FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3009, 92 aa 1>>>pF1KE3009 92 - 92 aa - 92 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6543+/-0.000527; mu= 11.8786+/- 0.032 mean_var=48.5184+/- 9.528, 0's: 0 Z-trim(112.5): 6 B-trim: 20 in 1/50 Lambda= 0.184128 statistics sampled from 13265 (13268) to 13265 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.408), width: 16 Scan time: 1.230 The best scores are: opt bits E(32554) CCDS53368.1 RIIAD1 gene_id:284485|Hs108|chr1 ( 92) 608 167.9 7.7e-43 >>CCDS53368.1 RIIAD1 gene_id:284485|Hs108|chr1 (92 aa) initn: 608 init1: 608 opt: 608 Z-score: 882.6 bits: 167.9 E(32554): 7.7e-43 Smith-Waterman score: 608; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92) 10 20 30 40 50 60 pF1KE3 METLPGLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 METLPGLLQRPDPGALSAAQLEQLRKFKIQTRIANEKYLRTHKEVEWLISGFFREIFLKR 10 20 30 40 50 60 70 80 90 pF1KE3 PDNILEFAADYFTDPRLPNKIHMQLIKDKKAA :::::::::::::::::::::::::::::::: CCDS53 PDNILEFAADYFTDPRLPNKIHMQLIKDKKAA 70 80 90 92 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:29:01 2016 done: Sun Nov 6 04:29:02 2016 Total Scan time: 1.230 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]