Result of FASTA (omim) for
pFN21AE0608
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0608, 359 aa
1>>>pF1KE0608 359 - 359 aa - 359 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.7565+/-0.000349; mu= 9.1976+/- 0.022
mean_var=110.9696+/-22.175, 0's: 0 Z-trim(117.0): 165 B-trim: 27 in 1/55
Lambda= 0.121751
statistics sampled from 28360 (28562) to 28360 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.708), E-opt: 0.2 (0.335), width: 16
Scan time: 9.000
The best scores are: opt bits E(85289)
NP_004279 (OMIM: 604448) cytohesin-interacting pro ( 359) 2358 425.0 1.3e-118
XP_016860875 (OMIM: 604448) PREDICTED: cytohesin-i ( 253) 1669 303.9 2.6e-82
NP_859062 (OMIM: 612027) general receptor for phos ( 395) 542 106.0 1.5e-22
XP_005268748 (OMIM: 612027) PREDICTED: general rec ( 265) 408 82.4 1.3e-15
XP_011536298 (OMIM: 612027) PREDICTED: general rec ( 265) 408 82.4 1.3e-15
NP_001258785 (OMIM: 612027) general receptor for p ( 252) 332 69.0 1.3e-11
NP_001188255 (OMIM: 603831) Na(+)/H(+) exchange re ( 408) 178 42.1 0.0027
XP_011507921 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 409) 178 42.1 0.0027
XP_016856954 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 409) 178 42.1 0.0027
XP_016856955 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 409) 178 42.1 0.0027
XP_011507920 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 508) 178 42.1 0.0032
XP_011507918 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 512) 178 42.1 0.0032
XP_016856953 (OMIM: 603831) PREDICTED: Na(+)/H(+) ( 519) 178 42.1 0.0033
NP_002605 (OMIM: 603831) Na(+)/H(+) exchange regul ( 519) 178 42.1 0.0033
NP_001188254 (OMIM: 603831) Na(+)/H(+) exchange re ( 519) 178 42.1 0.0033
NP_055831 (OMIM: 612258) microtubule-associated se (1309) 184 43.4 0.0034
XP_006722763 (OMIM: 612258) PREDICTED: microtubule (1314) 184 43.4 0.0034
XP_005259884 (OMIM: 612258) PREDICTED: microtubule (1315) 184 43.4 0.0034
XP_016881999 (OMIM: 612258) PREDICTED: microtubule (1403) 184 43.5 0.0036
XP_016882005 (OMIM: 612258) PREDICTED: microtubule (1409) 184 43.5 0.0036
XP_016881998 (OMIM: 612258) PREDICTED: microtubule (1410) 184 43.5 0.0036
XP_016882004 (OMIM: 612258) PREDICTED: microtubule (1243) 180 42.7 0.0052
XP_016882003 (OMIM: 612258) PREDICTED: microtubule (1243) 180 42.7 0.0052
XP_006722761 (OMIM: 612258) PREDICTED: microtubule (1243) 180 42.7 0.0052
XP_016882002 (OMIM: 612258) PREDICTED: microtubule (1317) 180 42.7 0.0055
XP_016882001 (OMIM: 612258) PREDICTED: microtubule (1318) 180 42.7 0.0055
XP_005259883 (OMIM: 612258) PREDICTED: microtubule (1323) 180 42.7 0.0055
XP_005259882 (OMIM: 612258) PREDICTED: microtubule (1324) 180 42.7 0.0055
XP_005259881 (OMIM: 612258) PREDICTED: microtubule (1325) 180 42.7 0.0055
XP_005259880 (OMIM: 612258) PREDICTED: microtubule (1331) 180 42.7 0.0055
XP_016882000 (OMIM: 612258) PREDICTED: microtubule (1347) 180 42.7 0.0056
XP_011526125 (OMIM: 612258) PREDICTED: microtubule (1355) 180 42.7 0.0056
XP_016881997 (OMIM: 612258) PREDICTED: microtubule (1411) 180 42.8 0.0058
XP_016881996 (OMIM: 612258) PREDICTED: microtubule (1412) 180 42.8 0.0058
XP_016881995 (OMIM: 612258) PREDICTED: microtubule (1418) 180 42.8 0.0058
XP_006722762 (OMIM: 612258) PREDICTED: microtubule (1419) 180 42.8 0.0058
>>NP_004279 (OMIM: 604448) cytohesin-interacting protein (359 aa)
initn: 2358 init1: 2358 opt: 2358 Z-score: 2250.5 bits: 425.0 E(85289): 1.3e-118
Smith-Waterman score: 2358; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KE0 MSLQRLLQHSSNGNLADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSLQRLLQHSSNGNLADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 HCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 HCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 SSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSR
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 RNRSISNTSSGSMSPLWEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 RNRSISNTSSGSMSPLWEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
310 320 330 340 350
>>XP_016860875 (OMIM: 604448) PREDICTED: cytohesin-inter (253 aa)
initn: 1669 init1: 1669 opt: 1669 Z-score: 1598.7 bits: 303.9 E(85289): 2.6e-82
Smith-Waterman score: 1669; 100.0% identity (100.0% similar) in 253 aa overlap (107-359:1-253)
80 90 100 110 120 130
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
::::::::::::::::::::::::::::::
XP_016 MFTLICKIQEDSPAHCAGLQAGDVLANING
10 20 30
140 150 160 170 180 190
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
40 50 60 70 80 90
200 210 220 230 240 250
pF1KE0 LQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRLSSESSCKSWLSSMTMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPGPALVDRNRLSSESSCKSWLSSMTMD
100 110 120 130 140 150
260 270 280 290 300 310
pF1KE0 SEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSGSMSPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEDGYQTCVSEDSSRGAFSRQTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSGSMSPL
160 170 180 190 200 210
320 330 340 350
pF1KE0 WEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
:::::::::::::::::::::::::::::::::::::::::::
XP_016 WEGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
220 230 240 250
>>NP_859062 (OMIM: 612027) general receptor for phosphoi (395 aa)
initn: 667 init1: 349 opt: 542 Z-score: 526.0 bits: 106.0 E(85289): 1.5e-22
Smith-Waterman score: 643; 39.8% identity (68.3% similar) in 334 aa overlap (45-359:71-395)
20 30 40 50 60 70
pF1KE0 LADFCAGPAYSSYSTLTGSLTMDDNRRIQMLADTVATLPRGRKQLALTRSSSLSDFSWSQ
:: . .:::: :: .. : ..::. .:
NP_859 PPAAAATPGPPADELYAALEDYHPAELYRALAVSGGTLPR-RKGSGF-RWKNLSQSPEQQ
50 60 70 80 90
80 90 100 110 120 130
pF1KE0 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANI
::..:.::.::.:::::::.: .... :: :..:...:.:::. ::: ::..:..
NP_859 RKVLTLEKEDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASV
100 110 120 130 140 150
140 150 160 170 180 190
pF1KE0 NGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRS
::...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: ::::
NP_859 NGLNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRS
160 170 180 190 200 210
200 210 220 230 240
pF1KE0 LQLQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKS
:..::.::.:: ... ::. .... . :.: ::: : :: :. .: ..
NP_859 LMVQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RG
220 230 240 250 260 270
250 260 270 280 290
pF1KE0 WLSSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRS
:..:. :.:: :: :. .: . .. : : : ::
NP_859 GARRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRS
280 290 300 310 320 330
300 310 320 330 340 350
pF1KE0 SSRRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEE
.: : . .. ..:. . :: :. ... : ::.. : :..::::::::.:..:::
NP_859 ASVRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEE
340 350 360 370 380 390
pF1KE0 ESRF
::..
NP_859 ESQL
>>XP_005268748 (OMIM: 612027) PREDICTED: general recepto (265 aa)
initn: 549 init1: 231 opt: 408 Z-score: 401.3 bits: 82.4 E(85289): 1.3e-15
Smith-Waterman score: 509; 38.6% identity (66.9% similar) in 272 aa overlap (107-359:1-265)
80 90 100 110 120 130
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
: :..:...:.:::. ::: ::..:..::
XP_005 MVTFVCRVHESSPAQLAGLTPGDTIASVNG
10 20 30
140 150 160 170 180 190
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: :::::.
XP_005 LNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLM
40 50 60 70 80
200 210 220 230 240 250
pF1KE0 LQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWL
.::.::.:: ... ::. .... . :.: ::: : :: :. .: ..
XP_005 VQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGA
90 100 110 120 130 140
260 270 280 290
pF1KE0 SSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSS
:..:. :.:: :: :. .: . .. : : : ::.:
XP_005 RRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSAS
150 160 170 180 190 200
300 310 320 330 340 350
pF1KE0 RRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEES
: . .. ..:. . :: :. ... : ::.. : :..::::::::.:..:::::
XP_005 VRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEES
210 220 230 240 250 260
pF1KE0 RF
..
XP_005 QL
>>XP_011536298 (OMIM: 612027) PREDICTED: general recepto (265 aa)
initn: 549 init1: 231 opt: 408 Z-score: 401.3 bits: 82.4 E(85289): 1.3e-15
Smith-Waterman score: 509; 38.6% identity (66.9% similar) in 272 aa overlap (107-359:1-265)
80 90 100 110 120 130
pF1KE0 LVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANING
: :..:...:.:::. ::: ::..:..::
XP_011 MVTFVCRVHESSPAQLAGLTPGDTIASVNG
10 20 30
140 150 160 170 180 190
pF1KE0 VSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQ
...::. ....::.:..:::.: .::: :: : ...::::.:: ::::: .:: :::::.
XP_011 LNVEGIRHREIVDIIKASGNVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLM
40 50 60 70 80
200 210 220 230 240 250
pF1KE0 LQEHRLLHGDAANCPSL-ENMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWL
.::.::.:: ... ::. .... . :.: ::: : :: :. .: ..
XP_011 VQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGA
90 100 110 120 130 140
260 270 280 290
pF1KE0 SSMTMDSEDG-YQTCVSEDSSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSS
:..:. :.:: :: :. .: . .. : : : ::.:
XP_011 RRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSAS
150 160 170 180 190 200
300 310 320 330 340 350
pF1KE0 RRNRSISNTSSGSM-SPLW-EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEES
: . .. ..:. . :: :. ... : ::.. : :..::::::::.:..:::::
XP_011 VRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEES
210 220 230 240 250 260
pF1KE0 RF
..
XP_011 QL
>>NP_001258785 (OMIM: 612027) general receptor for phosp (252 aa)
initn: 473 init1: 167 opt: 332 Z-score: 329.5 bits: 69.0 E(85289): 1.3e-11
Smith-Waterman score: 433; 37.5% identity (66.0% similar) in 253 aa overlap (126-359:7-252)
100 110 120 130 140 150
pF1KE0 RPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSG
..::..:..::...::. ....::.:..::
NP_001 MTLLPSKGGDTIASVNGLNVEGIRHREIVDIIKASG
10 20 30
160 170 180 190 200 210
pF1KE0 NLLTIETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSL-E
:.: .::: :: : ...::::.:: ::::: .:: :::::..::.::.:: ... ::. .
NP_001 NVLRLETLYGTSI-RKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYD
40 50 60 70 80 90
220 230 240 250 260
pF1KE0 NMDLDELSLFGP--LPG--P-GPALVDRNRLSSESSCKSWLSSMTMDSEDG-YQTCVSED
... . :.: ::: : :: :. .: .. :..:. :.:: :
NP_001 TLESVRSCLYGAGLLPGSLPFGPLLAVPGRP------RGGARRARGDADDAVYHTCFFGD
100 110 120 130 140
270 280 290 300 310
pF1KE0 SSRGAF------SRQTS---TDDECFIPKEGDDF-LRRSSSRRNRSISNTSSGSM-SPLW
: :. .: . .. : : : ::.: : . .. ..:. . ::
NP_001 SEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSASVRCAGPGGGGGGGAPGALW
150 160 170 180 190 200
320 330 340 350
pF1KE0 -EGNLSSMFGTLPRKSRKGSVRKQLLKFIPGLHRAVEEEESRF
:. ... : ::.. : :..::::::::.:..:::::..
NP_001 TEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEESQL
210 220 230 240 250
>>NP_001188255 (OMIM: 603831) Na(+)/H(+) exchange regula (408 aa)
initn: 380 init1: 147 opt: 178 Z-score: 180.2 bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)
60 70 80 90 100 110
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
::.....:: .. . . . :.
NP_001 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
10 20 30
120 130 140 150 160 170
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
... :::. :::: :: . :::: .. . :::::.:.::: .:. .:.: :
NP_001 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
.. .. :. : :. :..
NP_001 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGQ
100 110 120 130 140 150
>>XP_011507921 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch (409 aa)
initn: 193 init1: 170 opt: 178 Z-score: 180.2 bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)
60 70 80 90 100 110
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
::.....:: .. . . . :.
XP_011 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
10 20 30
120 130 140 150 160 170
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
... :::. :::: :: . :::: .. . :::::.:.::: .:. .:.: :
XP_011 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
.. .. :. : :. :..
XP_011 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
100 110 120 130 140 150
>>XP_016856954 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch (409 aa)
initn: 193 init1: 170 opt: 178 Z-score: 180.2 bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)
60 70 80 90 100 110
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
::.....:: .. . . . :.
XP_016 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
10 20 30
120 130 140 150 160 170
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
... :::. :::: :: . :::: .. . :::::.:.::: .:. .:.: :
XP_016 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
.. .. :. : :. :..
XP_016 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
100 110 120 130 140 150
>>XP_016856955 (OMIM: 603831) PREDICTED: Na(+)/H(+) exch (409 aa)
initn: 193 init1: 170 opt: 178 Z-score: 180.2 bits: 42.1 E(85289): 0.0027
Smith-Waterman score: 178; 32.7% identity (63.6% similar) in 107 aa overlap (82-188:14-112)
60 70 80 90 100 110
pF1KE0 LPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLI
::.....:: .. . . . :.
XP_016 MTSTFNPRECKLSKQEGQNYGFFLRIEKDTEGH--------LV
10 20 30
120 130 140 150 160 170
pF1KE0 CKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIETLNGTMILKR
... :::. :::: :: . :::: .. . :::::.:.::: .:. .:.: :
XP_016 RVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSGNSVTLLVLDGDSYEKA
40 50 60 70 80 90
180 190 200 210 220 230
pF1KE0 TELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDLDELSLFGPLPGPG
.. .. :. : :. :..
XP_016 VKTRVDLKELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSLKTVQGK
100 110 120 130 140 150
359 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:29:58 2016 done: Wed Nov 2 20:29:59 2016
Total Scan time: 9.000 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]