(P)H dehydrogenase [quinon (274 aa)
initn: 747 init1: 722 opt: 743 Z-score: 969.2 bits: 186.9 E(85289): 3e-47
Smith-Waterman score: 743; 48.9% identity (76.5% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
:.:...::: ::.: ::: ..:..:. :...: :. ::::::::.: . ::::: :
NP_000 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
..: :.: .:. :::. :. ::. ::::.. :::::::::: ::.::::::::..::
NP_000 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
. ::. ..::.: ...: :.::.::::.. ::. :..:: .:::.: : ::::
NP_000 FIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
::.:: ::.... . . : .. .:..::..:: : :.
NP_000 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
190 200 210 220 230 240
NP_000 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
250 260 270
>>NP_001277151 (OMIM: 114480,160998) ribosyldihydronicot (193 aa)
initn: 656 init1: 656 opt: 657 Z-score: 859.5 bits: 166.1 E(85289): 3.9e-41
Smith-Waterman score: 1199; 83.1% identity (83.5% similar) in 231 aa overlap (1-231:1-193)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
NP_001 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNLEPRATDKDITGTL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
:::::::::::::::::::::::::::::::::::::::::
NP_001 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQ-------------------
70 80 90 100
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
:::::::::::::::::::::::::::::::::::::::::
NP_001 -------------------GKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
110 120 130 140
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
150 160 170 180 190
>>NP_001020604 (OMIM: 125860) NAD(P)H dehydrogenase [qui (240 aa)
initn: 577 init1: 442 opt: 463 Z-score: 606.5 bits: 119.6 E(85289): 4.8e-27
Smith-Waterman score: 552; 41.6% identity (64.7% similar) in 221 aa overlap (1-221:1-187)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
:.:...::: ::.: ::: ..:..:. :...: :. ::::::::.: . ::::: :
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
..: :.: .:. :::. :. ::. ::::.. :::::::::: ::.::::::::..::
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
. ::. ..::.: :.. : ::::
NP_001 FIGEFAYTYAAMYDKG----------------------------------PFRSGILHFC
130 140
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
::.:: ::.... . . : .. .:..::..:: : :.
NP_001 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
150 160 170 180 190 200
NP_001 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
210 220 230 240
>>NP_001020605 (OMIM: 125860) NAD(P)H dehydrogenase [qui (236 aa)
initn: 597 init1: 313 opt: 315 Z-score: 414.4 bits: 84.0 E(85289): 2.4e-16
Smith-Waterman score: 509; 39.8% identity (62.9% similar) in 221 aa overlap (1-221:1-183)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
:.:...::: ::.: ::: ..:..:. :...: :. ::::::::.: . ::::: :
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
..: :.: .:. :::. :. ::. ::::.. :::::::
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQ-------------------
70 80 90 100
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
.: :.::.::::.. ::. :..:: .:::.: : ::::
NP_001 -------------------SKKAVLSITTGGSGSMYSLQGIHGDMNVILWPIQSGILHFC
110 120 130 140
190 200 210 220 230
pF1KE0 GFKVLAPQISFAPEIASEEERKGMVAAWSQRLQTIWKEEPIPCTAHWHFGQ
::.:: ::.... . . : .. .:..::..:: : :.
NP_001 GFQVLEPQLTYSIGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMK
150 160 170 180 190 200
NP_001 KEVQDEEKNKKFGLSVGHHLGKSIPTDNQIKARK
210 220 230
>>NP_001273066 (OMIM: 125860) NAD(P)H dehydrogenase [qui (202 aa)
initn: 474 init1: 314 opt: 314 Z-score: 414.0 bits: 83.7 E(85289): 2.5e-16
Smith-Waterman score: 314; 49.5% identity (74.8% similar) in 107 aa overlap (1-107:1-107)
10 20 30 40 50 60
pF1KE0 MAGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTL
:.:...::: ::.: ::: ..:..:. :...: :. ::::::::.: . ::::: :
NP_001 MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 SNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRV
..: :.: .:. :::. :. ::. ::::.. ::::::: . :
NP_001 KDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQSGILHFCGFQVLEPQLTYS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 LCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLQHGTLHFC
NP_001 IGHTPADARIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMKKEVQDEEKNKKF
130 140 150 160 170 180
231 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:27:31 2016 done: Sat Nov 5 04:27:32 2016
Total Scan time: 6.100 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]