FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3088, 215 aa 1>>>pF1KE3088 215 - 215 aa - 215 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.4345+/-0.00119; mu= -4.8162+/- 0.070 mean_var=215.8250+/-44.520, 0's: 0 Z-trim(108.1): 28 B-trim: 66 in 1/52 Lambda= 0.087302 statistics sampled from 9993 (10004) to 9993 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.307), width: 16 Scan time: 2.200 The best scores are: opt bits E(32554) CCDS53767.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 215) 1337 180.7 6.3e-46 CCDS53766.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 172) 831 116.9 8e-27 CCDS8709.1 FGFR1OP2 gene_id:26127|Hs108|chr12 ( 253) 831 117.0 1.1e-26 CCDS878.1 SIKE1 gene_id:80143|Hs108|chr1 ( 207) 667 96.3 1.5e-20 CCDS41371.1 SIKE1 gene_id:80143|Hs108|chr1 ( 211) 654 94.6 4.8e-20 >>CCDS53767.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (215 aa) initn: 1337 init1: 1337 opt: 1337 Z-score: 938.1 bits: 180.7 E(32554): 6.3e-46 Smith-Waterman score: 1337; 100.0% identity (100.0% similar) in 215 aa overlap (1-215:1-215) 10 20 30 40 50 60 pF1KE3 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 GIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREIL 130 140 150 160 170 180 190 200 210 pF1KE3 QITRESFLNLRKDDASESTSLSALVTNSDLSLRKS ::::::::::::::::::::::::::::::::::: CCDS53 QITRESFLNLRKDDASESTSLSALVTNSDLSLRKS 190 200 210 >>CCDS53766.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (172 aa) initn: 828 init1: 828 opt: 831 Z-score: 595.1 bits: 116.9 E(32554): 8e-27 Smith-Waterman score: 831; 95.0% identity (97.9% similar) in 140 aa overlap (1-140:1-140) 10 20 30 40 50 60 pF1KE3 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREIL :::::::::::: ..: .. CCDS53 GIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNVH 130 140 150 160 170 >>CCDS8709.1 FGFR1OP2 gene_id:26127|Hs108|chr12 (253 aa) initn: 828 init1: 828 opt: 831 Z-score: 592.6 bits: 117.0 E(32554): 1.1e-26 Smith-Waterman score: 1218; 84.6% identity (84.6% similar) in 247 aa overlap (1-209:1-247) 10 20 30 40 50 60 pF1KE3 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQYQEEIQELNEVARHR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 PRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLLMASKKDDP 70 80 90 100 110 120 130 140 pF1KE3 GIIMKLKEQHSK--------------------------------------ELQAHVDQIT :::::::::::: :::::::::: CCDS87 GIIMKLKEQHSKIDMVHRNKSEGFFLDASRHILEAPQHGLERRHLEANQNELQAHVDQIT 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE3 EMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREILQITRESFLNLRKDDASESTSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 EMAAVMRKAIEIDEQQGCKEQERIFQLEQENKGLREILQITRESFLNLRKDDASESTSLS 190 200 210 220 230 240 210 pF1KE3 ALVTNSDLSLRKS ::::::: CCDS87 ALVTNSDLSLRKS 250 >>CCDS878.1 SIKE1 gene_id:80143|Hs108|chr1 (207 aa) initn: 740 init1: 441 opt: 667 Z-score: 482.3 bits: 96.3 E(32554): 1.5e-20 Smith-Waterman score: 667; 51.4% identity (81.2% similar) in 208 aa overlap (1-200:1-203) 10 20 30 40 50 pF1KE3 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMK--------QYQEEIQE ::::::: :.:::.:.::::.:: :::::..:..::..:: ::. ::::. .. CCDS87 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQYQEDASD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE3 LNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQMFRLL ........:. : .::: :::.:::::.:: ::::::.::::::::::.::..:. CCDS87 MKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLM 70 80 90 100 110 120 130 140 150 160 170 pF1KE3 MASKKDDPGIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQLEQE .:.: : ..: ...:: :.....:.: ::. :::::...:..: :: ::.. ::: : CCDS87 VAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQLELE 120 130 140 150 160 170 180 190 200 210 pF1KE3 NKGLREILQITRESFLNLRKDDASESTSLSALVTNSDLSLRKS :: :::.:.:. :: :. ::... ...: CCDS87 NKELRELLSISSES-LQARKENSMDTASQAIK 180 190 200 >>CCDS41371.1 SIKE1 gene_id:80143|Hs108|chr1 (211 aa) initn: 690 init1: 441 opt: 654 Z-score: 473.3 bits: 94.6 E(32554): 4.8e-20 Smith-Waterman score: 654; 50.0% identity (79.7% similar) in 212 aa overlap (1-200:1-207) 10 20 30 40 pF1KE3 MSCTIEKALADAKALVERLRDHDDAAESLIEQTTALNKRVEAMKQ------------YQE ::::::: :.:::.:.::::.:: :::::..:..::..:: ::.. ::: CCDS41 MSCTIEKILTDAKTLLERLREHDAAAESLVDQSAALHRRVAAMREAGTALPDQVRQRYQE 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 EIQELNEVARHRPRSTLVMGIQQENRQIRELQQENKELRTSLEEHQSALELIMSKYREQM . ..........:. : .::: :::.:::::.:: ::::::.::::::::::.:: CCDS41 DASDMKDMSKYKPHILL----SQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQM 70 80 90 100 110 110 120 130 140 150 160 pF1KE3 FRLLMASKKDDPGIIMKLKEQHSKELQAHVDQITEMAAVMRKAIEIDEQQGCKEQERIFQ ..:..:.: : ..: ...:: :.....:.: ::. :::::...:..: :: ::.. : CCDS41 LQLMVAKKAVDAEPVLKAHQSHSAEIESQIDRICEMGEVMRKAVQVDDDQFCKIQEKLAQ 120 130 140 150 160 170 170 180 190 200 210 pF1KE3 LEQENKGLREILQITRESFLNLRKDDASESTSLSALVTNSDLSLRKS :: ::: :::.:.:. :: :. ::... ...: CCDS41 LELENKELRELLSISSES-LQARKENSMDTASQAIK 180 190 200 210 215 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:14:31 2016 done: Sun Nov 6 05:14:32 2016 Total Scan time: 2.200 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]