FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4016, 195 aa 1>>>pF1KE4016 195 - 195 aa - 195 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2576+/-0.000927; mu= 13.7304+/- 0.056 mean_var=77.9207+/-15.020, 0's: 0 Z-trim(106.3): 85 B-trim: 5 in 1/50 Lambda= 0.145294 statistics sampled from 8824 (8916) to 8824 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.274), width: 16 Scan time: 2.000 The best scores are: opt bits E(32554) CCDS10073.1 CHP1 gene_id:11261|Hs108|chr15 ( 195) 1261 273.6 5.6e-74 CCDS10617.1 CHP2 gene_id:63928|Hs108|chr16 ( 196) 806 178.2 2.9e-45 CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 ( 170) 289 69.8 1.1e-12 >>CCDS10073.1 CHP1 gene_id:11261|Hs108|chr15 (195 aa) initn: 1261 init1: 1261 opt: 1261 Z-score: 1441.7 bits: 273.6 E(32554): 5.6e-74 Smith-Waterman score: 1261; 100.0% identity (100.0% similar) in 195 aa overlap (1-195:1-195) 10 20 30 40 50 60 pF1KE4 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 130 140 150 160 170 180 190 pF1KE4 EKVDVEQKMSIRFLH ::::::::::::::: CCDS10 EKVDVEQKMSIRFLH 190 >>CCDS10617.1 CHP2 gene_id:63928|Hs108|chr16 (196 aa) initn: 796 init1: 454 opt: 806 Z-score: 926.2 bits: 178.2 E(32554): 2.9e-45 Smith-Waterman score: 806; 61.0% identity (87.2% similar) in 195 aa overlap (1-194:1-195) 10 20 30 40 50 60 pF1KE4 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN ::::.: . . :..:::::.... ::. :: .::....: ::: :.:.: ::.: CCDS10 MGSRSSHAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNE-KSKDVNGPEPLNSRSNKLHFAF :::::::..:::.: ..:.: ::.:.::::::.::.. ...: . ::::::: ::::.:: CCDS10 PLGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAF 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 RLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKV .:::::.: :::: :.:::::.::::....::: .:::::.::::.:::.:.::.::.: CCDS10 QLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKS 130 140 150 160 170 180 180 190 pF1KE4 LEKVDVEQKMSIRFLH :::.:::::::::.: CCDS10 LEKMDVEQKMSIRILK 190 >>CCDS46310.1 PPP3R1 gene_id:5534|Hs108|chr2 (170 aa) initn: 436 init1: 287 opt: 289 Z-score: 341.3 bits: 69.8 E(32554): 1.1e-12 Smith-Waterman score: 431; 43.2% identity (69.8% similar) in 169 aa overlap (23-191:15-168) 10 20 30 40 50 60 pF1KE4 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN :. ..: :: .:: .:: ..:.:: :.:. .::: : CCDS46 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 PLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR :: .:.:. : .:. .:.:. :.. ...: :.:. ::.:::: CCDS46 PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ---------------KLRFAFR 60 70 80 90 130 140 150 160 170 180 pF1KE4 LYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL .::.::: :: ::.:::.:::: :..: :: .:.:.:: .::.:::. ::: :: :. CCDS46 IYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 100 110 120 130 140 150 190 pF1KE4 EKVDVEQKMSIRFLH .:...:: . CCDS46 GGLDIHKKMVVDV 160 170 195 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:21:21 2016 done: Sun Nov 6 04:21:22 2016 Total Scan time: 2.000 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]