Result of FASTA (omim) for
pFN21AE0587
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0587, 278 aa
1>>>pF1KE0587 278 - 278 aa - 278 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4059+/-0.000663; mu= 10.8804+/- 0.042
mean_var=372.0434+/-71.791, 0's: 0 Z-trim(117.4): 300 B-trim: 23 in 1/49
Lambda= 0.066493
statistics sampled from 29120 (29432) to 29120 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.569), E-opt: 0.2 (0.345), width: 16
Scan time: 5.850
The best scores are: opt bits E(85289)
NP_001005922 (OMIM: 148022) keratin-associated pro ( 278) 2415 245.2 9.9e-65
NP_005544 (OMIM: 148021) keratin-associated protei ( 169) 751 85.2 8.8e-17
NP_000418 (OMIM: 152445,604117) loricrin [Homo sap ( 312) 449 56.7 6.2e-08
NP_061978 (OMIM: 600985,606408,615963) tenascin-X (4242) 400 53.9 5.9e-06
XP_016878162 (OMIM: 612454) PREDICTED: multiple ep (1021) 360 49.1 4.2e-05
XP_016878161 (OMIM: 612454) PREDICTED: multiple ep (1044) 360 49.1 4.2e-05
NP_115821 (OMIM: 612454) multiple epidermal growth (1044) 360 49.1 4.2e-05
XP_016878160 (OMIM: 612454) PREDICTED: multiple ep (1092) 360 49.1 4.3e-05
XP_016878159 (OMIM: 612454) PREDICTED: multiple ep (1097) 360 49.1 4.3e-05
NP_112228 (OMIM: 608820) keratin-associated protei ( 167) 338 45.6 7.3e-05
XP_011507814 (OMIM: 610278) PREDICTED: platelet en ( 868) 322 45.3 0.00048
NP_000217 (OMIM: 144200,607606) keratin, type I cy ( 623) 307 43.6 0.0011
XP_016856727 (OMIM: 610278) PREDICTED: platelet en ( 973) 307 43.9 0.0014
XP_016856728 (OMIM: 610278) PREDICTED: platelet en ( 973) 307 43.9 0.0014
XP_016856726 (OMIM: 610278) PREDICTED: platelet en ( 973) 307 43.9 0.0014
XP_011507813 (OMIM: 610278) PREDICTED: platelet en (1002) 307 44.0 0.0014
NP_001073940 (OMIM: 610278) platelet endothelial a (1037) 307 44.0 0.0014
XP_016856725 (OMIM: 610278) PREDICTED: platelet en (1037) 307 44.0 0.0014
XP_005245198 (OMIM: 610278) PREDICTED: platelet en (1037) 307 44.0 0.0014
XP_011507812 (OMIM: 610278) PREDICTED: platelet en (1037) 307 44.0 0.0014
XP_016856723 (OMIM: 610278) PREDICTED: platelet en (1125) 307 44.0 0.0015
NP_001295050 (OMIM: 612453,614399) multiple epider ( 567) 299 42.8 0.0018
NP_001295048 (OMIM: 612453,614399) multiple epider ( 567) 299 42.8 0.0018
NP_115822 (OMIM: 612453,614399) multiple epidermal (1140) 299 43.3 0.0025
NP_001243474 (OMIM: 612453,614399) multiple epider (1140) 299 43.3 0.0025
XP_011541996 (OMIM: 612453,614399) PREDICTED: mult (1140) 299 43.3 0.0025
XP_016865476 (OMIM: 612453,614399) PREDICTED: mult (1195) 299 43.3 0.0026
XP_016878164 (OMIM: 612454) PREDICTED: multiple ep ( 854) 295 42.7 0.0029
XP_016878163 (OMIM: 612454) PREDICTED: multiple ep ( 854) 295 42.7 0.0029
XP_016884554 (OMIM: 600920,613619) PREDICTED: scav ( 617) 290 42.0 0.0034
XP_016863885 (OMIM: 610083,615145) PREDICTED: tene (2443) 300 43.9 0.0034
XP_016863884 (OMIM: 610083,615145) PREDICTED: tene (2551) 300 44.0 0.0035
XP_016863883 (OMIM: 610083,615145) PREDICTED: tene (2622) 300 44.0 0.0036
XP_016863880 (OMIM: 610083,615145) PREDICTED: tene (2707) 300 44.0 0.0036
XP_016863879 (OMIM: 610083,615145) PREDICTED: tene (2708) 300 44.0 0.0036
XP_016863878 (OMIM: 610083,615145) PREDICTED: tene (2714) 300 44.0 0.0036
XP_016863874 (OMIM: 610083,615145) PREDICTED: tene (2715) 300 44.0 0.0036
XP_016863875 (OMIM: 610083,615145) PREDICTED: tene (2715) 300 44.0 0.0036
XP_016863876 (OMIM: 610083,615145) PREDICTED: tene (2715) 300 44.0 0.0036
XP_016863877 (OMIM: 610083,615145) PREDICTED: tene (2715) 300 44.0 0.0036
XP_006723861 (OMIM: 601033) PREDICTED: laminin sub (2300) 298 43.7 0.0038
NP_878315 (OMIM: 600920,613619) scavenger receptor ( 866) 290 42.2 0.004
NP_699165 (OMIM: 600920,613619) scavenger receptor ( 871) 290 42.2 0.004
XP_011527121 (OMIM: 601033) PREDICTED: laminin sub (3609) 298 44.0 0.0048
XP_011527120 (OMIM: 601033) PREDICTED: laminin sub (3654) 298 44.0 0.0048
NP_005551 (OMIM: 601033) laminin subunit alpha-5 p (3695) 298 44.0 0.0048
XP_006723859 (OMIM: 601033) PREDICTED: laminin sub (3700) 298 44.0 0.0048
NP_114163 (OMIM: 608822) keratin-associated protei ( 174) 268 38.9 0.0079
XP_016884705 (OMIM: 300588) PREDICTED: teneurin-1 (1239) 282 41.7 0.0082
XP_016884704 (OMIM: 300588) PREDICTED: teneurin-1 (1246) 282 41.7 0.0082
>>NP_001005922 (OMIM: 148022) keratin-associated protein (278 aa)
initn: 2415 init1: 2415 opt: 2415 Z-score: 1283.1 bits: 245.2 E(85289): 9.9e-65
Smith-Waterman score: 2415; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278)
10 20 30 40 50 60
pF1KE0 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 GGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCC
190 200 210 220 230 240
250 260 270
pF1KE0 KPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
::::::::::::::::::::::::::::::::::::::
NP_001 KPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
250 260 270
>>NP_005544 (OMIM: 148021) keratin-associated protein 5- (169 aa)
initn: 1909 init1: 629 opt: 751 Z-score: 422.3 bits: 85.2 E(85289): 8.8e-17
Smith-Waterman score: 961; 65.1% identity (74.1% similar) in 189 aa overlap (90-278:2-169)
60 70 80 90 100 110
pF1KE0 SCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC
: :: : ::::: .::.: .: :.:
NP_005 MGCCGCS-GGCGS------SCGGCDSSCGSC
10 20
120 130 140 150 160 170
pF1KE0 GSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGS
:::: ::: :::.:: ::::.:::::::::::::: :::::: :::.::::: :..
NP_005 GSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCG-----CSQ
30 40 50 60 70
180 190 200 210 220 230
pF1KE0 CGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSC
:. :: : :. .::::.: : .: : : .:: : : .:.: :::: : ::
NP_005 CSCCKPCC--CS---SGCGSSC--CQCSCCKPYCS-QCSCCKPCCSSSGR-GSSCCQSSC
80 90 100 110 120 130
240 250 260 270
pF1KE0 CKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
::::: ::::::::::::::::::::: :::::: ::::
NP_005 CKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI
140 150 160
>>NP_000418 (OMIM: 152445,604117) loricrin [Homo sapiens (312 aa)
initn: 700 init1: 295 opt: 449 Z-score: 263.4 bits: 56.7 E(85289): 6.2e-08
Smith-Waterman score: 518; 44.0% identity (56.0% similar) in 250 aa overlap (4-213:51-298)
10 20 30
pF1KE0 MGCCGCSGGCGSSCGGCGSGC--GGCGSGCGGC
:: ::: : : ::::.: :: :.: :::
NP_000 GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGC
30 40 50 60 70 80
40 50 60 70
pF1KE0 GSGCGGS-------GSSCCVPVCCCKP---VCCRVPTCSCSSCGKGGCGSSGG--SKGG-
:.: ::: ::: : . : . :: : .:: :::: :.::
NP_000 GGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGG
90 100 110 120 130 140
80 90 100 110 120
pF1KE0 --CGSCGG---------CKGGCG-SCGGSKGGCGSCGGSKGGCGS-CGGSKGG--CGSGC
: : :: :.. : : :::.:: ..: .: :: :: :: : :: ::.:
NP_000 SGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGS
150 160 170 180 190 200
130 140 150 160 170
pF1KE0 -GGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGC--SKGACGS--CGGSKGGCG
:: ::. . : :. . .: : :: :. :: : :. :: :::...: :
NP_000 SGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIG
210 220 230 240 250 260
180 190 200 210 220 230
pF1KE0 SCGGC--KGGCGSCGGSK---GGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSS
: :: .:: . :::.. :: ::. :: ::: :::.:
NP_000 S--GCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVPICHQTQQKQAPTWPSK
270 280 290 300 310
240 250 260 270
pF1KE0 CSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
>>NP_061978 (OMIM: 600985,606408,615963) tenascin-X isof (4242 aa)
initn: 185 init1: 154 opt: 400 Z-score: 228.0 bits: 53.9 E(85289): 5.9e-06
Smith-Waterman score: 420; 30.7% identity (44.7% similar) in 313 aa overlap (7-274:184-483)
10 20
pF1KE0 MGCCGCSGGCGSSC---GGCGSG-C----GGCGSGC
::.: ..: : : : : : : .:
NP_061 CTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRCVCFPGYTGPSC
160 170 180 190 200 210
30 40 50 60 70 80
pF1KE0 G--GCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCG-GC
: .: . : : : : :: :. . : :: :: .: :.. : .:: : :
NP_061 GWPSCPGDCQGRGR-CVQGVCVCR-AGFSGPDCSQRSCPRG-CSQRGRCEGGRCVCDPGY
220 230 240 250 260 270
90 100 110 120 130
pF1KE0 KGG-CG--SCGGSKGGCGSCGGSKGGC--GSCGGSKGGCGSGCG--GCGSSCCVPVCCCK
: :: :: ::.. .: : : : . : : :: .: .: :
NP_061 TGDDCGMRSC---PRGCSQ----RGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKD
280 290 300 310 320
140 150 160 170 180
pF1KE0 PMCCCVPACSCSSCGKGGCG-SCG----CSKGACGSCGGSKG-GCGS--CG-GCKGGCGS
: : :. . .:: .: .:: : : : : : :.. : :.: :
NP_061 GRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGR-GR
330 340 350 360 370 380
190 200 210 220 230 240
pF1KE0 CGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGC-----GSSCSQCSC---CK
: : : : :. ::: : .:.. : : .. : :..:.. .: :.
NP_061 C--EDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCR
390 400 410 420 430 440
250 260 270
pF1KE0 P--------CCCSSG-CGSSCCQSSCCKPCCSQSSCCVPVC-CQCKI
: :..: : .: :: : ... : : :
NP_061 GRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGD
450 460 470 480 490 500
NP_061 CRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCP
510 520 530 540 550 560
>>XP_016878162 (OMIM: 612454) PREDICTED: multiple epider (1021 aa)
initn: 147 init1: 99 opt: 360 Z-score: 212.7 bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)
10 20 30
pF1KE0 MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
: :..: : : :. : :. :.
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
210 220 230 240 250 260
40 50 60 70 80
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
: : :.. : : : : .: : :.. : : :: : :.. :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
..: :.:. . :.: : :: : .. : : : : : .: : : :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
: ::.:. .: . .: : :. : . . :.. :.: . : :
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
380 390 400 410 420 430
210 220 230 240 250
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
:. .:..: : : :::.. :.:. :.: .:.. .: :: :: .
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
440 450 460 470 480
260 270
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI
:. :: :.... : :. :.:
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
490 500 510 520 530 540
>>XP_016878161 (OMIM: 612454) PREDICTED: multiple epider (1044 aa)
initn: 147 init1: 99 opt: 360 Z-score: 212.6 bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)
10 20 30
pF1KE0 MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
: :..: : : :. : :. :.
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
210 220 230 240 250 260
40 50 60 70 80
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
: : :.. : : : : .: : :.. : : :: : :.. :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
..: :.:. . :.: : :: : .. : : : : : .: : : :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
: ::.:. .: . .: : :. : . . :.. :.: . : :
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
380 390 400 410 420 430
210 220 230 240 250
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
:. .:..: : : :::.. :.:. :.: .:.. .: :: :: .
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
440 450 460 470 480
260 270
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI
:. :: :.... : :. :.:
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
490 500 510 520 530 540
>>NP_115821 (OMIM: 612454) multiple epidermal growth fac (1044 aa)
initn: 147 init1: 99 opt: 360 Z-score: 212.6 bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)
10 20 30
pF1KE0 MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
: :..: : : :. : :. :.
NP_115 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
210 220 230 240 250 260
40 50 60 70 80
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
: : :.. : : : : .: : :.. : : :: : :.. :
NP_115 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
..: :.:. . :.: : :: : .. : : : : : .: : : :
NP_115 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
: ::.:. .: . .: : :. : . . :.. :.: . : :
NP_115 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
380 390 400 410 420 430
210 220 230 240 250
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
:. .:..: : : :::.. :.:. :.: .:.. .: :: :: .
NP_115 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
440 450 460 470 480
260 270
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI
:. :: :.... : :. :.:
NP_115 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
490 500 510 520 530 540
>>XP_016878160 (OMIM: 612454) PREDICTED: multiple epider (1092 aa)
initn: 147 init1: 99 opt: 360 Z-score: 212.4 bits: 49.1 E(85289): 4.3e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)
10 20 30
pF1KE0 MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
: :..: : : :. : :. :.
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
210 220 230 240 250 260
40 50 60 70 80
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
: : :.. : : : : .: : :.. : : :: : :.. :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
..: :.:. . :.: : :: : .. : : : : : .: : : :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
: ::.:. .: . .: : :. : . . :.. :.: . : :
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
380 390 400 410 420 430
210 220 230 240 250
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
:. .:..: : : :::.. :.:. :.: .:.. .: :: :: .
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
440 450 460 470 480
260 270
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI
:. :: :.... : :. :.:
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
490 500 510 520 530 540
>>XP_016878159 (OMIM: 612454) PREDICTED: multiple epider (1097 aa)
initn: 99 init1: 99 opt: 360 Z-score: 212.4 bits: 49.1 E(85289): 4.3e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)
10 20 30
pF1KE0 MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
: :..: : : :. : :. :.
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
210 220 230 240 250 260
40 50 60 70 80
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
: : :.. : : : : .: : :.. : : :: : :.. :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
..: :.:. . :.: : :: : .. : : : : : .: : : :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
: ::.:. .: . .: : :. : . . :.. :.: . : :
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
380 390 400 410 420 430
210 220 230 240 250
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
:. .:..: : : :::.. :.:. :.: .:.. .: :: :: .
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
440 450 460 470 480
260 270
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI
:. :: :.... : :. :.:
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
490 500 510 520 530 540
>>NP_112228 (OMIM: 608820) keratin-associated protein 1- (167 aa)
initn: 284 init1: 185 opt: 338 Z-score: 208.2 bits: 45.6 E(85289): 7.3e-05
Smith-Waterman score: 381; 37.2% identity (51.4% similar) in 183 aa overlap (102-276:4-160)
80 90 100 110 120 130
pF1KE0 SGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCC
: : : ::. : : :::.: : :::
NP_112 MTCCQTSFCGYPSCSTS-GTCGSSC--CQPSCC
10 20 30
140 150 160 170 180 190
pF1KE0 VPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCG
. ::.: :: . :. : . .: : .: . .: : :: :. .: :
NP_112 -ETSCCQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC--C------ETSC--CQPSC--CQ
40 50 60 70
200 210 220 230 240
pF1KE0 GSKGGCGSGCG-GCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCS-QCSCCKPCCCSSGC
:. ::.::: : : : : . .: :. . : .: . .: ::: :
NP_112 TSS--CGTGCGIGGGIGYG------QEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCT
80 90 100 110 120
250 260 270
pF1KE0 GSSCCQ-----SSCCKPC-CSQSSCCVPVCCQCKI
.::: .:::.: :.:: :: :::: :
NP_112 PPTCCQLHHAEASCCRPSYCGQS-CCRPVCC-CYSCEPTC
130 140 150 160
278 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:04:32 2016 done: Wed Nov 2 21:04:33 2016
Total Scan time: 5.850 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]