FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3435, 927 aa 1>>>pF1KE3435 927 - 927 aa - 927 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.9832+/-0.00142; mu= -16.1248+/- 0.087 mean_var=589.8620+/-119.267, 0's: 0 Z-trim(113.5): 22 B-trim: 47 in 1/52 Lambda= 0.052808 statistics sampled from 14130 (14137) to 14130 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.434), width: 16 Scan time: 3.010 The best scores are: opt bits E(32554) CCDS54357.1 FBXO11 gene_id:80204|Hs108|chr2 ( 927) 6508 511.5 2.9e-144 CCDS1837.1 FBXO11 gene_id:80204|Hs108|chr2 ( 843) 5852 461.5 3e-129 >>CCDS54357.1 FBXO11 gene_id:80204|Hs108|chr2 (927 aa) initn: 6508 init1: 6508 opt: 6508 Z-score: 2703.4 bits: 511.5 E(32554): 2.9e-144 Smith-Waterman score: 6508; 100.0% identity (100.0% similar) in 927 aa overlap (1-927:1-927) 10 20 30 40 50 60 pF1KE3 MNSVRAANRRPRRVSRPRPVQQQQQQPPQQPPPQPPQQQPPQQQPPPPPQQQQQQQPPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MNSVRAANRRPRRVSRPRPVQQQQQQPPQQPPPQPPQQQPPQQQPPPPPQQQQQQQPPPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PPPPPPLPQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PPPPPPLPQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSME 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 CVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 KGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLIFVHSGIYTDEWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLIFVHSGIYTDEWI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 YIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKSAQHHNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 YIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKSAQHHNA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 HHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCENVGLYITDHAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 HHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCENVGLYITDHAQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 GIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNIHRNRIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNIHRNRIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 GFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVWITSNSDPTIRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVWITSNSDPTIRG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 NSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIHDGQHGGIYVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 NSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIHDGQHGGIYVH 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 EKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLEDNDIYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLEDNDIYN 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 HMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNAMAGVWIKTDSNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 HMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNAMAGVWIKTDSNP 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 TLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILRKNRIFDGFAAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILRKNRIFDGFAAG 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 IEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEKAVSRGQCLYKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 IEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEKAVSRGQCLYKIS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 SYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCT 850 860 870 880 890 900 910 920 pF1KE3 LAGEPTHDTDTLYDSAPPIESNTLQHN ::::::::::::::::::::::::::: CCDS54 LAGEPTHDTDTLYDSAPPIESNTLQHN 910 920 >>CCDS1837.1 FBXO11 gene_id:80204|Hs108|chr2 (843 aa) initn: 5852 init1: 5852 opt: 5852 Z-score: 2433.9 bits: 461.5 E(32554): 3e-129 Smith-Waterman score: 5852; 100.0% identity (100.0% similar) in 843 aa overlap (85-927:1-843) 60 70 80 90 100 110 pF1KE3 QQPPPPPPPPPPLPQERNNVGERDDDVPADMVAEESGPGAQNSPYQLRRKTLLPKRTACP :::::::::::::::::::::::::::::: CCDS18 MVAEESGPGAQNSPYQLRRKTLLPKRTACP 10 20 30 120 130 140 150 160 170 pF1KE3 TKNSMEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 TKNSMEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQ 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE3 DLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 DLCRAACVCKRFSELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKE 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE3 SFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLIFVHSGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 SFQQLYKGAHVKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLIFVHSGI 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE3 YTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 YTDEWIYIESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKS 220 230 240 250 260 270 360 370 380 390 400 410 pF1KE3 AQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCENVGLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 AQHHNAHHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCENVGLY 280 290 300 310 320 330 420 430 440 450 460 470 pF1KE3 ITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 ITDHAQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNI 340 350 360 370 380 390 480 490 500 510 520 530 pF1KE3 HRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVWITSNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 HRNRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVWITSNS 400 410 420 430 440 450 540 550 560 570 580 590 pF1KE3 DPTIRGNSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIHDGQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 DPTIRGNSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIHDGQH 460 470 480 490 500 510 600 610 620 630 640 650 pF1KE3 GGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 GGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGHGVLE 520 530 540 550 560 570 660 670 680 690 700 710 pF1KE3 DNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNAMAGVWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 DNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNAMAGVWI 580 590 600 610 620 630 720 730 740 750 760 770 pF1KE3 KTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILRKNRIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 KTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHPILRKNRIF 640 650 660 670 680 690 780 790 800 810 820 830 pF1KE3 DGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEKAVSRGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 DGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQDAIEKAVSRGQ 700 710 720 730 740 750 840 850 860 870 880 890 pF1KE3 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 CLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGT 760 770 780 790 800 810 900 910 920 pF1KE3 LSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN ::::::::::::::::::::::::::::::::: CCDS18 LSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN 820 830 840 927 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:07:09 2016 done: Sun Nov 6 05:07:09 2016 Total Scan time: 3.010 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]