FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3192, 447 aa 1>>>pF1KE3192 447 - 447 aa - 447 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2720+/-0.000901; mu= 12.5747+/- 0.054 mean_var=81.8759+/-16.798, 0's: 0 Z-trim(106.5): 16 B-trim: 0 in 0/50 Lambda= 0.141741 statistics sampled from 9001 (9011) to 9001 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.277), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS55023.1 FBXO9 gene_id:26268|Hs108|chr6 ( 447) 3032 629.9 1.6e-180 CCDS55022.1 FBXO9 gene_id:26268|Hs108|chr6 ( 437) 2942 611.5 5.3e-175 CCDS55024.1 FBXO9 gene_id:26268|Hs108|chr6 ( 403) 2724 566.9 1.3e-161 >>CCDS55023.1 FBXO9 gene_id:26268|Hs108|chr6 (447 aa) initn: 3032 init1: 3032 opt: 3032 Z-score: 3354.6 bits: 629.9 E(32554): 1.6e-180 Smith-Waterman score: 3032; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447) 10 20 30 40 50 60 pF1KE3 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS 370 380 390 400 410 420 430 440 pF1KE3 AFEIDKMYTPLFFARVRSYTAFSERPL ::::::::::::::::::::::::::: CCDS55 AFEIDKMYTPLFFARVRSYTAFSERPL 430 440 >>CCDS55022.1 FBXO9 gene_id:26268|Hs108|chr6 (437 aa) initn: 2942 init1: 2942 opt: 2942 Z-score: 3255.3 bits: 611.5 E(32554): 5.3e-175 Smith-Waterman score: 2942; 100.0% identity (100.0% similar) in 436 aa overlap (12-447:2-437) 10 20 30 40 50 60 pF1KE3 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE3 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS 360 370 380 390 400 410 430 440 pF1KE3 AFEIDKMYTPLFFARVRSYTAFSERPL ::::::::::::::::::::::::::: CCDS55 AFEIDKMYTPLFFARVRSYTAFSERPL 420 430 >>CCDS55024.1 FBXO9 gene_id:26268|Hs108|chr6 (403 aa) initn: 2724 init1: 2724 opt: 2724 Z-score: 3015.0 bits: 566.9 E(32554): 1.3e-161 Smith-Waterman score: 2724; 100.0% identity (100.0% similar) in 403 aa overlap (45-447:1-403) 20 30 40 50 60 70 pF1KE3 EEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARGS :::::::::::::::::::::::::::::: CCDS55 MFRAQWMFELAPGVSSSNLENRPCRAARGS 10 20 30 80 90 100 110 120 130 pF1KE3 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE3 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE3 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE3 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE3 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV 280 290 300 310 320 330 380 390 400 410 420 430 pF1KE3 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA 340 350 360 370 380 390 440 pF1KE3 RVRSYTAFSERPL ::::::::::::: CCDS55 RVRSYTAFSERPL 400 447 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:48:07 2016 done: Sun Nov 6 04:48:07 2016 Total Scan time: 2.860 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]