Result of FASTA (omim) for
pFN21AE3428
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3428, 602 aa
1>>>pF1KE3428 602 - 602 aa - 602 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6865+/-0.000375; mu= 12.6661+/- 0.023
mean_var=92.2634+/-18.690, 0's: 0 Z-trim(114.6): 46 B-trim: 35 in 1/51
Lambda= 0.133524
statistics sampled from 24420 (24465) to 24420 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.287), width: 16
Scan time: 9.770
The best scores are: opt bits E(85289)
NP_001159611 (OMIM: 611799) ligand-dependent nucle ( 602) 3946 770.6 0
XP_016863453 (OMIM: 611799) PREDICTED: ligand-depe ( 442) 2845 558.4 1.8e-158
NP_710153 (OMIM: 611799) ligand-dependent nuclear ( 318) 1741 345.7 1.4e-94
XP_011512124 (OMIM: 611799) PREDICTED: ligand-depe (1871) 1732 344.2 2.3e-93
XP_011512123 (OMIM: 611799) PREDICTED: ligand-depe (1875) 1732 344.2 2.3e-93
XP_011512128 (OMIM: 611799) PREDICTED: ligand-depe ( 231) 1533 305.6 1.2e-82
XP_011512127 (OMIM: 611799) PREDICTED: ligand-depe ( 278) 1533 305.6 1.4e-82
XP_011512125 (OMIM: 611799) PREDICTED: ligand-depe (1788) 1037 210.3 4.4e-53
XP_016863451 (OMIM: 611799) PREDICTED: ligand-depe (1788) 1037 210.3 4.4e-53
XP_016863452 (OMIM: 611799) PREDICTED: ligand-depe (1788) 1037 210.3 4.4e-53
XP_016863454 (OMIM: 611799) PREDICTED: ligand-depe ( 234) 978 198.7 1.9e-50
XP_016863450 (OMIM: 611799) PREDICTED: ligand-depe (1791) 978 199.0 1.2e-49
XP_016872273 (OMIM: 607698) PREDICTED: ligand-depe ( 575) 702 145.6 4.2e-34
XP_011538579 (OMIM: 607698) PREDICTED: ligand-depe ( 272) 489 104.5 4.9e-22
NP_001164237 (OMIM: 607698) ligand-dependent corep ( 406) 389 85.3 4.4e-16
NP_001164236 (OMIM: 607698) ligand-dependent corep ( 433) 389 85.3 4.7e-16
NP_115816 (OMIM: 607698) ligand-dependent corepres ( 433) 389 85.3 4.7e-16
XP_016872275 (OMIM: 607698) PREDICTED: ligand-depe ( 433) 389 85.3 4.7e-16
XP_016872277 (OMIM: 607698) PREDICTED: ligand-depe ( 433) 389 85.3 4.7e-16
XP_016872276 (OMIM: 607698) PREDICTED: ligand-depe ( 433) 389 85.3 4.7e-16
XP_016872274 (OMIM: 607698) PREDICTED: ligand-depe ( 558) 389 85.3 5.8e-16
XP_006718096 (OMIM: 607698) PREDICTED: ligand-depe ( 593) 389 85.4 6.2e-16
>>NP_001159611 (OMIM: 611799) ligand-dependent nuclear r (602 aa)
initn: 3946 init1: 3946 opt: 3946 Z-score: 4110.1 bits: 770.6 E(85289): 0
Smith-Waterman score: 3946; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:1-602)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 YGIPQKTLLLHLEALPAGKPASFKNKTRDFHDSYSYKDSKETCAVLQKVALWARAQAERT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGIPQKTLLLHLEALPAGKPASFKNKTRDFHDSYSYKDSKETCAVLQKVALWARAQAERT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 EKSKLNLLETSEIKFPTASTYLHQLTLQKMVTQFKEKNESLQYETSNPTVQLKIPQLRVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKSKLNLLETSEIKFPTASTYLHQLTLQKMVTQFKEKNESLQYETSNPTVQLKIPQLRVS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 SVSKSQPDGSGLLDVMYQVSKTSSVLEGSALQKLKNILPKQNKIECSGPVTHSSVDSYFL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SVSKSQPDGSGLLDVMYQVSKTSSVLEGSALQKLKNILPKQNKIECSGPVTHSSVDSYFL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 HGDLSPLCLNSKNGTVDGTSENTEDGLDRKDSKQPRKKRGRYRQYDHEIMEEAIAMVMSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGDLSPLCLNSKNGTVDGTSENTEDGLDRKDSKQPRKKRGRYRQYDHEIMEEAIAMVMSG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 KMSVSKAQGIYGVPHSTLEYKVKERSGTLKTPPKKKLRLPDTGLYNMTDSGTGSCKNSSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KMSVSKAQGIYGVPHSTLEYKVKERSGTLKTPPKKKLRLPDTGLYNMTDSGTGSCKNSSK
550 560 570 580 590 600
pF1KE3 PV
::
NP_001 PV
>>XP_016863453 (OMIM: 611799) PREDICTED: ligand-dependen (442 aa)
initn: 2845 init1: 2845 opt: 2845 Z-score: 2966.0 bits: 558.4 E(85289): 1.8e-158
Smith-Waterman score: 2845; 100.0% identity (100.0% similar) in 442 aa overlap (161-602:1-442)
140 150 160 170 180 190
pF1KE3 QAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIGPS
::::::::::::::::::::::::::::::
XP_016 MKKMIRQFAIEYISKSGKTQENRNGSIGPS
10 20 30
200 210 220 230 240 250
pF1KE3 IVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSICD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSICD
40 50 60 70 80 90
260 270 280 290 300 310
pF1KE3 PSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGILYGIPQKTLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGILYGIPQKTLLL
100 110 120 130 140 150
320 330 340 350 360 370
pF1KE3 HLEALPAGKPASFKNKTRDFHDSYSYKDSKETCAVLQKVALWARAQAERTEKSKLNLLET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLEALPAGKPASFKNKTRDFHDSYSYKDSKETCAVLQKVALWARAQAERTEKSKLNLLET
160 170 180 190 200 210
380 390 400 410 420 430
pF1KE3 SEIKFPTASTYLHQLTLQKMVTQFKEKNESLQYETSNPTVQLKIPQLRVSSVSKSQPDGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SEIKFPTASTYLHQLTLQKMVTQFKEKNESLQYETSNPTVQLKIPQLRVSSVSKSQPDGS
220 230 240 250 260 270
440 450 460 470 480 490
pF1KE3 GLLDVMYQVSKTSSVLEGSALQKLKNILPKQNKIECSGPVTHSSVDSYFLHGDLSPLCLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GLLDVMYQVSKTSSVLEGSALQKLKNILPKQNKIECSGPVTHSSVDSYFLHGDLSPLCLN
280 290 300 310 320 330
500 510 520 530 540 550
pF1KE3 SKNGTVDGTSENTEDGLDRKDSKQPRKKRGRYRQYDHEIMEEAIAMVMSGKMSVSKAQGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKNGTVDGTSENTEDGLDRKDSKQPRKKRGRYRQYDHEIMEEAIAMVMSGKMSVSKAQGI
340 350 360 370 380 390
560 570 580 590 600
pF1KE3 YGVPHSTLEYKVKERSGTLKTPPKKKLRLPDTGLYNMTDSGTGSCKNSSKPV
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGVPHSTLEYKVKERSGTLKTPPKKKLRLPDTGLYNMTDSGTGSCKNSSKPV
400 410 420 430 440
>>NP_710153 (OMIM: 611799) ligand-dependent nuclear rece (318 aa)
initn: 1838 init1: 1741 opt: 1741 Z-score: 1819.0 bits: 345.7 E(85289): 1.4e-94
Smith-Waterman score: 1741; 95.6% identity (97.8% similar) in 274 aa overlap (1-274:1-274)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_710 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
::::::::::::::::::: :. . .. .. : :
NP_710 IKSEESSICDPSSENSVAGMLQVKTDEKLNVSDENTASCPLSPIKMCLNRPIEWNLNLTT
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 YGIPQKTLLLHLEALPAGKPASFKNKTRDFHDSYSYKDSKETCAVLQKVALWARAQAERT
NP_710 ASLTSCTVHNQNLKSEEK
310
>>XP_011512124 (OMIM: 611799) PREDICTED: ligand-dependen (1871 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 1797.3 bits: 344.2 E(85289): 2.3e-93
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
:::::::::::::::::::
XP_011 IKSEESSICDPSSENSVAGSTVDAKSEEATKMEKRKSALNKVLESLCIHHQQQVLAMLKF
250 260 270 280 290 300
>>XP_011512123 (OMIM: 611799) PREDICTED: ligand-dependen (1875 aa)
initn: 1732 init1: 1732 opt: 1732 Z-score: 1797.2 bits: 344.2 E(85289): 2.3e-93
Smith-Waterman score: 1732; 100.0% identity (100.0% similar) in 259 aa overlap (1-259:1-259)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
:::::::::::::::::::
XP_011 IKSEESSICDPSSENSVAGSTVDAKSEEATKMEKRKSALNKVLESLCIHHQQQVLAMLKF
250 260 270 280 290 300
>>XP_011512128 (OMIM: 611799) PREDICTED: ligand-dependen (231 aa)
initn: 1533 init1: 1533 opt: 1533 Z-score: 1604.6 bits: 305.6 E(85289): 1.2e-82
Smith-Waterman score: 1533; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQACYK
190 200 210 220 230
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
>>XP_011512127 (OMIM: 611799) PREDICTED: ligand-dependen (278 aa)
initn: 1533 init1: 1533 opt: 1533 Z-score: 1603.4 bits: 305.6 E(85289): 1.4e-82
Smith-Waterman score: 1533; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227)
10 20 30 40 50 60
pF1KE3 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRHRLMHCVGFESILEGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTS
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQELSAGAPVFSPSK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 IKSEESSICDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGIL
XP_011 PFSEEYLPVHKTHSQCSAPLTYHMRYISSVNCLHNLYF
250 260 270
>>XP_011512125 (OMIM: 611799) PREDICTED: ligand-dependen (1788 aa)
initn: 1037 init1: 1037 opt: 1037 Z-score: 1074.0 bits: 210.3 E(85289): 4.4e-53
Smith-Waterman score: 1037; 98.8% identity (100.0% similar) in 161 aa overlap (99-259:12-172)
70 80 90 100 110 120
pF1KE3 LSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQGQSNTDKI
..::::::::::::::::::::::::::::
XP_011 MDHGYEETSVYLKDCIPSLDSSQSTPTEELSSQGQSNTDKI
10 20 30 40
130 140 150 160 170 180
pF1KE3 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE3 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE3 CDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGILYGIPQKTL
:::::::::::
XP_011 CDPSSENSVAGSTVDAKSEEATKMEKRKSALNKVLESLCIHHQQQVLAMLKFLVQEQNAA
170 180 190 200 210 220
>>XP_016863451 (OMIM: 611799) PREDICTED: ligand-dependen (1788 aa)
initn: 1037 init1: 1037 opt: 1037 Z-score: 1074.0 bits: 210.3 E(85289): 4.4e-53
Smith-Waterman score: 1037; 98.8% identity (100.0% similar) in 161 aa overlap (99-259:12-172)
70 80 90 100 110 120
pF1KE3 LSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQGQSNTDKI
..::::::::::::::::::::::::::::
XP_016 MDHGYEETSVYLKDCIPSLDSSQSTPTEELSSQGQSNTDKI
10 20 30 40
130 140 150 160 170 180
pF1KE3 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE3 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE3 CDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGILYGIPQKTL
:::::::::::
XP_016 CDPSSENSVAGSTVDAKSEEATKMEKRKSALNKVLESLCIHHQQQVLAMLKFLVQEQNAA
170 180 190 200 210 220
>>XP_016863452 (OMIM: 611799) PREDICTED: ligand-dependen (1788 aa)
initn: 1037 init1: 1037 opt: 1037 Z-score: 1074.0 bits: 210.3 E(85289): 4.4e-53
Smith-Waterman score: 1037; 98.8% identity (100.0% similar) in 161 aa overlap (99-259:12-172)
70 80 90 100 110 120
pF1KE3 LSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCIPSLDSSQSTPTEELSSQGQSNTDKI
..::::::::::::::::::::::::::::
XP_016 MDHGYEETSVYLKDCIPSLDSSQSTPTEELSSQGQSNTDKI
10 20 30 40
130 140 150 160 170 180
pF1KE3 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ECQAENYLNALFRKKDLPQNCDPNIPLVAQELMKKMIRQFAIEYISKSGKTQENRNGSIG
50 60 70 80 90 100
190 200 210 220 230 240
pF1KE3 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSIVCKSIQMNQAENSLQEEQEGPLDLTVNRMQEQNTQQGDGVLDLSTKKTSIKSEESSI
110 120 130 140 150 160
250 260 270 280 290 300
pF1KE3 CDPSSENSVAGRLHRNREDYVERSAEFADGLLSKALKDIQSGALDINKAGILYGIPQKTL
:::::::::::
XP_016 CDPSSENSVAGSTVDAKSEEATKMEKRKSALNKVLESLCIHHQQQVLAMLKFLVQEQNAA
170 180 190 200 210 220
602 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:07:52 2016 done: Sun Nov 6 05:07:53 2016
Total Scan time: 9.770 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]