Result of FASTA (omim) for
pFN21AB6522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6522, 387 aa
1>>>pF1KB6522 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3952+/-0.000401; mu= 17.4912+/- 0.025
mean_var=96.2942+/-20.584, 0's: 0 Z-trim(112.3): 114 B-trim: 176 in 1/52
Lambda= 0.130700
statistics sampled from 21113 (21240) to 21113 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.249), width: 16
Scan time: 8.380
The best scores are: opt bits E(85289)
XP_016856915 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3 2e-139
XP_016856914 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3 2e-139
XP_011539866 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3 2e-139
XP_016856916 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3 2e-139
XP_006710741 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3 2e-139
NP_057060 (OMIM: 614904) sorting nexin-7 isoform a ( 451) 2565 494.4 2.2e-139
XP_016856917 (OMIM: 614904) PREDICTED: sorting nex ( 336) 2045 396.2 5.9e-110
XP_006710740 (OMIM: 614904) PREDICTED: sorting nex ( 422) 2045 396.3 7e-110
NP_689424 (OMIM: 614904) sorting nexin-7 isoform b ( 396) 1570 306.7 6.1e-83
NP_003785 (OMIM: 605931) sorting nexin-4 [Homo sap ( 450) 330 73.0 1.6e-12
NP_683758 (OMIM: 601272) sorting nexin-1 isoform b ( 457) 313 69.8 1.5e-11
NP_001265128 (OMIM: 605929) sorting nexin-2 isofor ( 402) 307 68.6 3e-11
NP_003091 (OMIM: 605929) sorting nexin-2 isoform 1 ( 519) 307 68.7 3.6e-11
XP_005254668 (OMIM: 601272) PREDICTED: sorting nex ( 399) 300 67.3 7.5e-11
NP_003090 (OMIM: 601272) sorting nexin-1 isoform a ( 522) 293 66.0 2.3e-10
NP_001229862 (OMIM: 601272) sorting nexin-1 isofor ( 557) 293 66.1 2.4e-10
NP_003786 (OMIM: 605930) sorting nexin-3 isoform a ( 162) 245 56.5 5.3e-08
XP_016862903 (OMIM: 605931) PREDICTED: sorting nex ( 482) 243 56.6 1.5e-07
NP_037478 (OMIM: 300883) sorting nexin-12 isoform ( 162) 236 54.8 1.7e-07
NP_001243114 (OMIM: 300883) sorting nexin-12 isofo ( 162) 236 54.8 1.7e-07
NP_001243117 (OMIM: 300883) sorting nexin-12 isofo ( 158) 217 51.2 2e-06
NP_001287858 (OMIM: 605930) sorting nexin-3 isofor ( 140) 213 50.4 3.1e-06
XP_011522999 (OMIM: 614906) PREDICTED: sorting nex ( 270) 202 48.6 2.1e-05
NP_037455 (OMIM: 614906) sorting nexin-11 isoform ( 270) 202 48.6 2.1e-05
NP_689450 (OMIM: 614906) sorting nexin-11 isoform ( 270) 202 48.6 2.1e-05
XP_005257317 (OMIM: 614906) PREDICTED: sorting nex ( 270) 202 48.6 2.1e-05
XP_005257319 (OMIM: 614906) PREDICTED: sorting nex ( 262) 199 48.0 3e-05
NP_001317249 (OMIM: 614906) sorting nexin-11 isofo ( 262) 199 48.0 3e-05
NP_689413 (OMIM: 605937) sorting nexin-5 isoform a ( 404) 179 44.4 0.00056
NP_055241 (OMIM: 605937) sorting nexin-5 isoform a ( 404) 179 44.4 0.00056
XP_016867573 (OMIM: 614905) PREDICTED: sorting nex ( 412) 172 43.1 0.0014
XP_016867572 (OMIM: 614905) PREDICTED: sorting nex ( 412) 172 43.1 0.0014
XP_011513632 (OMIM: 614905) PREDICTED: sorting nex ( 451) 172 43.2 0.0015
XP_011513631 (OMIM: 614905) PREDICTED: sorting nex ( 457) 172 43.2 0.0015
NP_037453 (OMIM: 614905) sorting nexin-8 [Homo sap ( 465) 172 43.2 0.0015
NP_037454 (OMIM: 614780,615085) sorting nexin-10 i ( 201) 162 40.9 0.0031
XP_006715775 (OMIM: 614780,615085) PREDICTED: sort ( 201) 162 40.9 0.0031
NP_001305128 (OMIM: 614780,615085) sorting nexin-1 ( 201) 162 40.9 0.0031
NP_001186764 (OMIM: 614780,615085) sorting nexin-1 ( 201) 162 40.9 0.0031
NP_001186766 (OMIM: 614780,615085) sorting nexin-1 ( 198) 161 40.7 0.0035
XP_016867575 (OMIM: 614780,615085) PREDICTED: sort ( 227) 161 40.8 0.0039
NP_001305127 (OMIM: 614780,615085) sorting nexin-1 ( 227) 161 40.8 0.0039
XP_016867574 (OMIM: 614780,615085) PREDICTED: sort ( 227) 161 40.8 0.0039
XP_016867576 (OMIM: 614780,615085) PREDICTED: sort ( 227) 161 40.8 0.0039
XP_011534188 (OMIM: 605952) PREDICTED: sorting nex ( 501) 160 41.0 0.0078
XP_005267072 (OMIM: 605952) PREDICTED: sorting nex ( 588) 160 41.0 0.0087
NP_057308 (OMIM: 605952) sorting nexin-9 [Homo sap ( 595) 160 41.0 0.0088
>>XP_016856915 (OMIM: 614904) PREDICTED: sorting nexin-7 (387 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2624.1 bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
310 320 330 340 350 360
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
370 380
>>XP_016856914 (OMIM: 614904) PREDICTED: sorting nexin-7 (387 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2624.1 bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
310 320 330 340 350 360
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
370 380
>>XP_011539866 (OMIM: 614904) PREDICTED: sorting nexin-7 (387 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2624.1 bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
310 320 330 340 350 360
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::
XP_011 EQCLATWESFLTSQTNLHLEEASEDKP
370 380
>>XP_016856916 (OMIM: 614904) PREDICTED: sorting nexin-7 (387 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2624.1 bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
310 320 330 340 350 360
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
370 380
>>XP_006710741 (OMIM: 614904) PREDICTED: sorting nexin-7 (387 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2624.1 bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
310 320 330 340 350 360
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::
XP_006 EQCLATWESFLTSQTNLHLEEASEDKP
370 380
>>NP_057060 (OMIM: 614904) sorting nexin-7 isoform a [Ho (451 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2623.3 bits: 494.4 E(85289): 2.2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:65-451)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
::::::::::::::::::::::::::::::
NP_057 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
340 350 360 370 380 390
340 350 360 370 380
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
400 410 420 430 440 450
>>XP_016856917 (OMIM: 614904) PREDICTED: sorting nexin-7 (336 aa)
initn: 2199 init1: 2045 opt: 2045 Z-score: 2095.0 bits: 396.2 E(85289): 5.9e-110
Smith-Waterman score: 2101; 86.8% identity (86.8% similar) in 387 aa overlap (1-387:1-336)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
:::::::::::
XP_016 VLTYKKADTDL-------------------------------------------------
310
370 380
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::
XP_016 --CLATWESFLTSQTNLHLEEASEDKP
320 330
>>XP_006710740 (OMIM: 614904) PREDICTED: sorting nexin-7 (422 aa)
initn: 2199 init1: 2045 opt: 2045 Z-score: 2093.8 bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2101; 86.8% identity (86.8% similar) in 387 aa overlap (1-387:87-422)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
::::::::::::::::::::::::::::::
XP_006 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
60 70 80 90 100 110
40 50 60 70 80 90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
120 130 140 150 160 170
100 110 120 130 140 150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
180 190 200 210 220 230
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
240 250 260 270 280 290
220 230 240 250 260 270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
300 310 320 330 340 350
280 290 300 310 320 330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
:::::::::::::::::::::::::::::::::::::::::
XP_006 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDL-------------------
360 370 380 390
340 350 360 370 380
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::
XP_006 --------------------------------CLATWESFLTSQTNLHLEEASEDKP
400 410 420
>>NP_689424 (OMIM: 614904) sorting nexin-7 isoform b [Ho (396 aa)
initn: 1570 init1: 1570 opt: 1570 Z-score: 1610.1 bits: 306.7 E(85289): 6.1e-83
Smith-Waterman score: 2072; 85.8% identity (85.8% similar) in 387 aa overlap (1-387:65-396)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
::::::::::::::::::::::::::::::
NP_689 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
:::: :
NP_689 LIIP-------------------------------------------------------E
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
280 290 300 310 320 330
340 350 360 370 380
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
340 350 360 370 380 390
>>NP_003785 (OMIM: 605931) sorting nexin-4 [Homo sapiens (450 aa)
initn: 279 init1: 113 opt: 330 Z-score: 345.7 bits: 73.0 E(85289): 1.6e-12
Smith-Waterman score: 339; 25.7% identity (60.5% similar) in 296 aa overlap (29-312:55-345)
10 20 30 40 50
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESH-----VTTIETFITYR
:: . :.:.: :.. .. ::. .:
NP_003 AGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEISVSEAEKRTGRNAMNMQETYTAYL
30 40 50 60 70 80
60 70 80 90 100
pF1KB6 IITKTSRGEFDSSEFE--VRRRYQDFLWLKGKLEEAHPTLIIPPLPEK---FIVKGM-VE
: :.. . .: . . :::..: :.. : .: ...:::::: :. . . ..
NP_003 IETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSAD
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB6 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQA-WELSSHKKQGPGLLSRMG
.. ::.: :: .:..:: :::.:: : .. : .::: .. :. . .. :. .
NP_003 NMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNET---GFQLKAD
150 160 170 180 190 200
170 180 190 200 210 220
pF1KB6 QTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGP
. ..:. ...: ::: ..: ..... . ... :. . .. :. . . .::
NP_003 SRLKALNATFR-VKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGR
210 220 230 240 250 260
230 240 250 260 270 280
pF1KB6 IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMK
. ::: :... : :.... .: .. . . : ..::..:.: : .: .
NP_003 VFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILED-EEHYADQLKEYLFYAEALRAVCR
270 280 290 300 310
290 300 310 320 330 340
pF1KB6 RRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
... .: .:. .. :. :: . . :
NP_003 KHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLE
320 330 340 350 360 370
387 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:20:03 2016 done: Sat Nov 5 04:20:05 2016
Total Scan time: 8.380 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]