Result of FASTA (ccds) for
pFN21AE0567
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0567, 255 aa
1>>>pF1KE0567 255 - 255 aa - 255 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9900+/-0.00131; mu= 15.4644+/- 0.080
mean_var=261.7737+/-48.457, 0's: 0 Z-trim(110.3): 169 B-trim: 0 in 0/51
Lambda= 0.079270
statistics sampled from 11330 (11506) to 11330 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.353), width: 16
Scan time: 1.800
The best scores are: opt bits E(32554)
CCDS42955.1 2 gene_id:386679|Hs108|chr21 ( 255) 2058 248.1 4.3e-66
CCDS42961.1 9 gene_id:386676|Hs108|chr21 ( 292) 1730 210.7 9e-55
CCDS42954.1 1 gene_id:386677|Hs108|chr21 ( 282) 1719 209.4 2.1e-54
CCDS42962.1 11 gene_id:386678|Hs108|chr21 ( 298) 1685 205.6 3.2e-53
CCDS42958.1 5 gene_id:386680|Hs108|chr21 ( 271) 1501 184.5 6.7e-47
CCDS42957.1 4 gene_id:386672|Hs108|chr21 ( 401) 1313 163.3 2.4e-40
CCDS42959.1 6 gene_id:386674|Hs108|chr21 ( 365) 1255 156.6 2.3e-38
CCDS74803.1 7 gene_id:386675|Hs108|chr21 ( 370) 1240 154.8 7.5e-38
CCDS33585.1 10 gene_id:353333|Hs108|chr21 ( 251) 1236 154.1 8.5e-38
CCDS42956.1 3 gene_id:386682|Hs108|chr21 ( 221) 1174 146.9 1.1e-35
CCDS13713.1 8 gene_id:386681|Hs108|chr21 ( 259) 1001 127.2 1.1e-29
CCDS42967.1 12 gene_id:386685|Hs108|chr21 ( 245) 972 123.9 1e-28
CCDS56029.1 1 gene_id:728318|Hs108|chr17 ( 250) 795 103.7 1.3e-22
CCDS56032.1 1 gene_id:100505753|Hs108|chr17 ( 517) 790 103.6 2.7e-22
CCDS32649.1 12 gene_id:83755|Hs108|chr17 ( 201) 772 100.9 7.2e-22
CCDS42331.1 3 gene_id:85290|Hs108|chr17 ( 195) 764 99.9 1.3e-21
CCDS54125.1 6 gene_id:81871|Hs108|chr17 ( 205) 702 92.9 1.9e-19
CCDS45675.1 11 gene_id:653240|Hs108|chr17 ( 195) 699 92.5 2.3e-19
CCDS32650.1 5 gene_id:85289|Hs108|chr17 ( 181) 654 87.3 7.9e-18
CCDS32651.1 2 gene_id:83899|Hs108|chr17 ( 174) 636 85.2 3.2e-17
CCDS54127.1 9 gene_id:81870|Hs108|chr17 ( 169) 630 84.5 5.1e-17
CCDS45674.1 8 gene_id:728224|Hs108|chr17 ( 185) 620 83.4 1.2e-16
CCDS59287.1 7 gene_id:100505724|Hs108|chr17 ( 169) 617 83.0 1.4e-16
CCDS54124.1 9 gene_id:100132386|Hs108|chr17 ( 210) 610 82.4 2.8e-16
CCDS62183.1 1 gene_id:100533177|Hs108|chr17 ( 341) 611 82.9 3.2e-16
CCDS11383.1 4 gene_id:84616|Hs108|chr17 ( 166) 584 79.2 2e-15
CCDS45673.1 7 gene_id:100132476|Hs108|chr17 ( 155) 557 76.1 1.6e-14
CCDS53677.1 9 gene_id:3846|Hs108|chr11 ( 169) 556 76.0 1.8e-14
CCDS42334.1 8 gene_id:83901|Hs108|chr17 ( 159) 546 74.8 3.9e-14
CCDS11385.1 3 gene_id:83900|Hs108|chr17 ( 159) 534 73.5 1e-13
CCDS41591.1 3 gene_id:387266|Hs108|chr11 ( 238) 522 72.4 3.2e-13
CCDS11384.1 2 gene_id:85291|Hs108|chr17 ( 136) 517 71.4 3.6e-13
CCDS11386.1 4 gene_id:85280|Hs108|chr17 ( 154) 498 69.3 1.7e-12
CCDS59286.1 6 gene_id:100507608|Hs108|chr17 ( 160) 493 68.8 2.6e-12
CCDS42965.1 2 gene_id:353323|Hs108|chr21 ( 146) 464 65.4 2.5e-11
CCDS41685.1 11 gene_id:440051|Hs108|chr11 ( 156) 464 65.4 2.6e-11
CCDS42324.1 1 gene_id:81851|Hs108|chr17 ( 177) 462 65.3 3.2e-11
CCDS31331.1 2 gene_id:440021|Hs108|chr11 ( 177) 457 64.7 4.8e-11
CCDS42321.1 5 gene_id:83895|Hs108|chr17 ( 174) 449 63.8 8.9e-11
CCDS41682.1 7 gene_id:440050|Hs108|chr11 ( 165) 448 63.7 9.4e-11
>>CCDS42955.1 2 gene_id:386679|Hs108|chr21 (255 aa)
initn: 2058 init1: 2058 opt: 2058 Z-score: 1300.0 bits: 248.1 E(32554): 4.3e-66
Smith-Waterman score: 2058; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCGASSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCGASSC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCS
190 200 210 220 230 240
250
pF1KE0 RPASCSFSSGQKSSC
:::::::::::::::
CCDS42 RPASCSFSSGQKSSC
250
>>CCDS42961.1 9 gene_id:386676|Hs108|chr21 (292 aa)
initn: 1708 init1: 1708 opt: 1730 Z-score: 1096.8 bits: 210.7 E(32554): 9e-55
Smith-Waterman score: 1730; 88.2% identity (92.2% similar) in 245 aa overlap (1-245:1-244)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
:::::::: ::: ..::::::::::::: :: . ::::::::::::::::: :::::::.
CCDS42 MAASTMSIRSSAYSDSWQVDDCPESCCEPPCCATSCCAPAPCLTLVCTPVSRVSSPCCQV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCGASSC
.:::: :::::::::::::::::::::: :::::::::::::::::::::::::::::::
CCDS42 TCEPSPCQSGCTSSCTPSCCQQSSCQPAYCTSSPCQQACCVPVCCKPVCCVPVCCGASSC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQQ
::::: ::::::::::: .: :::::: :::.:::::.: ::::::::::::::::::::
CCDS42 CQQSSYQPACCASSSCQPACCVPVCCKPVCCAPTCSEDSYSCCQQSSCQPACCTSSPCQQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCS
: :: ::::::::: :::::::::::: :::::.:::::::.:::::::::::::::::
CCDS42 SYCVPVCCKPVCCKPICCVPVCSGASSLCCQQSGCQPACCTTSCCRPSSSVSLLCRPVC-
190 200 210 220 230
250
pF1KE0 RPASCSFSSGQKSSC
::: :
CCDS42 RPACCVPVSSCCAPTSSRQPSYCRQASCVSLLCRPVCSRPACYSFSSGQKSSC
240 250 260 270 280 290
>>CCDS42954.1 1 gene_id:386677|Hs108|chr21 (282 aa)
initn: 1998 init1: 980 opt: 1719 Z-score: 1090.1 bits: 209.4 E(32554): 2.1e-54
Smith-Waterman score: 1719; 83.8% identity (89.2% similar) in 259 aa overlap (1-255:1-258)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
:::::::.:::::..::::: ::::::: : . ::::::::::::::::: ::::::::
CCDS42 MAASTMSVCSSACSDSWQVDACPESCCEPHCCALSCCAPAPCLTLVCTPVSRVSSPCCQA
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCC-GASS
::::: ::::::::::::::::::::::::::::::::::::::::::::.:.: .::
CCDS42 ACEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCLPTCSKDSSS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 CCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQ
:::::::::.:::::: :::: :::::: :: ::::::.::::::::::.::::::::::
CCDS42 CCQQSSCQPTCCASSSSQQSCCVPVCCKPVCYVPTCSEDSSSCCQQSSCHPACCTSSPCQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 QSCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVC
:.::: : ::::::: :::::::::::. :::::::::::::.:::::::::::::::::
CCDS42 QACCVPVRCKPVCCKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVC
190 200 210 220 230 240
240 250
pF1KE0 SRPASC---SFSSGQKSSC
::: : : . :::
CCDS42 -RPACCMPVSSCCAPASSCQASCCRPASCVSLLCRPACSRPAC
250 260 270 280
>>CCDS42962.1 11 gene_id:386678|Hs108|chr21 (298 aa)
initn: 1798 init1: 924 opt: 1685 Z-score: 1068.9 bits: 205.6 E(32554): 3.2e-53
Smith-Waterman score: 1694; 81.3% identity (87.6% similar) in 267 aa overlap (1-255:1-267)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
:::::::.:::: ..::::::::::::: ::..:::::::: :.::::::::::::::::
CCDS42 MAASTMSVCSSAYSDSWQVDDCPESCCEPPCSAPSCCAPAPSLSLVCTPVSCVSSPCCQA
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCK-----PVCCVPVCC
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::
CCDS42 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKTVCCKPVCCVPVCC
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 GA-SSCCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCT
:: ::::.::::::::::::::: .: :::::: :::: ::::.::::::::::::::::
CCDS42 GAASSCCRQSSCQPACCASSSCQPACCVPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCT
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 SSPCQQSCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLL
:: ::.::: :::: : :: :::::::: ::: ::: ::::::::.::::::::::::
CCDS42 SSSYQQACCVPVCCKTVYCKPICCVPVCSRASSSRCQQPSCQPACCTTSCCRPSSSVSLL
190 200 210 220 230 240
240 250
pF1KE0 CRPVCSR----PAS--CSFSSGQKSSC
:.::: :.: :. .:. .:::
CCDS42 CHPVCRSTCCVPVSSCCAPTSSCQSSCCRPASCVSLLCRPASSRLACYSLCSGKKSSC
250 260 270 280 290
>>CCDS42958.1 5 gene_id:386680|Hs108|chr21 (271 aa)
initn: 1618 init1: 1011 opt: 1501 Z-score: 955.5 bits: 184.5 E(32554): 6.7e-47
Smith-Waterman score: 1660; 83.7% identity (89.8% similar) in 246 aa overlap (1-245:1-234)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
::: :::.:::::..::.:::::::::: :::: :::::::::::::::::::::
CCDS42 MAACTMSVCSSACSDSWRVDDCPESCCEPPCGT------APCLTLVCTPVSCVSSPCCQA
10 20 30 40 50
70 80 90 100 110
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCC-GASS
::::: ::::::::::::::: ::::.:::::::::::::::::::.:.: .::
CCDS42 ACEPSPCQSGCTSSCTPSCCQ-----PACCASSPCQQACCVPVCCKPVCCLPTCSKDSSS
60 70 80 90 100
120 130 140 150 160 170
pF1KE0 CCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQ
:::::::::.::::::::::: :::::: :::::::::.::::::.:::::.::::::::
CCDS42 CCQQSSCQPTCCASSSCQQSCCVPVCCKPVCCVPTCSEDSSSCCQHSSCQPTCCTSSPCQ
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE0 QSCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVC
::: : ::::::::: :::::::::::. :::::::::::::.:::::::::::::::.:
CCDS42 QSCYVPVCCKPVCCKPICCVPVCSGASTSCCQQSSCQPACCTTSCCRPSSSVSLLCRPIC
170 180 190 200 210 220
240 250
pF1KE0 SRPASCSFSSGQKSSC
::: :
CCDS42 -RPACCLPISSCCAPASSYQASCCRPASCVSLLCRPACSPLAC
230 240 250 260 270
>>CCDS42957.1 4 gene_id:386672|Hs108|chr21 (401 aa)
initn: 2501 init1: 951 opt: 1313 Z-score: 837.9 bits: 163.3 E(32554): 2.4e-40
Smith-Waterman score: 1434; 65.6% identity (73.7% similar) in 285 aa overlap (9-255:20-297)
10 20 30 40
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTP
:.: :..::::::::::::: :: .::::::::::.:::::
CCDS42 MSVCSSDLSYSSRVCLPGSCDS-CSDSWQVDDCPESCCEPPCCAPSCCAPAPCLSLVCTP
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 VSCVSSPCCQAACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCK---
:: :::::: ..:::: :::::::::::::::::::: :::.:::::::::::::::
CCDS42 VSRVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVC
60 70 80 90 100 110
110 120 130 140 150
pF1KE0 --PVCCVPVCCGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVC------------CV
:::::::::: :::::::::: :::.:: :::.: ::.::: :: ::
CCDS42 CKPVCCVPVCCGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQSSCV
120 130 140 150 160 170
160 170 180 190
pF1KE0 -----PTC--------------SESSSSCCQQSSCQPACCTSSPCQQSCCVSVCCKPVCC
: : : . :::::::::::::::: :::.::: ::::
CCDS42 SCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCQPACCTSSSCQQACCV-----PVCC
180 190 200 210 220 230
200 210 220 230 240 250
pF1KE0 KSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCSRPASCS--FSSGQ
:..:: :::: :: ::::::::::::::: :. . : . :.::: .:. :: . ::
CCDS42 KTVCCKPVCSEDSSSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCKPV-CSVPICSGA
240 250 260 270 280 290
pF1KE0 KSSC
.: :
CCDS42 SSLCCQQSSCQPACCTSSQSQQGCCVPVCCKPVSCVPVCSGASSSCCQQSSCQPACCTTS
300 310 320 330 340 350
>--
initn: 497 init1: 497 opt: 553 Z-score: 368.2 bits: 76.3 E(32554): 3.5e-14
Smith-Waterman score: 553; 66.1% identity (75.7% similar) in 115 aa overlap (121-234:298-401)
100 110 120 130 140 150
pF1KE0 TSSPCQQACCVPVCCKPVCCVPVCCGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVC
:::::::::::.::. ::.: :::::: :
CCDS42 QACCVPVCCKPVCCKPVCSVPICSGASSLCCQQSSCQPACCTSSQSQQGCCVPVCCKPVS
270 280 290 300 310 320
160 170 180 190 200 210
pF1KE0 CVPTCSESSSSCCQQSSCQPACCTSSPCQQSCCVSVCCKPVCCKSICCVPVCSGASSPCC
:::.:: .::::::::::::::::.: :. : ::. :.::: . ::::: : ::
CCDS42 CVPVCSGASSSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVC-RPACCVPVPS-----CC
330 340 350 360 370 380
220 230 240 250
pF1KE0 QQ-SSCQPACCTSSCCRPSSSVSLLCRPVCSRPASCSFSSGQKSSC
::::: :::::.: ::::
CCDS42 APTSSCQP-----SCCRPASCVSLL
390 400
>>CCDS42959.1 6 gene_id:386674|Hs108|chr21 (365 aa)
initn: 1807 init1: 809 opt: 1255 Z-score: 802.4 bits: 156.6 E(32554): 2.3e-38
Smith-Waterman score: 1367; 61.7% identity (68.2% similar) in 308 aa overlap (1-255:1-293)
10 20 30 40
pF1KE0 MAASTMSICSS---------------ACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTL
:::::::.::: .:..::::::::::::: : ::::::::.:
CCDS42 MAASTMSVCSSDLSYGSRVCLPGSCDSCSDSWQVDDCPESCCE-----PPCCAPAPCLSL
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 VCTPVSCVSSPCCQAACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCC
:::::: :::::: ..:::: :::::::::::::::::::: :::.::::::::::::::
CCDS42 VCTPVSRVSSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCC
60 70 80 90 100 110
110 120 130 140 150
pF1KE0 K-----PVCCVPVCCGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVC----------
: ::::: :::: :::::::::: :::.:: :::.: :::::: ::
CCDS42 KTVCCKPVCCVSVCCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCKPVCSGISSSCCQQ
120 130 140 150 160 170
160 170 180
pF1KE0 --CV-----PTC--------------SESSSSCCQQSSCQPACCTSSPCQQSCCVSVCCK
:: : : : . ::::::::::.:::::::::.::: :::
CCDS42 SSCVSCVSSPCCQAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTSSPCQQACCVPVCCV
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE0 PVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCSRPAS--CSF
:::: ::.:: :: ::::::::::::::: :. . : :::: .. :.
CCDS42 PVCC-----VPTCSEDSSSCCQQSSCQPACCTSSPCQHAC-----CVPVCSGASTSCCQQ
240 250 260 270 280
250
pF1KE0 SSGQKSSC
:: : . :
CCDS42 SSCQPACCTASCCRSSSSVSLLCHPVCKSTCCVPVPSCGASASSCQPSCCRTASCVSLLC
290 300 310 320 330 340
>>CCDS74803.1 7 gene_id:386675|Hs108|chr21 (370 aa)
initn: 1315 init1: 779 opt: 1240 Z-score: 793.1 bits: 154.8 E(32554): 7.5e-38
Smith-Waterman score: 1322; 59.9% identity (67.6% similar) in 309 aa overlap (1-255:1-293)
10 20 30 40
pF1KE0 MAASTMSICSS---------------ACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTL
:::::::.::: .:..::::::::::::: : ::::::::.:
CCDS74 MAASTMSVCSSDLSYGSRVCLPGSCDSCSDSWQVDDCPESCCE-----PPCCAPAPCLSL
10 20 30 40 50
50 60 70 80 90 100
pF1KE0 VCTPVSCVSSPCCQAACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCC
:::::: ::::::...:::: :::::::::::::::::::: :::.::::::::::::::
CCDS74 VCTPVSYVSSPCCRVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCC
60 70 80 90 100 110
110 120 130 140 150
pF1KE0 KPVCC-----VPVCCGASSCCQQSSCQPACCASSSCQQSCRVPVCCKAVC----------
: ::: :::: : :::::::::: :::.:: :::.: ::.::: ::
CCDS74 KTVCCKPVYCVPVCSGDSSCCQQSSCQSACCTSSPCQQACCVPICCKPVCSGISSSCCQQ
120 130 140 150 160 170
160 170 180
pF1KE0 --CV-----PTC--------------SESSSSCCQQSSCQPACCTSSPCQQSCCVSVCCK
:: : : : . ::::::::.:::::::::::.::: ::::
CCDS74 SSCVSCVSSPCCQAVCEPSPCQSGCISSCTPSCCQQSSCKPACCTSSPCQQACCVPVCCK
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE0 PVCCKSICCVPVCSGASSPCCQQSSCQPACCTSSCCRPSSSVSLLCRPVCSRPASCSFSS
:::: ::.:: :. :: :::::::: . . : . :.::: :. :: .:
CCDS74 PVCC-----VPTCSDDSGSCC-----QPACCTSSQSQQGCCVPVCCKPVCCVPV-CSGAS
240 250 260 270 280
250
pF1KE0 G---QKSSC
:.:::
CCDS74 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQASCCRPAS
290 300 310 320 330 340
>>CCDS33585.1 10 gene_id:353333|Hs108|chr21 (251 aa)
initn: 1120 init1: 595 opt: 1236 Z-score: 792.0 bits: 154.1 E(32554): 8.5e-38
Smith-Waterman score: 1410; 73.0% identity (79.8% similar) in 267 aa overlap (1-255:1-251)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
::::::::::::::.::.: :::::::: :: :::::: :::::::::::::::::.
CCDS33 MAASTMSICSSACTDSWRVVDCPESCCE-PC----CCAPAPSLTLVCTPVSCVSSPCCQT
10 20 30 40 50
70 80 90 100 110
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVC------
:::::::::: ::::: : ::::::: ::::::::::::::::: ::::::::
CCDS33 ACEPSACQSGYTSSCTTPCYQQSSCQPDCCTSSPCQQACCVPVCCVPVCCVPVCNKPVCF
60 70 80 90 100 110
120 130 140 150 160
pF1KE0 ---CGASS--CCQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQ
:. :: :::::::::.::.:: :::.: :::: :.:: ::.:: .:.:::::::::
CCDS33 VPTCSESSPSCCQQSSCQPTCCTSSPCQQACCVPVCSKSVCYVPVCSGASTSCCQQSSCQ
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 PACCTSSPCQQSCCVSVCCKPVCCKSICCVPVCS-GASSPCCQQSSCQPACCTSSCCRPS
:::::.: :. : ::. :.::: :: ::::: : :::. ::::: :::: .
CCDS33 PACCTASCCRPSSSVSLLCHPVC-KSTCCVPVPSCGASA-----SSCQP-----SCCRTA
180 190 200 210 220
230 240 250
pF1KE0 SSVSLLCRPVCSRPASCSFSSGQKSSC
: ::::::::::::: :. :::::::
CCDS33 SCVSLLCRPVCSRPACYSLCSGQKSSC
230 240 250
>>CCDS42956.1 3 gene_id:386682|Hs108|chr21 (221 aa)
initn: 2113 init1: 884 opt: 1174 Z-score: 754.2 bits: 146.9 E(32554): 1.1e-35
Smith-Waterman score: 1323; 68.6% identity (76.0% similar) in 258 aa overlap (1-255:1-221)
10 20 30 40 50 60
pF1KE0 MAASTMSICSSACTNSWQVDDCPESCCELPCGTPSCCAPAPCLTLVCTPVSCVSSPCCQA
::.::::.:::: ..::::: ::::::: :: . ::::::::::::::::::::::::::
CCDS42 MATSTMSVCSSAYSDSWQVDACPESCCEPPCCATSCCAPAPCLTLVCTPVSCVSSPCCQA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 ACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCGASSC
::::: :::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ACEPSPCQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKPVCCVPVCCK----
70 80 90 100 110
130 140 150 160 170 180
pF1KE0 CQQSSCQPACCASSSCQQSCRVPVCCKAVCCVPTCSESSSSCCQQSSCQPACCTSSPCQQ
::::: .::::.:: .::::::::: ::::::.: :.
CCDS42 ----------------------PVCCKPICCVPVCSGASSSCCQQSSRQPACCTTSCCRP
120 130 140 150
190 200 210 220 230
pF1KE0 SCCVSVCCKPVCCKSICCVPVCSGASSPCCQQ-SSCQPACCTSSCCRPSSSVSLLCRPVC
: ::. :.::: .: ::::. : :: :.::: :::::.: :::::::.:
CCDS42 SSSVSLLCRPVC-RSTCCVPIPS-----CCAPASTCQP-----SCCRPASCVSLLCRPTC
160 170 180 190 200
240 250
pF1KE0 SR--PASCSFSSGQKSSC
:: : :..::::::::
CCDS42 SRLSSACCGLSSGQKSSC
210 220
255 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 23:01:00 2016 done: Wed Nov 2 23:01:00 2016
Total Scan time: 1.800 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]