FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4117, 494 aa 1>>>pF1KE4117 494 - 494 aa - 494 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6258+/-0.00103; mu= 11.4543+/- 0.061 mean_var=100.4607+/-20.300, 0's: 0 Z-trim(106.2): 100 B-trim: 155 in 1/48 Lambda= 0.127961 statistics sampled from 8753 (8860) to 8753 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.649), E-opt: 0.2 (0.272), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS7454.2 ARHGAP19 gene_id:84986|Hs108|chr10 ( 494) 3227 606.6 1.9e-173 CCDS58092.1 ARHGAP19 gene_id:84986|Hs108|chr10 ( 485) 3109 584.8 6.8e-167 CCDS73175.1 ARHGAP19 gene_id:84986|Hs108|chr10 ( 465) 1844 351.3 1.3e-96 >>CCDS7454.2 ARHGAP19 gene_id:84986|Hs108|chr10 (494 aa) initn: 3227 init1: 3227 opt: 3227 Z-score: 3227.3 bits: 606.6 E(32554): 1.9e-173 Smith-Waterman score: 3227; 99.6% identity (100.0% similar) in 494 aa overlap (1-494:1-494) 10 20 30 40 50 60 pF1KE4 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQENITKLNSGMAFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQENITKLNSGMAFM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 IKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 IKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL 430 440 450 460 470 480 490 pF1KE4 KWSEGKKEGKKAFV :::::::::::.:. CCDS74 KWSEGKKEGKKGFL 490 >>CCDS58092.1 ARHGAP19 gene_id:84986|Hs108|chr10 (485 aa) initn: 3109 init1: 3109 opt: 3109 Z-score: 3109.7 bits: 584.8 E(32554): 6.8e-167 Smith-Waterman score: 3109; 99.6% identity (100.0% similar) in 475 aa overlap (20-494:11-485) 10 20 30 40 50 60 pF1KE4 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL ::::::::::::::::::::::::::::::::::::::::: CCDS58 MPHQKLSALIDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE4 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQENITKLNSGMAFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQENITKLNSGMAFM 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE4 IKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 IKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE4 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE4 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL 420 430 440 450 460 470 490 pF1KE4 KWSEGKKEGKKAFV :::::::::::.:. CCDS58 KWSEGKKEGKKGFL 480 >>CCDS73175.1 ARHGAP19 gene_id:84986|Hs108|chr10 (465 aa) initn: 3036 init1: 1844 opt: 1844 Z-score: 1847.9 bits: 351.3 E(32554): 1.3e-96 Smith-Waterman score: 2978; 93.7% identity (94.1% similar) in 494 aa overlap (1-494:1-465) 10 20 30 40 50 60 pF1KE4 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNVTANDLQENITKLNSGMAFM :::::::::::::::::::::::::::::::::::::::: CCDS73 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN-------------------- 250 260 270 280 310 320 330 340 350 360 pF1KE4 IKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 ---------APAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCP 290 300 310 320 330 370 380 390 400 410 420 pF1KE4 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 HQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE4 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRL 400 410 420 430 440 450 490 pF1KE4 KWSEGKKEGKKAFV :::::::::::.:. CCDS73 KWSEGKKEGKKGFL 460 494 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:53:27 2016 done: Sun Nov 6 01:53:28 2016 Total Scan time: 2.860 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]