Result of FASTA (ccds) for
pFN21AE3131
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3131, 329 aa
1>>>pF1KE3131 329 - 329 aa - 329 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2957+/-0.000704; mu= 16.8101+/- 0.043
mean_var=70.0611+/-14.125, 0's: 0 Z-trim(111.0): 46 B-trim: 251 in 1/50
Lambda= 0.153227
statistics sampled from 11960 (12006) to 11960 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.727), E-opt: 0.2 (0.369), width: 16
Scan time: 2.710
The best scores are: opt bits E(32554)
CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 329) 2334 524.4 4.7e-149
CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5 ( 332) 2318 520.9 5.5e-148
CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5 ( 263) 1829 412.8 1.6e-115
CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4 ( 268) 1564 354.2 6.9e-98
CCDS7369.1 TSPAN14 gene_id:81619|Hs108|chr10 ( 270) 1126 257.4 9.8e-69
CCDS5810.1 TSPAN33 gene_id:340348|Hs108|chr7 ( 283) 796 184.4 9.3e-47
CCDS7294.1 TSPAN15 gene_id:23555|Hs108|chr10 ( 294) 587 138.2 7.7e-33
CCDS44448.1 TSPAN14 gene_id:81619|Hs108|chr10 ( 147) 549 129.6 1.5e-30
CCDS77130.1 TSPAN10 gene_id:83882|Hs108|chr17 ( 393) 518 123.1 3.8e-28
CCDS7909.1 CD82 gene_id:3732|Hs108|chr11 ( 267) 402 97.3 1.5e-20
CCDS7910.1 TSPAN18 gene_id:90139|Hs108|chr11 ( 248) 382 92.9 3e-19
CCDS14470.1 TSPAN6 gene_id:7105|Hs108|chrX ( 245) 335 82.5 3.9e-16
CCDS8520.1 TSPAN9 gene_id:10867|Hs108|chr12 ( 239) 333 82.0 5.2e-16
CCDS14248.1 TSPAN7 gene_id:7102|Hs108|chrX ( 249) 323 79.8 2.5e-15
CCDS7719.1 CD151 gene_id:977|Hs108|chr11 ( 253) 317 78.5 6.3e-15
CCDS7721.1 TSPAN4 gene_id:7106|Hs108|chr11 ( 238) 316 78.3 7e-15
CCDS829.1 CD53 gene_id:963|Hs108|chr1 ( 219) 303 75.4 4.8e-14
CCDS8999.1 TSPAN8 gene_id:7103|Hs108|chr12 ( 237) 300 74.7 8.1e-14
CCDS7734.1 CD81 gene_id:975|Hs108|chr11 ( 236) 278 69.9 2.4e-12
CCDS31765.1 TSPAN11 gene_id:441631|Hs108|chr12 ( 253) 275 69.2 4e-12
CCDS8540.1 CD9 gene_id:928|Hs108|chr12 ( 228) 269 67.9 9.1e-12
CCDS8890.1 CD63 gene_id:967|Hs108|chr12 ( 238) 259 65.7 4.4e-11
CCDS881.1 TSPAN2 gene_id:10100|Hs108|chr1 ( 221) 256 65.0 6.5e-11
CCDS10292.1 TSPAN3 gene_id:10099|Hs108|chr15 ( 253) 255 64.8 8.5e-11
>>CCDS54952.1 TSPAN17 gene_id:26262|Hs108|chr5 (329 aa)
initn: 2334 init1: 2334 opt: 2334 Z-score: 2789.5 bits: 524.4 E(32554): 4.7e-149
Smith-Waterman score: 2334; 100.0% identity (100.0% similar) in 329 aa overlap (1-329:1-329)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQNSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQNSL
250 260 270 280 290 300
310 320
pF1KE3 TGAPGPAPPSRHVFFGLGGLYPEPTFKNW
:::::::::::::::::::::::::::::
CCDS54 TGAPGPAPPSRHVFFGLGGLYPEPTFKNW
310 320
>>CCDS34298.1 TSPAN17 gene_id:26262|Hs108|chr5 (332 aa)
initn: 2320 init1: 1497 opt: 2318 Z-score: 2770.3 bits: 520.9 E(32554): 5.5e-148
Smith-Waterman score: 2318; 99.1% identity (99.1% similar) in 332 aa overlap (1-329:1-332)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
130 140 150 160 170 180
190 200 210 220 230
pF1KE3 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKL---ELEQQGFIHTKGCVGQFEKWLQDNLIV
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::
CCDS34 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLVRGELEQQGFIHTKGCVGQFEKWLQDNLIV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE3 VAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQ
250 260 270 280 290 300
300 310 320
pF1KE3 NSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
::::::::::::::::::::::::::::::::
CCDS34 NSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
310 320 330
>>CCDS47346.2 TSPAN17 gene_id:26262|Hs108|chr5 (263 aa)
initn: 1829 init1: 1829 opt: 1829 Z-score: 2187.6 bits: 412.8 E(32554): 1.6e-115
Smith-Waterman score: 1829; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQNSL
:::::::::::::::::::
CCDS47 VFMGIALLQIFGICLAQNLEQME
250 260
>>CCDS3646.1 TSPAN5 gene_id:10098|Hs108|chr4 (268 aa)
initn: 1569 init1: 1545 opt: 1564 Z-score: 1870.8 bits: 354.2 E(32554): 6.9e-98
Smith-Waterman score: 1564; 78.9% identity (92.6% similar) in 270 aa overlap (1-270:1-268)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
: :: :.. :::.:: :::.::::..:: :: ::.::::::.:::::::::..:::::
CCDS36 MSGK--HYKGPEVSCCIKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGG
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
.::::::.:::::: .:::::::::::::::::::::::::.::::::..:.::::::::
CCDS36 FDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDW
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
:.::: .:::::..::::::::::::::.::::.:::: : .:::::::::::: : :::
CCDS36 IKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
:::::::::..::::::.:::::::.: : :..:: :.::::: :::::::::: .:::
CCDS36 RCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 VFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQNSL
.:.::::::::::::::::::::.::.:.:
CCDS36 IFIGIALLQIFGICLAQNLVSDIEAVRASW
240 250 260
>>CCDS7369.1 TSPAN14 gene_id:81619|Hs108|chr10 (270 aa)
initn: 1111 init1: 1111 opt: 1126 Z-score: 1347.5 bits: 257.4 E(32554): 9.8e-69
Smith-Waterman score: 1126; 58.3% identity (84.5% similar) in 264 aa overlap (5-268:3-266)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
. .... .:.: ::.::..::.::. :..::..:::::.::::::... .: . :
CCDS73 MHYYRYSNAKVSCWYKYLLFSYNIIFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHG
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
.::: : ..:: :: .::::::.:::::: ::.:: . ::::::::...:::.:.::
CCDS73 IDPVVLVLMVGVVMFTLGFAGCVGALRENICLLNFFCGTIVLIFFLELAVAVLAFLFQDW
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRE
.::.. :...:.:.:::::::::::: :. .:::: ::.::.::.::::. . :::
CCDS73 VRDRFREFFESNIKSYRDDIDLQNLIDSLQKANQCCGAYGPEDWDLNVYFNCSGASYSRE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 RCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAG
.::::::::: :::. :.:::::::::..:. . . : ::::. .:.:: :. .:::
CCDS73 KCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAG
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 VFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQQNSL
::..:.::::::: ::..:.:::.::::
CCDS73 VFIAISLLQIFGIFLARTLISDIEAVKAGHHF
240 250 260 270
>>CCDS5810.1 TSPAN33 gene_id:340348|Hs108|chr7 (283 aa)
initn: 799 init1: 715 opt: 796 Z-score: 953.0 bits: 184.4 E(32554): 9.3e-47
Smith-Waterman score: 796; 45.4% identity (75.2% similar) in 262 aa overlap (3-264:12-265)
10 20 30 40 50
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSN
:.. : : : ::.:: ::..:::.. ...:.:..: : . .
CCDS58 MARRPRAPAASGEEFSFVSPLV----KYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAA
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 ISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATG
.. :. .::. :..::: .: .: : ::::.:::: ::. ::. : .:.:.::.:
CCDS58 LACLA----VDPAILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTAVFLLQLAAG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 ILAFVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFN
::.:::.: : ... .::: . ::::.::::::::.:. .::::. . .::. :.:::
CCDS58 ILGFVFSDKARGKVSEIINNAIVHYRDDLDLQNLIDFGQKKFSCCGGISYKDWSQNMYFN
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 CTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWL
:.. :::::::.::.:::. : . :.::.:: .. :: . :.:.::. .. .:.
CCDS58 CSEDNPSRERCSVPYSCCLPTPDQAVINTMCGQGMQAFDYLEASKVIYTNGCIDKLVNWI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 QDNLIVVAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLS
..::....:: .:.:. :. :: :.: ::..::
CCDS58 HSNLFLLGGVALGLAIPQLVGILLSQILVNQIKDQIKLQLYNQQHRADPWY
240 250 260 270 280
300 310 320
pF1KE3 TAGPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
>>CCDS7294.1 TSPAN15 gene_id:23555|Hs108|chr10 (294 aa)
initn: 590 init1: 307 opt: 587 Z-score: 703.0 bits: 138.2 E(32554): 7.7e-33
Smith-Waterman score: 587; 34.0% identity (70.0% similar) in 250 aa overlap (18-266:21-262)
10 20 30 40 50
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNI-SALT
:. :. .. :::..::: :..:..: :. ... ::.
CCDS72 MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAF-
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 DLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFV
: :. .....: :: ...: : ...::.: .::. : .::. ...:: :..:..
CCDS72 ----LAPAIILILLGVVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALT
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 FKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLN
:.. : :: : ... : ::.:..:..::.:. ..:::.. ::. : : .:.
CCDS72 FRNQTIDFLNDNIRRGIENYYDDLDFKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCS--A
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 PSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLI
:. ::::..::.:. .: :.::.::: . : .. : :...::.. :..::
CCDS72 PGPLACGVPYTCCIRNTTE-VVNTMCGYKTIDKERFSVQDVIYVRGCTNAVIIWFMDNYT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 VVAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTAGPQ
..::...:: : :..:. :. .. .. .
CCDS72 IMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPSVEAAGTGCCLCY
240 250 260 270 280 290
>>CCDS44448.1 TSPAN14 gene_id:81619|Hs108|chr10 (147 aa)
initn: 597 init1: 540 opt: 549 Z-score: 662.0 bits: 129.6 E(32554): 1.5e-30
Smith-Waterman score: 549; 59.2% identity (83.2% similar) in 125 aa overlap (145-268:19-143)
120 130 140 150 160 170
pF1KE3 FVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWS-CCGARGPNDWNLNIYFNCT
:... .:. :::: ::.::.::.::::.
CCDS44 MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCS
10 20 30 40
180 190 200 210 220 230
pF1KE3 DLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQD
. :::.::::::::: :::. :.:::::::::..:. . . : ::::. .:.::
CCDS44 GASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPR
50 60 70 80 90 100
240 250 260 270 280 290
pF1KE3 NLIVVAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTISEVLSTA
:. .:::::..:.::::::: ::..:.:::.::::
CCDS44 NIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGHHF
110 120 130 140
300 310 320
pF1KE3 GPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
>>CCDS77130.1 TSPAN10 gene_id:83882|Hs108|chr17 (393 aa)
initn: 344 init1: 253 opt: 518 Z-score: 618.8 bits: 123.1 E(32554): 3.8e-28
Smith-Waterman score: 534; 36.5% identity (60.5% similar) in 304 aa overlap (16-311:113-392)
10 20 30 40
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGE
: ::..: :. : .:: : ::::::. .
CCDS77 CSCCPPETKHQALSGTPKKGPAPSLSPGSSCVKYLIFLSNFPFSLLGLLALAIGLWGLAV
90 100 110 120 130 140
50 60 70 80 90 100
pF1KE3 KGVLSNISALTDLGG---LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGL
:: :. .:::: ::. ... : :.:....:: .::: ::: ::. :: :.
CCDS77 KGSLG-----SDLGGPLPADPMLGLALGGLVVSAVSLAGYLGALCENTCLLRGFSG--GI
150 160 170 180 190
110 120 130 140 150 160
pF1KE3 IFFLELATGILAFVFKDW--IRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARG
. :: : . :.: : ..:.:. . . :.:: ::. :.: .: :::: .
CCDS77 LAFLVLEAVAGALVVALWGPLQDSLEHTLRVAIAHYQDDPDLRFLLDQVQLGLRCCGAAS
200 210 220 230 240 250
170 180 190 200 210
pF1KE3 PNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAED--VLNTQCGYDVRLKLELEQ-QGF
.::. :.::::. .:. . :..: :::. :: :: .: :::. : :.:. . :
CCDS77 YQDWQQNLYFNCS--SPGVQACSLPASCCI-DPREDGASVNDQCGFGV-LRLDADAAQRV
260 270 280 290 300 310
220 230 240 250 260 270
pF1KE3 IHTKGCVGQFEKWLQDNLIVVAGVFMGIALLQIFGICLAQNLVSDIKAVKANWSKWNDDF
.. .:: ...::. :: . .: ....::: . :: :.. . : .. .
CCDS77 VYLEGCGPPLRRWLRANLAASGGYAIAVVLLQGAELLLAARLLGALAARRGAAYGPGARG
320 330 340 350 360 370
280 290 300 310 320
pF1KE3 ENHWLTPTISEVLSTAGPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
:.. ::::. : ::: : :.:
CCDS77 EDR------------AGPQSPS-PGAPPAAKPARG
380 390
>>CCDS7909.1 CD82 gene_id:3732|Hs108|chr11 (267 aa)
initn: 417 init1: 227 opt: 402 Z-score: 482.6 bits: 97.3 E(32554): 1.5e-20
Smith-Waterman score: 402; 28.3% identity (63.2% similar) in 258 aa overlap (18-262:10-259)
10 20 30 40 50 60
pF1KE3 MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGG
::::: ::..:..:::..:..:.: ..:. . .. .. .
CCDS79 MGSACIKVTKYFLFLFNLIFFILGAVILGFGVWILADKSSFISVLQTSSSSL
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 LDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDW
...:. ::.: ..:: :::::. : :: .. .:: ::.. ....: : .
CCDS79 RMGAYVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLYFAFLLLILIAQVTAGALFYFNMGK
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 IRDQLNLFINNNVKAY---RDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNP
...... .... .. : :.: .::. :..: .::: . .:. : . .:
CCDS79 LKQEMGGIVTELIRDYNSSRED-SLQDAWDYVQAQVKCCGWVSFYNWTDNAEL----MN-
120 130 140 150 160
180 190 200 210 220 230
pF1KE3 SRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGF------IHTKGCVGQFEKWL
: . : :: :. .. :... :. . . :.: .. .::. . . ::
CCDS79 -RPEVTYPCSCEVKGEEDNSLSVRKGF-CEAPGNRTQSGNHPEDWPVYQEGCMEKVQAWL
170 180 190 200 210 220
240 250 260 270 280
pF1KE3 QDNLIVVAGVFMGIALLQIFG----ICLAQNLVSDIKAVKANWSKWNDDFENHWLTPTIS
:.:: .. :: .:.:.....: ::: ... :.
CCDS79 QENLGIILGVGVGVAIIELLGMVLSICLCRHVHSEDYSKVPKY
230 240 250 260
290 300 310 320
pF1KE3 EVLSTAGPQQNSLTGAPGPAPPSRHVFFGLGGLYPEPTFKNW
329 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:28:31 2016 done: Sun Nov 6 03:28:32 2016
Total Scan time: 2.710 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]