Result of FASTA (ccds) for
pFN21AE0810
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0810, 305 aa
1>>>pF1KE0810 305 - 305 aa - 305 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5688+/-0.00143; mu= 14.7292+/- 0.084
mean_var=103.8159+/-24.408, 0's: 0 Z-trim(100.4): 187 B-trim: 0 in 0/46
Lambda= 0.125876
statistics sampled from 5872 (6080) to 5872 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.504), E-opt: 0.2 (0.187), width: 16
Scan time: 2.030
The best scores are: opt bits E(32554)
CCDS5451.1 GPR141 gene_id:353345|Hs108|chr7 ( 305) 2019 378.0 5.1e-105
CCDS14439.1 CYSLTR1 gene_id:10800|Hs108|chrX ( 337) 363 77.3 1.8e-14
CCDS14258.1 GPR34 gene_id:2857|Hs108|chrX ( 381) 335 72.2 6.8e-13
CCDS3157.1 GPR87 gene_id:53836|Hs108|chr3 ( 358) 327 70.8 1.8e-12
CCDS9491.1 GPR18 gene_id:2841|Hs108|chr13 ( 331) 322 69.8 3.2e-12
CCDS9410.1 LPAR6 gene_id:10161|Hs108|chr13 ( 344) 305 66.7 2.8e-11
CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 ( 346) 305 66.7 2.8e-11
CCDS9482.1 OXGR1 gene_id:27199|Hs108|chr13 ( 337) 302 66.2 4e-11
CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2 ( 367) 302 66.2 4.2e-11
CCDS9666.1 SSTR1 gene_id:6751|Hs108|chr14 ( 391) 302 66.2 4.4e-11
CCDS3156.1 P2RY14 gene_id:9934|Hs108|chr3 ( 338) 297 65.3 7.5e-11
CCDS3155.1 GPR171 gene_id:29909|Hs108|chr3 ( 319) 296 65.1 8.2e-11
>>CCDS5451.1 GPR141 gene_id:353345|Hs108|chr7 (305 aa)
initn: 2019 init1: 2019 opt: 2019 Z-score: 1998.9 bits: 378.0 E(32554): 5.1e-105
Smith-Waterman score: 2019; 100.0% identity (100.0% similar) in 305 aa overlap (1-305:1-305)
10 20 30 40 50 60
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGVISILFLLVKMNTRSVTTMAVINLVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGVISILFLLVKMNTRSVTTMAVINLVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 VHSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRYLIFFKC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VHSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRYLIFFKC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 KDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNEEHCFKFHKELAYTYVKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNEEHCFKFHKELAYTYVKI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 INYMIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQEFWAQLKNLFFIGVILVCFLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 INYMIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQEFWAQLKNLFFIGVILVCFLP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 YQFFRIYYLNVVTHSNACNSKVAFYNEIFLSVTAISCYDLLLFVFGGSHWFKQKIIGLWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YQFFRIYYLNVVTHSNACNSKVAFYNEIFLSVTAISCYDLLLFVFGGSHWFKQKIIGLWN
250 260 270 280 290 300
pF1KE0 CVLCR
:::::
CCDS54 CVLCR
>>CCDS14439.1 CYSLTR1 gene_id:10800|Hs108|chrX (337 aa)
initn: 78 init1: 48 opt: 363 Z-score: 373.1 bits: 77.3 E(32554): 1.8e-14
Smith-Waterman score: 363; 22.8% identity (66.1% similar) in 307 aa overlap (3-295:5-306)
10 20 30 40 50
pF1KE0 MPGHNTSRNSSC----DPIVTPHLISLYFIVLIGGLVGVISILFLLVK-MNTRSVTTM
:. : ...: : . . .:: .. . :. : .:..:.: .. .:. .
CCDS14 MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 AVINLVVVHSVFLLTVPFRLTYLIKK-TWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVT
.:::.:. . . :.:.:..: ..: :.:: .:.. . :....: ...:....
CCDS14 YMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 RYL-IFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNEEHCFKFHK
: . : : .. ... . .: . .:.: .::. :..... ..: :. .::. .
CCDS14 RCIAIVFPVQN-INLVTQKKARFVCVGIWIFVILTSSPFLMAK-PQKDEKNNTKCFEPPQ
130 140 150 160 170
180 190 200 210 220
pF1KE0 E-LAYTYVKIINY--MIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQEFWAQLKNL
. . ..: ...: ..: :.: ..:.. . ..:. :. ......: ::.. ... .
CCDS14 DNQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKKSMKKNLSSHKKAIGMI--M
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE0 FFIGVILVCFLPYQFFRIYYLNVV-THSNACNSKVAFYNEIFLSVT-AIS--CYDLLLFV
...:: :.::.. : .:. . .... :.: . . . . .... : : :.: ::.
CCDS14 VVTAAFLVSFMPYHIQRTIHLHFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPLLYF
240 250 260 270 280 290
290 300
pF1KE0 FGGSHWFKQKIIGLWNCVLCR
:.:.. :....
CCDS14 FSGGN-FRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV
300 310 320 330
>>CCDS14258.1 GPR34 gene_id:2857|Hs108|chrX (381 aa)
initn: 141 init1: 67 opt: 335 Z-score: 344.9 bits: 72.2 E(32554): 6.8e-13
Smith-Waterman score: 335; 21.7% identity (61.2% similar) in 304 aa overlap (2-289:33-333)
10 20
pF1KE0 MPGHNTSRN---SSC---DPIVTPHLISLYF
: .: : . ..: . ... : . :
CCDS14 SHTITMTTTSVSSWPYSSHRMRFITNHSDQPPQNFSATPNVTTCPMDEKLLSTVLTTSYS
10 20 30 40 50 60
30 40 50 60 70 80
pF1KE0 IVLIGGLVGVISILFLLVKMNT-RSVTTMAVINLVVVHSVFLLTVPFRLTYLIKKT-WMF
...: :::: : :.... .. :. . ..:.... .... .:::. : :... : .
CCDS14 VIFIVGLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLIFCLPFRIMYHINQNKWTL
70 80 90 100 110 120
90 100 110 120 130 140
pF1KE0 GLPFCKFVSAMLHIHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLV
:. .:: :.......::..... : . ::. . . .. . ... . .: :.
CCDS14 GVILCKVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCIVWMLA
130 140 150 160 170 180
150 160 170 180 190
pF1KE0 IVIVVPLVVS--RYGIHEEYNEEHCFKFHKELAYTYVKIINYMIVI--FVIAVAVILLVF
. . ... . : : : ::... . :.:...:. ..: . .:: .
CCDS14 LGGFLTMIILTLKKGGH---NSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYI
190 200 210 220 230
200 210 220 230 240 250
pF1KE0 QVFIIMLMVQKLRHSLLSHQEFWAQLKNLFFIGVIL-VCFLPYQFFRIYYLNVVTHSNAC
.. .: ..: : .. . .. . .: :.. .:. .::.::. ::. :.. . ..:
CCDS14 KIGKNLLRISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQLNVSSC
240 250 260 270 280 290
260 270 280 290 300
pF1KE0 NSKVAFY--NEIFLSVTAI-SCYDLLLFVFGGSHWFKQKIIGLWNCVLCR
: . :::.: .... :: : ... . .:.
CCDS14 YWKEIVHKTNEIMLVLSSFNSCLDPVMYFLMSSNIRKIMCQLLFRRFQGEPSRSESTSEF
300 310 320 330 340 350
CCDS14 KPGYSLHDTSVAVKIQSSSKST
360 370 380
>>CCDS3157.1 GPR87 gene_id:53836|Hs108|chr3 (358 aa)
initn: 250 init1: 97 opt: 327 Z-score: 337.4 bits: 70.8 E(32554): 1.8e-12
Smith-Waterman score: 327; 24.5% identity (59.2% similar) in 294 aa overlap (2-285:30-316)
10 20 30
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGL
::.::. .. : :: : ::.:......
CCDS31 MGFNLTLAKLPNNELHGQESHNSGNRSDGPGKNTTLHNEFDTIVLP---VLYLIIFVASI
10 20 30 40 50
40 50 60 70 80
pF1KE0 V--GVISILFLLVKMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYLIK-KTWMFGLPFCK
. :. .:. .. .: . . :.::. .. :: :::... :.: . .:.
CCDS31 LLNGLAVWIFFHIRNKTSFIFYLK--NIVVADLIMTLTFPFRIVHDAGFGPWYFKFILCR
60 70 80 90 100 110
90 100 110 120 130 140
pF1KE0 FVSAMLHIHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVP
..:.... .:: ...: .: . ::: : ..: . . :. .:... :. .:
CCDS31 YTSVLFYANMYTSIVFLGLISIDRYLKVVKPFGDSRMYSITFTKVLSVCVWVIMAVLSLP
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE0 LVVSRYGIHEEYNEEHCFKFHKELAYTYVKIINYMIVIFVIAVAVILLVFQVFIIMLMVQ
.. : : : . : :... :. . ..:. . .:: :::. . : . .
CCDS31 NIILTNGQPTEDNIHDCSKLKSPLGVKWHTAVTYVNSCLFVAVLVILIGCYIAISRYIHK
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE0 KLRHSLLSHQEFWAQLKNL-FFIGVILVCFLPYQFFRIYY----LNVVTHSNACNSKVAF
. :. . . .. . ... ..:...:::::.. :: . :. . .: .:. .
CCDS31 SSRQFISQSSRKRKHNQSIRVVVAVFFTCFLPYHLCRIPFTFSHLDRLLDESA--QKILY
240 250 260 270 280 290
270 280 290 300
pF1KE0 Y-NEIFLSVTAIS-CYDLLLFVFGGSHWFKQKIIGLWNCVLCR
: .:: : ..: . : : ... :
CCDS31 YCKEITLFLSACNVCLDPIIYFFMCRSFSRRLFKKSNIRTRSESIRSLQSVRRSEVRIYY
300 310 320 330 340 350
>>CCDS9491.1 GPR18 gene_id:2841|Hs108|chr13 (331 aa)
initn: 274 init1: 235 opt: 322 Z-score: 332.9 bits: 69.8 E(32554): 3.2e-12
Smith-Waterman score: 322; 22.9% identity (58.6% similar) in 292 aa overlap (9-298:14-300)
10 20 30 40 50
pF1KE0 MPGHNTSRNSSC-DPIVTPHLISLYFIVLIGGLVGVISILFLLVKMNTRSVTTMA
::: : :. : .:: .:.. .. . . :...:.
CCDS94 MITLNNQDQPVPFNSSHPDEYKIAALVFYSCIFIIGLFVNITALWVFSCTTKKRTTVTIY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 VINLVVVHSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRY
..:...: .:..:.:::. : : : :: ::....:. .. ... . . : . ::
CCDS94 MMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILGALTVFYPSIALWLLAFISADRY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 LIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNEEHCFKFHKELA
. . . : :. .:: : .:.: .... ..::.. .. . :.:. .
CCDS94 MAIVQPKYAKELKNTCKAVLACVGVWIMTLTTTTPLLLLYKDPDKDSTPATCLKISDIIY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 YTYVKIINYMIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQEFWAQLKNLFFIGV-
:...: . : . . ..... ..:. . . : : :. . ... .. . :
CCDS94 LKAVNVLNLTRLTFFFLIPLFIMIGCYLVIIHNLLHGRTSKLKPKVKEKSIRIIITLLVQ
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 ILVCFLPYQFFRIYYLNVVTHSNACNSKVAFYNEIFLSVTAISCYDLLLFVFGGSHWFKQ
.::::.:... . .: . : :. : :: . :: .. .: :..:. . :. :.
CCDS94 VLVCFMPFHIC-FAFLMLGTGENSYNPWGAFTT--FL-MNLSTCLDVILY-YIVSKQFQA
250 260 270 280 290
300
pF1KE0 KIIGLWNCVLCR
..:..
CCDS94 RVISVMLYRNYLRSMRRKSFRSGSLRSLSNINSEML
300 310 320 330
>>CCDS9410.1 LPAR6 gene_id:10161|Hs108|chr13 (344 aa)
initn: 235 init1: 196 opt: 305 Z-score: 316.0 bits: 66.7 E(32554): 2.8e-11
Smith-Waterman score: 305; 27.7% identity (61.9% similar) in 278 aa overlap (23-285:23-293)
10 20 30 40 50
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVG-VISILFLLVKMNTRSVTTMAVINLV
.. .:.. ::.. ..: ... ...:. :: .:::.
CCDS94 MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVRNETTTYMINLA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 VVHSVFLLTVPFRLTYLIKKTWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRYL-IFF
. .:..:.:::. :. ..: :: .::. ... .:: ..:: . : : :.: : .
CCDS94 MSDLLFVFTLPFRIFYFTTRNWPFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 KCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNE--EHCFKFHKELAY-
:.:. . : .: . .:.: :: .: : . . : . :. : ::. : ..
CCDS94 PFKSKT-LRTKRNAKIVCTGVWLTVIGGSAPAVFVQ-STHSQGNNASEACFENFPEATWK
130 140 150 160 170
180 190 200 210 220 230
pF1KE0 TYVKIINYMIVIFVIAVAVIL-LVFQVFIIMLMVQKLRHSL-LSHQEF-WAQLKNLFFIG
::.. ::::. :. .. :...: .... : . . ::.... ... ...:.
CCDS94 TYLS----RIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFVH
180 190 200 210 220 230
240 250 260 270 280
pF1KE0 VILVCF--LPYQFFRIYYLNVVTHSNACNSKVAFYNEIF---LSVTAIS--CYDLLLFVF
.:. :: .::.. : : : :.. . : :: .. : . :.: :.: ... :
CCDS94 LIIFCFCFVPYNINLILYSLVRTQTFVNCSVVAAVRTMYPITLCI-AVSNCCFDPIVYYF
240 250 260 270 280 290
290 300
pF1KE0 GGSHWFKQKIIGLWNCVLCR
CCDS94 TSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA
300 310 320 330 340
>>CCDS9412.1 CYSLTR2 gene_id:57105|Hs108|chr13 (346 aa)
initn: 205 init1: 104 opt: 305 Z-score: 316.0 bits: 66.7 E(32554): 2.8e-11
Smith-Waterman score: 305; 23.2% identity (61.4% similar) in 306 aa overlap (4-295:25-316)
10 20 30
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGV-ISI
.:.::: . . . . .:.:... :..: .::
CCDS94 MERKFMSLQPSISVSEMEPNGTFSNNNSRNCTIENFKREFFPIVYLIIFFWGVLGNGLSI
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 LFLLVKMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYLIKKT-WMFGLPFCKFVSAMLHI
.: .. . ... ..::.. .:. :.::: : .. . :.:: :...: :..
CCDS94 YVFLQPYKKSTSVNVFMLNLAISDLLFISTLPFRADYYLRGSNWIFGDLACRIMSYSLYV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 HMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGI
.:: .. : .:. :.:.: . :. .: :: :.. . : : .: . ...: .
CCDS94 NMYSSIYFLTVLSVVRFLAM------VHPFRLLH-VTSIRSAWILCGIIWILIMASSIML
130 140 150 160 170
160 170 180 190 200
pF1KE0 HEEYNEEH-----C-----FKFHKELAYTYVK-IINYMIVIFVIAVAVILLVFQVFIIML
. .:.. : .:. : ...:. ... .. .:.... .:.. .. . .
CCDS94 LDSGSEQNGSVTSCLELNLYKIAKLQTMNYIALVVGCLLPFFTLSICYLLIIRVLLKVEV
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE0 MVQKLRHSLLSHQEFWAQLKNLFFIGVILVCFLPYQFFRIYYLNVVTHSNACNSKVAFYN
. :: .::.. : .. . ....:::::. .: .:.. . . :....
CCDS94 PESGLR---VSHRK--ALTTIIITLIIFFLCFLPYHTLRTVHLTTW-KVGLCKDRLHKAL
240 250 260 270 280
270 280 290 300
pF1KE0 EIFLSVTAIS-CYDLLLFVFGGSHWFKQKIIGLWNCVLCR
: :...: . :.. ::. :.: . ::...
CCDS94 VITLALAAANACFNPLLYYFAGEN-FKDRLKSALRKGHPQKAKTKCVFPVSVWLRKETRV
290 300 310 320 330 340
>>CCDS9482.1 OXGR1 gene_id:27199|Hs108|chr13 (337 aa)
initn: 234 init1: 145 opt: 302 Z-score: 313.2 bits: 66.2 E(32554): 4e-11
Smith-Waterman score: 302; 21.2% identity (59.3% similar) in 297 aa overlap (14-301:30-319)
10 20 30 40
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVG-VISILFLLV
:. .: .: :... :. : .. : .
CCDS94 MNEPLDYLANASDFPDYAAAFGNCTDENIPLKMHYLPVIYGIIFLVGFPGNAVVISTYIF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 KMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYLIK-KTWMFGLPFCKFVSAMLHIHMYLT
:: . .:. ..::. . ..: ..:: . : . ..:.:: .:::. .:...: .
CCDS94 KMRPWKSSTIIMLNLACTDLLYLTSLPFLIHYYASGENWIFGDFMCKFIRFSFHFNLYSS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 FLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYN
.:: . . . :: .... . ... ::.: : .: . .: :.:.. . .. :
CCDS94 ILFLTCFSIFRYCVIIHPMSCFSIHKTRCAVVACAVVWIISLVAVIPMTFLITSTNRT-N
130 140 150 160 170
170 180 190 200 210 220
pF1KE0 EEHCFKFHKELAYTYVKIINYMIVI--FVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQE
. :. . . . .: : ... : . .... : . . ... : :.: . .
CCDS94 RSACLDLTSSDELNTIKWYNLILTATTFCLPLVIVTLCYTT-----IIHTLTHGLQTDSC
180 190 200 210 220 230
230 240 250 260 270
pF1KE0 FWAQLKNL--FFIGVILVCFLPYQFFRIYYLNVVTHSNACNSKVAFYNEIFLS--VTAIS
. . . : ... .. :::::....:. .. : .:. . ... ..: ..:..
CCDS94 LKQKARRLTILLLLAFYVCFLPFHILRVIRIESRLLSISCSIENQIHEAYIVSRPLAALN
240 250 260 270 280 290
280 290 300
pF1KE0 CY-DLLLFVFGGSHWFKQKIIGLWNCVLCR
. .:::.: ... :.: . . :
CCDS94 TFGNLLLYVVVSDN-FQQAVCSTVRCKVSGNLEQAKKISYSNNP
300 310 320 330
>>CCDS2148.1 GPR17 gene_id:2840|Hs108|chr2 (367 aa)
initn: 179 init1: 142 opt: 302 Z-score: 312.7 bits: 66.2 E(32554): 4.2e-11
Smith-Waterman score: 302; 24.6% identity (63.0% similar) in 281 aa overlap (14-285:56-327)
10 20 30 40
pF1KE0 MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGVISILFLLV
:. . . :.:.. .: .::: :.:..
CCDS21 SQSMNGLEVAPPGLITNFSLATAEQCGQETPLENMLFASFYLLDFILALVGNTLALWLFI
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE0 KMNTRSVTTMAV--INLVVVHSVFLLTVPFRLTYLIKKT-WMFGLPFCKFVSAMLHIHMY
. . .: : : ..:.:. .:..: ::.: .. . : :: :.... .....::
CCDS21 R-DHKSGTPANVFLMHLAVADLSCVLVLPTRLVYHFSGNHWPFGEIACRLTGFLFYLNMY
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE0 LTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEE
.. : . : . :.: . . .... : :.: : : .:..: : ..::.:: .. .
CCDS21 ASIYFLTCISADRFLAIVHPVKSLKLRRPLYAHLACAFLWVVVAVAMAPLLVSPQTVQTN
150 160 170 180 190 200
170 180 190 200 210 220
pF1KE0 YNEEHCFKFHKELAYTYVKIINYMIVIFVIAVAVILLVFQVFIIMLMVQKLRHSLLSHQE
.. :.....: : .. .: ...: . . . : .:....::..: ...
CCDS21 HTVV-CLQLYRE------KASHHALVSLAVAFTFPF-ITTVTCYLLIIRSLRQGLRVEKR
210 220 230 240 250
230 240 250 260 270
pF1KE0 FWAQLKNLFFI--GVILVCFLPYQFFR-IYYLNVVTHSNACNSK--VAFYNEIFLSVTAI
. .. .. : ...::::.::. : .: :. .:. .: .. .:. :.: .:..
CCDS21 LKTKAVRMIAIVLAIFLVCFVPYHVNRSVYVLHYRSHGASCATQRILALANRITSCLTSL
260 270 280 290 300 310
280 290 300
pF1KE0 S-CYDLLLFVFGGSHWFKQKIIGLWNCVLCR
. : ... :
CCDS21 NGALDPIMYFFVAEKFRHALCNLLCGKRLKGPPPSFEGKTNESSLSAKSEL
320 330 340 350 360
>>CCDS9666.1 SSTR1 gene_id:6751|Hs108|chr14 (391 aa)
initn: 194 init1: 194 opt: 302 Z-score: 312.4 bits: 66.2 E(32554): 4.4e-11
Smith-Waterman score: 302; 23.9% identity (60.7% similar) in 318 aa overlap (2-299:41-342)
10 20
pF1KE0 MPGHNTSRNSS-CDPIVTPHLIS-LYFIVLI
::.:.:.:.. . . ::: .: .: .
CCDS96 SSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRNASQNGTLSEGQGSAILISFIYSVVCL
20 30 40 50 60 70
30 40 50 60 70 80
pF1KE0 GGLVGVISILFLLVKM-NTRSVTTMAVINLVVVHSVFLLTVPFRLTYLIKKTWMFGLPFC
:: : ........ . ...:.. ..::... ...:.::: .: . . : :: .:
CCDS96 VGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSVPFLVTSTLLRHWPFGALLC
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE0 KFVSAMLHIHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVV
..: .. ..:. .. .:. : ::. . ... : : ... :.:.: .....
CCDS96 RLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLLVIL
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 PLVV-SRYGIHEEYNEEHCFKFHKELAYTY-VKIINYMIVI-FVIAVAVILLVFQVFIIM
:.:: :: . . . . : . : : . : .. : ... :.. :..: : . .
CCDS96 PIVVFSRTAANSD-GTVACNMLMPEPAQRWLVGFVLYTFLMGFLLPVGAICLCY-----V
200 210 220 230 240
210 220 230 240 250
pF1KE0 LMVQKLRHSLLSHQEFWAQLKN---------LFFIGVILVCFLPYQFFRIYYLNVVT-HS
:.. :.: ... . : : : .. . :...:..: :. . .:: . ..
CCDS96 LIIAKMR--MVALKAGWQQRKRSERKITLMVMMVVMVFVICWMP--FYVVQLVNVFAEQD
250 260 270 280 290 300
260 270 280 290 300
pF1KE0 NACNSKVAFYNEIFLSVTAISCYDLLLFVFGGSHWFK---QKIIGL-WNCVLCR
.: :... ..:. : :: . .:. : ... :: :.:. : :
CCDS96 DATVSQLS----VILGY-ANSCANPILYGFLSDN-FKRSFQRILCLSWMDNAAEEPVDYY
310 320 330 340 350
CCDS96 ATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL
360 370 380 390
305 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 03:17:08 2016 done: Sat Nov 5 03:17:09 2016
Total Scan time: 2.030 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]