FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3101, 267 aa 1>>>pF1KE3101 267 - 267 aa - 267 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8902+/-0.000702; mu= 12.7156+/- 0.042 mean_var=86.6603+/-16.938, 0's: 0 Z-trim(111.8): 15 B-trim: 46 in 1/50 Lambda= 0.137773 statistics sampled from 12693 (12706) to 12693 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.39), width: 16 Scan time: 2.230 The best scores are: opt bits E(32554) CCDS6476.1 CER1 gene_id:9350|Hs108|chr9 ( 267) 1840 375.0 3.1e-104 >>CCDS6476.1 CER1 gene_id:9350|Hs108|chr9 (267 aa) initn: 1840 init1: 1840 opt: 1840 Z-score: 1984.9 bits: 375.0 E(32554): 3.1e-104 Smith-Waterman score: 1840; 98.5% identity (99.6% similar) in 267 aa overlap (1-267:1-267) 10 20 30 40 50 60 pF1KE3 MHLLLFQLLVLLPLGKTTWHQDGRQNQSSLSPVLLPRNQRELPTGNHEEAEEKPDLLVAV :::::::::::::::::: :::::::::::::::::::::::::::::::::::::.::: CCDS64 MHLLLFQLLVLLPLGKTTRHQDGRQNQSSLSPVLLPRNQRELPTGNHEEAEEKPDLFVAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PHLVGTSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMK ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 PHLVATSPAGEGQRQREKMLSRFGRFWKKPEREMHPSRDSDSEPFPPGTQSLIQPIDGMK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MEKSPLREEAKKFWHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKIV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS64 MEKSPLREEAKKFWHHFMFRKTPASQGVILPIKSHEVHWETCRTVPFSQTITHEGCEKVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 VQNNLCFGKCGSVHFPGAAQHSHTSCSHCLPAKFTTMHLPLNCTELSSVIKVVMLVEECQ 190 200 210 220 230 240 250 260 pF1KE3 CKVKTEHEDGHILHAGSQDSFIPGVSA ::::::::::::::::::::::::::: CCDS64 CKVKTEHEDGHILHAGSQDSFIPGVSA 250 260 267 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:51:47 2016 done: Sun Nov 6 04:51:48 2016 Total Scan time: 2.230 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]