Result of FASTA (ccds) for
pFN21AB6522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6522, 387 aa
1>>>pF1KB6522 387 - 387 aa - 387 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7869+/-0.000975; mu= 14.8046+/- 0.058
mean_var=82.6950+/-16.453, 0's: 0 Z-trim(105.2): 53 B-trim: 0 in 0/51
Lambda= 0.141038
statistics sampled from 8229 (8277) to 8229 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.254), width: 16
Scan time: 2.740
The best scores are: opt bits E(32554)
CCDS755.2 SNX7 gene_id:51375|Hs108|chr1 ( 451) 2565 531.9 4.3e-151
CCDS756.2 SNX7 gene_id:51375|Hs108|chr1 ( 396) 1570 329.4 3.4e-90
CCDS43865.1 SNX30 gene_id:401548|Hs108|chr9 ( 437) 1274 269.2 4.9e-72
CCDS3032.1 SNX4 gene_id:8723|Hs108|chr3 ( 450) 330 77.2 3.4e-14
CCDS32268.1 SNX1 gene_id:6642|Hs108|chr15 ( 457) 313 73.7 3.7e-13
CCDS64234.1 SNX2 gene_id:6643|Hs108|chr5 ( 402) 307 72.4 7.9e-13
CCDS34217.1 SNX2 gene_id:6643|Hs108|chr5 ( 519) 307 72.5 9.7e-13
CCDS32266.1 SNX1 gene_id:6642|Hs108|chr15 ( 522) 293 69.7 7e-12
CCDS58371.1 SNX1 gene_id:6642|Hs108|chr15 ( 557) 293 69.7 7.4e-12
>>CCDS755.2 SNX7 gene_id:51375|Hs108|chr1 (451 aa)
initn: 2565 init1: 2565 opt: 2565 Z-score: 2826.1 bits: 531.9 E(32554): 4.3e-151
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:65-451)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
::::::::::::::::::::::::::::::
CCDS75 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
340 350 360 370 380 390
340 350 360 370 380
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
400 410 420 430 440 450
>>CCDS756.2 SNX7 gene_id:51375|Hs108|chr1 (396 aa)
initn: 1570 init1: 1570 opt: 1570 Z-score: 1732.8 bits: 329.4 E(32554): 3.4e-90
Smith-Waterman score: 2072; 85.8% identity (85.8% similar) in 387 aa overlap (1-387:65-396)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
::::::::::::::::::::::::::::::
CCDS75 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
:::: :
CCDS75 LIIP-------------------------------------------------------E
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
160 170 180 190 200 210
220 230 240 250 260 270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
220 230 240 250 260 270
280 290 300 310 320 330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
280 290 300 310 320 330
340 350 360 370 380
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
340 350 360 370 380 390
>>CCDS43865.1 SNX30 gene_id:401548|Hs108|chr9 (437 aa)
initn: 1244 init1: 608 opt: 1274 Z-score: 1406.7 bits: 269.2 E(32554): 4.9e-72
Smith-Waterman score: 1274; 49.3% identity (81.5% similar) in 363 aa overlap (11-371:68-427)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPD--LKDLFITVDE
:.: :..:.....:. : .:::. ::.
CCDS43 TPSPDLLMARSFGDKDLILPNGGTPAGTSSPASSSSLLNRLQLDDDIDGETRDLFVIVDD
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 PESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPE
:..:: :.::.::::: ::..: ::: :. :::::::: ::..::::..:: .::::::
CCDS43 PKKHVCTMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPE
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB6 KFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQG
::.:::.:.::...:.::::::: :::.::.:::.:.::: :.:::::. .:...::::
CCDS43 KFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLTAK--DLNAYKKQG
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB6 PGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF
.::.:::..:. :..... ...:: :: ...... :. :.. ::.:.::: ::: ::.
CCDS43 IALLTRMGESVKHVTGGYK-LRTRPLEFAAIGDYLDTFALKLGTIDRIAQRIIKEEIEYL
220 230 240 250 260 270
220 230 240 250 260 270
pF1KB6 DEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYS
:..::::.. ::: : .:.. :. :..:: : : :. . ..: .:::..::.:::
CCDS43 VELREYGPVYSTWSALEGELAEPLEGVSACIGNCSTALEELTDDMTEDFLPVLREYILYS
280 290 300 310 320 330
280 290 300 310 320 330
pF1KB6 EMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWK
. . .:.:.:::.::: ..:.:... .: : .: .. : .:..:: : :::: :::.
CCDS43 DSMKSVLKKRDQVQAEYEAKLEAVALRKEDRPKVPADVEKCQDRMECFNADLKADMERWQ
340 350 360 370 380 390
340 350 360 370 380
pF1KB6 QNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
.: ..:.. . ::..::.:::.:: .:::..
CCDS43 NNKRQDFRQLLMGMADKNIQYYEKCLMAWESIIPLLQEKQEAK
400 410 420 430
>>CCDS3032.1 SNX4 gene_id:8723|Hs108|chr3 (450 aa)
initn: 279 init1: 113 opt: 330 Z-score: 368.4 bits: 77.2 E(32554): 3.4e-14
Smith-Waterman score: 339; 25.7% identity (60.5% similar) in 296 aa overlap (29-312:55-345)
10 20 30 40 50
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESH-----VTTIETFITYR
:: . :.:.: :.. .. ::. .:
CCDS30 AGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEISVSEAEKRTGRNAMNMQETYTAYL
30 40 50 60 70 80
60 70 80 90 100
pF1KB6 IITKTSRGEFDSSEFE--VRRRYQDFLWLKGKLEEAHPTLIIPPLPEK---FIVKGM-VE
: :.. . .: . . :::..: :.. : .: ...:::::: :. . . ..
CCDS30 IETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSAD
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB6 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQA-WELSSHKKQGPGLLSRMG
.. ::.: :: .:..:: :::.:: : .. : .::: .. :. . .. :. .
CCDS30 NMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNET---GFQLKAD
150 160 170 180 190 200
170 180 190 200 210 220
pF1KB6 QTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGP
. ..:. ...: ::: ..: ..... . ... :. . .. :. . . .::
CCDS30 SRLKALNATFR-VKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGR
210 220 230 240 250 260
230 240 250 260 270 280
pF1KB6 IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMK
. ::: :... : :.... .: .. . . : ..::..:.: : .: .
CCDS30 VFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILED-EEHYADQLKEYLFYAEALRAVCR
270 280 290 300 310
290 300 310 320 330 340
pF1KB6 RRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
... .: .:. .. :. :: . . :
CCDS30 KHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLE
320 330 340 350 360 370
>>CCDS32268.1 SNX1 gene_id:6642|Hs108|chr15 (457 aa)
initn: 213 init1: 109 opt: 313 Z-score: 349.6 bits: 73.7 E(32554): 3.7e-13
Smith-Waterman score: 325; 23.4% identity (56.2% similar) in 397 aa overlap (7-371:63-450)
10 20 30
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITV
. ..: . : : :. :.. . .:::
CCDS32 EPEAGDSDTEGEDIFTGAAVVSKHQSPKITTSLLPINNGSKENGIHEEQDQEPQDLFAG-
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB6 DEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIP
......:.. :.:: : :..: :.::..::: : :: : : .:.:
CCDS32 -------DGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVP
100 110 120 130 140
100 110 120 130 140
pF1KB6 PLPEKFIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQ
: ::: .. :: :. ..: :.: :: ::...:.::..:::. . : . :: .
CCDS32 PPPEKSLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKE
150 160 170 180 190 200
150 160 170 180 190 200
pF1KB6 AWE--LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDK
.... .: :::. ..... ::.. ... : : . .: :.. .
CCDS32 ELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHA
210 220 230 240 250 260
210 220 230 240 250 260
pF1KB6 ISQRIYKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGL
. . . ....: . ... . ..::.. : .:...: .. . ... ..
CCDS32 VVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANND
270 280 290 300 310 320
270 280 290 300 310
pF1KB6 SEALLPVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGK
: .. .:. .. ... .: . : :... . ..:.. :: :... .
CCDS32 FFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQ
330 340 350 360 370 380
320 330 340 350 360
pF1KB6 LEDKV---ECANNALKADWERWKQNMQNDI----KLAFTDMAEENIHYYE------QCLA
.:.. : . . :.:: . ..... : :. .. :.: : : ::
CCDS32 AKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLA
390 400 410 420 430 440
370 380
pF1KB6 T-WESFLTSQTNLHLEEASEDKP
::.::
CCDS32 KYWEAFLPEAKAIS
450
>>CCDS64234.1 SNX2 gene_id:6643|Hs108|chr5 (402 aa)
initn: 327 init1: 163 opt: 307 Z-score: 343.8 bits: 72.4 E(32554): 7.9e-13
Smith-Waterman score: 355; 24.6% identity (58.7% similar) in 341 aa overlap (20-346:13-348)
10 20 30 40 50 60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
.:. : . :. :. : :..::. ......::. ::::
CCDS64 MSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSL
10 20 30 40 50
70 80 90 100 110
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMV-------ERFND
. :..::: :.::..::: :..:: : :.:: ::: :: ::. . .
CCDS64 SMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIV-GMTKVKVGKEDSSST
60 70 80 90 100 110
120 130 140 150 160
pF1KB6 DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--LSSHKKQGPGLLSRMGQTV
.:.: :: ::...:.: . :::: . :.. :: .. .... .: :.: .....
CCDS64 EFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAA
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 RAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHI
:: . ... : : .. .: ..:.. . . . ...: . ..
CCDS64 DAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAA
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 LWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKR
. . ::. : .:...: .. . ... . . .. .:. . ::. .
CCDS64 MLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDH
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 RDQI-QAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
: . : :... .: ..:.. .. ... ::.. :.: .. .:: :. . :..
CCDS64 RMKCWQKWEDAQITLLKKREAEAKMM---VANKPDKIQQAKNEIR-EWEAKVQQGERDFE
300 310 320 330 340
350 360 370 380
pF1KB6 LAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
CCDS64 QISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
350 360 370 380 390 400
>>CCDS34217.1 SNX2 gene_id:6643|Hs108|chr5 (519 aa)
initn: 327 init1: 163 opt: 307 Z-score: 342.2 bits: 72.5 E(32554): 9.7e-13
Smith-Waterman score: 355; 24.6% identity (58.7% similar) in 341 aa overlap (20-346:130-465)
10 20 30 40
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETF
.:. : . :. :. : :..::. ....
CCDS34 VTPVTPTTLIAPRIESKSMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAY
100 110 120 130 140 150
50 60 70 80 90 100
pF1KB6 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMV-
..::. :::: . :..::: :.::..::: :..:: : :.:: ::: :: ::.
CCDS34 MAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIV-GMTK
160 170 180 190 200 210
110 120 130 140 150
pF1KB6 ------ERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--LSSHKKQG
. . .:.: :: ::...:.: . :::: . :.. :: .. .... .:
CCDS34 VKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSG
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB6 PGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF
:.: ..... :: . ... : : .. .: ..:.. . . . ...:
CCDS34 AGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKELS
280 290 300 310 320 330
220 230 240 250 260 270
pF1KB6 DEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVL
. .. . . ::. : .:...: .. . ... . . .. .:.
CCDS34 ANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIR
340 350 360 370 380 390
280 290 300 310 320 330
pF1KB6 YSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWE
. ::. .: . : :... .: ..:.. .. ... ::.. :.: .. .::
CCDS34 LIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMM---VANKPDKIQQAKNEIR-EWE
400 410 420 430 440 450
340 350 360 370 380
pF1KB6 RWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
:. . :..
CCDS34 AKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPE
460 470 480 490 500 510
>>CCDS32266.1 SNX1 gene_id:6642|Hs108|chr15 (522 aa)
initn: 267 init1: 145 opt: 293 Z-score: 326.8 bits: 69.7 E(32554): 7e-12
Smith-Waterman score: 355; 23.5% identity (57.4% similar) in 392 aa overlap (12-371:125-515)
10 20 30 40
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPES
..: .... :.. : :: . . .::.
CCDS32 ELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEK
100 110 120 130 140 150
50 60 70 80 90
pF1KB6 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIPPLPEK
......:.. :.:: : :..: :.::..::: : :: : : .:.:: :::
CCDS32 IGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEK
160 170 180 190 200 210
100 110 120 130 140 150
pF1KB6 FIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--
.. :: :. ..: :.: :: ::...:.::..:::. . : . :: .
CCDS32 SLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
.... .: :::. ..... ::.. ... : : . .: :.. . . . .
CCDS32 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL
280 290 300 310 320 330
220 230 240 250 260
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALL
....: . ... . ..::.. : .:...: .. . ... .. :
CCDS32 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB6 PVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGKLEDKV
.. .:. .. ... .: . : :... . ..:.. :: :... . .:..
CCDS32 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI
400 410 420 430 440 450
330 340 350 360
pF1KB6 ---ECANNALKADWERWKQNMQNDI----KLAFTDMAEENIHYYE------QCLAT-WES
: . . :.:: . ..... : :. .. :.: : : :: ::.
CCDS32 LEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEA
460 470 480 490 500 510
370 380
pF1KB6 FLTSQTNLHLEEASEDKP
::
CCDS32 FLPEAKAIS
520
>>CCDS58371.1 SNX1 gene_id:6642|Hs108|chr15 (557 aa)
initn: 267 init1: 145 opt: 293 Z-score: 326.4 bits: 69.7 E(32554): 7.4e-12
Smith-Waterman score: 346; 22.4% identity (58.1% similar) in 384 aa overlap (12-374:125-504)
10 20 30 40
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPES
..: .... :.. : :: . . .::.
CCDS58 ELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEK
100 110 120 130 140 150
50 60 70 80 90
pF1KB6 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIPPLPEK
......:.. :.:: : :..: :.::..::: : :: : : .:.:: :::
CCDS58 IGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEK
160 170 180 190 200 210
100 110 120 130 140 150
pF1KB6 FIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--
.. :: :. ..: :.: :: ::...:.::..:::. . : . :: .
CCDS58 SLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA
220 230 240 250 260 270
160 170 180 190 200 210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
.... .: :::. ..... ::.. ... : : . .: :.. . . . .
CCDS58 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL
280 290 300 310 320 330
220 230 240 250 260
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALL
....: . ... . ..::.. : .:...: .. . ... .. :
CCDS58 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA
340 350 360 370 380 390
270 280 290 300 310 320
pF1KB6 PVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGKLEDKV
.. .:. .. ... .: . : :... . ..:.. :: :... . .:..
CCDS58 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI
400 410 420 430 440 450
330 340 350 360 370 380
pF1KB6 ---ECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLE
: . . :.:: . ..... . : :.. . .. . :..: ::
CCDS58 LEWESRVTQYERDFERISTVVRKEV-IRFEK--EKSKDFKNHVIKYLETLLYSQQQAGEQ
460 470 480 490 500 510
pF1KB6 EASEDKP
CCDS58 LGIRSGILLTKKLPRYSKFFSTVHKFCAAASLWKWGFFLSAYLSYLF
520 530 540 550
387 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:20:03 2016 done: Sat Nov 5 04:20:03 2016
Total Scan time: 2.740 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]