Result of FASTA (omim) for
pFN21AE0613
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0613, 172 aa
1>>>pF1KE0613 172 - 172 aa - 172 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0740+/-0.000299; mu= 14.5947+/- 0.019
mean_var=95.2140+/-22.570, 0's: 0 Z-trim(118.3): 608 B-trim: 2966 in 2/52
Lambda= 0.131439
statistics sampled from 30371 (31148) to 30371 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.365), width: 16
Scan time: 5.420
The best scores are: opt bits E(85289)
NP_001191150 (OMIM: 616348) zinc finger protein 69 ( 172) 1154 228.2 4.9e-60
NP_065127 (OMIM: 616348) zinc finger protein 695 i ( 515) 874 175.7 9.9e-44
NP_942596 (OMIM: 600398) zinc finger protein 160 i ( 818) 287 64.6 4.3e-10
NP_001309065 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309064 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_150630 (OMIM: 600398) zinc finger protein 160 i ( 818) 287 64.6 4.3e-10
NP_001096073 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309058 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309063 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309062 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
XP_016882935 (OMIM: 600398) PREDICTED: zinc finger ( 818) 287 64.6 4.3e-10
NP_001309059 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309057 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309060 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
NP_001309061 (OMIM: 600398) zinc finger protein 16 ( 818) 287 64.6 4.3e-10
XP_016882934 (OMIM: 600398) PREDICTED: zinc finger ( 837) 287 64.6 4.4e-10
XP_016881888 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881885 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881889 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881882 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881886 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
NP_997216 (OMIM: 606427) zinc finger protein 320 [ ( 509) 266 60.4 5e-09
XP_016881883 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881887 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_006723122 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
XP_016881884 (OMIM: 606427) PREDICTED: zinc finger ( 509) 266 60.4 5e-09
NP_001008801 (OMIM: 616841) zinc finger protein 46 ( 522) 264 60.0 6.6e-09
XP_016882932 (OMIM: 616841) PREDICTED: zinc finger ( 541) 264 60.0 6.7e-09
NP_001264049 (OMIM: 616841) zinc finger protein 46 ( 127) 255 57.6 8.4e-09
NP_001309054 (OMIM: 600398) zinc finger protein 16 ( 147) 254 57.5 1.1e-08
XP_016882937 (OMIM: 600398) PREDICTED: zinc finger ( 147) 254 57.5 1.1e-08
NP_001309055 (OMIM: 600398) zinc finger protein 16 ( 147) 254 57.5 1.1e-08
XP_016882936 (OMIM: 600398) PREDICTED: zinc finger ( 166) 254 57.6 1.1e-08
NP_003432 (OMIM: 194648,615226) zinc finger protei ( 474) 256 58.4 1.8e-08
XP_016864080 (OMIM: 194648,615226) PREDICTED: zinc ( 534) 252 57.7 3.2e-08
XP_011511864 (OMIM: 194648,615226) PREDICTED: zinc ( 502) 244 56.2 8.9e-08
NP_001284553 (OMIM: 613910) zinc finger protein 48 ( 492) 243 56.0 1e-07
NP_115799 (OMIM: 615580) zinc finger protein 528 [ ( 628) 244 56.3 1e-07
NP_653285 (OMIM: 613910) zinc finger protein 480 i ( 535) 243 56.0 1.1e-07
XP_011524767 (OMIM: 613910) PREDICTED: zinc finger ( 535) 243 56.0 1.1e-07
XP_006723481 (OMIM: 615580) PREDICTED: zinc finger ( 712) 244 56.4 1.1e-07
XP_011525694 (OMIM: 615580) PREDICTED: zinc finger ( 712) 244 56.4 1.1e-07
NP_001287880 (OMIM: 603971) zinc finger protein 91 (1159) 245 56.8 1.4e-07
NP_003421 (OMIM: 603971) zinc finger protein 91 is (1191) 245 56.8 1.4e-07
XP_016881862 (OMIM: 603980) PREDICTED: zinc finger ( 86) 231 52.9 1.5e-07
NP_001316903 (OMIM: 603977) zinc finger protein 20 ( 112) 232 53.2 1.6e-07
NP_001316900 (OMIM: 603977) zinc finger protein 20 ( 140) 232 53.3 1.8e-07
NP_001316902 (OMIM: 603977) zinc finger protein 20 ( 141) 232 53.3 1.8e-07
NP_001316901 (OMIM: 603977) zinc finger protein 20 ( 163) 232 53.4 2e-07
NP_001243101 (OMIM: 603899) zinc finger protein 85 ( 87) 228 52.3 2.3e-07
>>NP_001191150 (OMIM: 616348) zinc finger protein 695 is (172 aa)
initn: 1154 init1: 1154 opt: 1154 Z-score: 1198.8 bits: 228.2 E(85289): 4.9e-60
Smith-Waterman score: 1154; 99.4% identity (100.0% similar) in 172 aa overlap (1-172:1-172)
10 20 30 40 50 60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_001 KPELIICLEARKEPWNVNTEKTAKHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
130 140 150 160 170
>>NP_065127 (OMIM: 616348) zinc finger protein 695 isofo (515 aa)
initn: 874 init1: 874 opt: 874 Z-score: 906.1 bits: 175.7 E(85289): 9.9e-44
Smith-Waterman score: 874; 99.2% identity (100.0% similar) in 130 aa overlap (1-130:1-130)
10 20 30 40 50 60
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHSLAMS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 KPELIICLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
:::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::
NP_065 KPELIICLEARKEPWNVNTEKTAKHSVLSSYLTEDILPEQGLQVSFQKVMLRRYERCCLE
70 80 90 100 110 120
130 140 150 160 170
pF1KE0 KLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
::::::::::
NP_065 KLRLRNDWEIVGEWKGQKASYNGLDLCSATTHSKNFQCNKCVKGFSKFANLNKCKISHTG
130 140 150 160 170 180
>>NP_942596 (OMIM: 600398) zinc finger protein 160 isofo (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_942 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_942 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_942 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001309065 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001309064 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_150630 (OMIM: 600398) zinc finger protein 160 isofo (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_150 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_150 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_150 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001096073 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001309058 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001309063 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
>>NP_001309062 (OMIM: 600398) zinc finger protein 160 is (818 aa)
initn: 283 init1: 246 opt: 287 Z-score: 302.1 bits: 64.6 E(85289): 4.3e-10
Smith-Waterman score: 287; 39.2% identity (68.0% similar) in 125 aa overlap (4-125:8-132)
10 20 30 40 50
pF1KE0 MGLLAFRDVALEFSPEEWECLDPAQRSLYRDVMLENYRNLISLGEDSFNMQFLFHS
:.:::::.::: :::.::::::: :::::::::: ::.::: :.:...
NP_001 MALTQVRLTFRDVAIEFSQEEWKCLDPAQRILYRDVMLENYWNLVSLGLCHFDMNIISML
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 LAMSKPELII-CLEARKEPWNVNTEKTARHSVLSSYLTEDILPEQ--GLQVSFQKVMLRR
..: . :.. ..: . . : . .. . .:.::.. . .. :. :.:.:
NP_001 EEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEKSSTEAVFHTVVLER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 YERCCLEKLRLRNDWEIPCEDVLASPLPSAMILSFLRPPQKQKHVKPTEPVQSSTIELL
.: .: . ..
NP_001 HESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKLMNNQ
130 140 150 160 170 180
172 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:24:30 2016 done: Wed Nov 2 20:24:31 2016
Total Scan time: 5.420 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]