FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7645, 328 aa 1>>>pF1KB7645 328 - 328 aa - 328 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.7168+/-0.000319; mu= 3.5140+/- 0.020 mean_var=249.8553+/-51.408, 0's: 0 Z-trim(124.1): 236 B-trim: 2301 in 1/58 Lambda= 0.081139 statistics sampled from 44929 (45201) to 44929 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.53), width: 16 Scan time: 8.770 The best scores are: opt bits E(85289) NP_004396 (OMIM: 126255) homeobox protein DLX-2 [H ( 328) 2256 276.2 6.5e-74 NP_005212 (OMIM: 220600,600028) homeobox protein D ( 289) 783 103.7 4.8e-22 NP_005211 (OMIM: 104510,190320,600525) homeobox pr ( 287) 735 98.1 2.3e-20 XP_016867292 (OMIM: 220600,600028) PREDICTED: home ( 161) 548 76.0 6e-14 XP_005250242 (OMIM: 220600,600028) PREDICTED: home ( 161) 548 76.0 6e-14 NP_005213 (OMIM: 600030) homeobox protein DLX-6 [H ( 293) 536 74.8 2.4e-13 NP_835221 (OMIM: 600029) homeobox protein DLX-1 is ( 255) 471 67.2 4.3e-11 NP_612138 (OMIM: 601911,616788) homeobox protein D ( 240) 426 61.9 1.6e-09 NP_001925 (OMIM: 601911,616788) homeobox protein D ( 168) 421 61.1 1.8e-09 XP_016879780 (OMIM: 601911,616788) PREDICTED: home ( 168) 421 61.1 1.8e-09 NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 318 49.3 1.2e-05 NP_149416 (OMIM: 607808) homeobox protein Nkx-2.4 ( 354) 288 45.9 0.00015 NP_002440 (OMIM: 123101,168500,168550,604757) home ( 267) 284 45.3 0.00017 NP_001129743 (OMIM: 217095,611770) homeobox protei ( 301) 285 45.5 0.00017 NP_660328 (OMIM: 606727) homeobox protein Nkx-2.3 ( 364) 285 45.5 0.0002 NP_005513 (OMIM: 142955,601536) homeobox protein H ( 335) 274 44.2 0.00046 NP_067545 (OMIM: 603260) homeobox protein BarH-lik ( 254) 268 43.4 0.00061 XP_011541345 (OMIM: 604823) PREDICTED: homeobox pr ( 233) 267 43.3 0.00062 NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 266 43.1 0.00069 NP_003649 (OMIM: 604823) homeobox protein BarH-lik ( 279) 267 43.3 0.00071 NP_001091639 (OMIM: 611074) brain-specific homeobo ( 233) 262 42.7 0.00093 NP_001795 (OMIM: 600746) homeobox protein CDX-1 [H ( 265) 263 42.8 0.00094 NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 262 42.8 0.0012 NP_005506 (OMIM: 142994,176450) motor neuron and p ( 401) 261 42.8 0.0015 NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 259 42.5 0.0015 XP_011533177 (OMIM: 600297) PREDICTED: homeobox pr ( 321) 258 42.3 0.0016 NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314) 257 42.2 0.0017 XP_005249787 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017 NP_705895 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.7 0.0017 NP_109377 (OMIM: 142954) homeobox protein Hox-A3 i ( 443) 260 42.7 0.0017 XP_005249788 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017 XP_011513645 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017 XP_005249789 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017 XP_006715778 (OMIM: 142954) PREDICTED: homeobox pr ( 443) 260 42.7 0.0017 XP_011533180 (OMIM: 600297) PREDICTED: homeobox pr ( 204) 251 41.3 0.0021 NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 255 42.0 0.0022 NP_055377 (OMIM: 600036) homeobox protein OTX1 [Ho ( 354) 254 41.9 0.0024 NP_001186699 (OMIM: 600036) homeobox protein OTX1 ( 354) 254 41.9 0.0024 NP_001256 (OMIM: 600297) homeobox protein CDX-2 [H ( 313) 252 41.6 0.0026 NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 253 41.8 0.0027 NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 250 41.4 0.0032 NP_705897 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 247 41.0 0.0034 NP_055435 (OMIM: 142974) homeobox protein Hox-C4 [ ( 264) 247 41.0 0.0034 NP_001158727 (OMIM: 142994,176450) motor neuron an ( 189) 242 40.2 0.0041 NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 247 41.1 0.0044 XP_011533181 (OMIM: 600297) PREDICTED: homeobox pr ( 196) 241 40.1 0.0045 NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 247 41.1 0.0046 NP_004378 (OMIM: 108900,187500,217095,225250,60058 ( 324) 245 40.8 0.0047 XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 242 40.4 0.0052 NP_001980 (OMIM: 142996) homeobox even-skipped hom ( 407) 245 40.9 0.0055 >>NP_004396 (OMIM: 126255) homeobox protein DLX-2 [Homo (328 aa) initn: 2256 init1: 2256 opt: 2256 Z-score: 1448.0 bits: 276.2 E(85289): 6.5e-74 Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL 250 260 270 280 290 300 310 320 pF1KB7 HPTQTPQPHHHHHHHGGGGAPVSAGTIF :::::::::::::::::::::::::::: NP_004 HPTQTPQPHHHHHHHGGGGAPVSAGTIF 310 320 >>NP_005212 (OMIM: 220600,600028) homeobox protein DLX-5 (289 aa) initn: 713 init1: 600 opt: 783 Z-score: 516.8 bits: 103.7 E(85289): 4.8e-22 Smith-Waterman score: 783; 52.6% identity (70.7% similar) in 270 aa overlap (43-302:23-280) 20 30 40 50 60 70 pF1KB7 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ .:...:.: ::::::: :.::::.::. NP_005 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS--- 10 20 30 40 80 90 100 110 120 pF1KB7 HPAGGGGGGG-SPY-AHMGS----YQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG :.::. : :: : .:. :::: :.:. : ::. : .:...: .:. NP_005 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA . :.:.:::: :::.:.::::::::::::::::::::::::::::::::::::::: NP_005 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF :::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :. NP_005 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE- 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB7 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP :: :.. : : :. : :.: . .. :: ....: ::: . : :: NP_005 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP 230 240 250 260 270 280 310 320 pF1KB7 TQTPQPHHHHHHHGGGGAPVSAGTIF NP_005 LALASGTLY >>NP_005211 (OMIM: 104510,190320,600525) homeobox protei (287 aa) initn: 668 init1: 532 opt: 735 Z-score: 486.5 bits: 98.1 E(85289): 2.3e-20 Smith-Waterman score: 754; 47.8% identity (65.4% similar) in 295 aa overlap (42-328:17-287) 20 30 40 50 60 70 pF1KB7 MHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHK-PQESPTLPVSTATDSSYYTNQ ::: : : ..::::: :..:: .::. NP_005 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAP 10 20 30 40 80 90 100 110 120 pF1KB7 QHPAGGGGGGG---SPYAHMGSYQYQASGLNNV-PYSAKSSYDLGYTAAYTSYAPYGTSS :: .: : .::.. .:.. .:: .. :: :: : : :.: .:. : . NP_005 QHDYYSGQPYGQTVNPYTY--HHQFNLNGLAGTGAYSPKSEYTYG--ASYRQYGAYREQP 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 SPANNEPE-KEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL ::.. ::. : :.:.:::::::::::::::::.:::::::::::.::::::::::: NP_005 LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 AASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGV ::.:::::::::::::::::::::..:.::.: :. :. : : : ::: .:: :: NP_005 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPP--SPALWD--- 170 180 190 200 210 250 260 270 280 290 300 pF1KB7 PQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGN--YPWYHQTSGSASHLQATAPLLHPT .. . :. . : : ::. ..: . ::: . :. ::: NP_005 ---TSSHSTPAPARSQLPPP--LPYSASPSYLDDPTNSWYHAQNLSGPHLQQ-------- 220 230 240 250 260 310 320 pF1KB7 QTPQPHHHHHHHGGGGAPVSAGTIF : ::: : :.. : : . :... NP_005 QPPQPATLH--HASPGPPPNPGAVY 270 280 >>XP_016867292 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa) initn: 509 init1: 483 opt: 548 Z-score: 371.4 bits: 76.0 E(85289): 6e-14 Smith-Waterman score: 548; 58.8% identity (73.8% similar) in 160 aa overlap (144-302:1-152) 120 130 140 150 160 170 pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK .::::::::::::::::::::::::::::: XP_016 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK 10 20 30 180 190 200 210 220 230 pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASP :::::::::::::::::::::::::::::.:::.::. :.::.: :. :..: : :: XP_016 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP 40 50 60 70 80 90 240 250 260 270 280 290 pF1KB7 PVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SH ..:: :. :: :.. : : :. : :.: . .. :: ....: :: XP_016 --QSPAVWE---PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSH 100 110 120 130 140 300 310 320 pF1KB7 LQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF : . : :: XP_016 LPPPGSLQHPLALASGTLY 150 160 >>XP_005250242 (OMIM: 220600,600028) PREDICTED: homeobox (161 aa) initn: 509 init1: 483 opt: 548 Z-score: 371.4 bits: 76.0 E(85289): 6e-14 Smith-Waterman score: 548; 58.8% identity (73.8% similar) in 160 aa overlap (144-302:1-152) 120 130 140 150 160 170 pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK .::::::::::::::::::::::::::::: XP_005 MVNGKPKKVRKPRTIYSSFQLAALQRRFQK 10 20 30 180 190 200 210 220 230 pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASP :::::::::::::::::::::::::::::.:::.::. :.::.: :. :..: : :: XP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP 40 50 60 70 80 90 240 250 260 270 280 290 pF1KB7 PVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SH ..:: :. :: :.. : : :. : :.: . .. :: ....: :: XP_005 --QSPAVWE---PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSH 100 110 120 130 140 300 310 320 pF1KB7 LQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF : . : :: XP_005 LPPPGSLQHPLALASGTLY 150 160 >>NP_005213 (OMIM: 600030) homeobox protein DLX-6 [Homo (293 aa) initn: 504 init1: 399 opt: 536 Z-score: 360.5 bits: 74.8 E(85289): 2.4e-13 Smith-Waterman score: 536; 41.9% identity (63.3% similar) in 248 aa overlap (24-269:40-282) 10 20 30 40 50 pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQES .:.:::: : .:..:: . NP_005 GLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPAMAGAHY 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB7 PTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYT : . .:. .. ...: ::::: :. .:. .: :: ..:... NP_005 PLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK . ..: : : .. .... . :::. ::: ::.:::::::::.:: ::..:::. NP_005 SYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQLQALNHRFQQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHP--GASASPPCA :::::::::::::::::::::::::::::.::::::. :.: : :. : :..: : NP_005 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQGSAALSP-R 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 SPPVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSAS :: . : :: .. . .. :.: : . ::: NP_005 SPAL--PPVWDVSASAKGVSMP-PNSYMPGYSHWYSSPHQDTMQRPQMM 250 260 270 280 290 300 310 320 pF1KB7 HLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF >>NP_835221 (OMIM: 600029) homeobox protein DLX-1 isofor (255 aa) initn: 426 init1: 394 opt: 471 Z-score: 320.1 bits: 67.2 E(85289): 4.3e-11 Smith-Waterman score: 471; 44.4% identity (63.8% similar) in 232 aa overlap (51-275:29-248) 30 40 50 60 70 80 pF1KB7 STYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGGG : ::. :.: . : . : :: . NP_835 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPS-PMS---HGHYSMHCLHSAGHSQPD 10 20 30 40 50 90 100 110 120 130 pF1KB7 GSPYAHMGSYQYQASG--LNNVPYSAKSSYDLGYTAAYTSYAPYGTSS--SPANNEPEKE :. :. .:.. . .:.: :.: : .. . .: . : . : .:. . .. NP_835 GA-YSSASSFSRPLGYPYVNSVSSHASSPY-ISSVQSYPGSASLAQSRLEDPGADSEKST 60 70 80 90 100 110 140 150 160 170 180 190 pF1KB7 DLEP-EIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ .: :.:. ::: ::.:::::::::.:: ::.::::.:::::::::::::::::::::: NP_835 VVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQ 120 130 140 150 160 170 200 210 220 230 240 250 pF1KB7 VKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCA-SPPVSAPASWDFGVPQRMAGGGG :::::::.::::::. :.: : :.. : :::: : .:. :. .: :. NP_835 VKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPV--PPGWN---PNSSSGKGS 180 190 200 210 220 260 270 280 290 300 310 pF1KB7 PGSGGSGAGSSGS-SPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHH :..:: : : ::. : NP_835 GGNAGSYIPSYTSWYPSAHQEAMQQPQLM 230 240 250 >>NP_612138 (OMIM: 601911,616788) homeobox protein DLX-4 (240 aa) initn: 360 init1: 337 opt: 426 Z-score: 292.0 bits: 61.9 E(85289): 1.6e-09 Smith-Waterman score: 426; 46.0% identity (64.0% similar) in 189 aa overlap (83-264:50-224) 60 70 80 90 100 110 pF1KB7 SPTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGY ::.:. :: : : . .:: NP_612 DLAPVPSVAAAYPLGLSPTTAASPNLSYSRPYGHLLSYPYTE------PANPGDSYLSCQ 20 30 40 50 60 70 120 130 140 150 160 pF1KB7 TAAYTSYAPYGTSSSP----ANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQ : : : . : :..: . . :: : .. ::.:::::::::.:: :. NP_612 QPAALSQPLCGPAEHPQELEADSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLN 80 90 100 110 120 130 170 180 190 200 210 220 pF1KB7 RRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSE-QHPGASAS .:::.::::::::::.:::.::::::::::::::.:::.::. :.. .: . :: . : NP_612 QRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFS 140 150 160 170 180 190 230 240 250 260 270 280 pF1KB7 -PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSGSSPSSAASAFLGNYPWYHQ :: :::. :. ::. :. .: : :: :.. :. NP_612 VSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWYQHHSSDVLASPQMM 200 210 220 230 240 290 300 310 320 pF1KB7 TSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF >>NP_001925 (OMIM: 601911,616788) homeobox protein DLX-4 (168 aa) initn: 404 init1: 365 opt: 421 Z-score: 290.8 bits: 61.1 E(85289): 1.8e-09 Smith-Waterman score: 421; 52.0% identity (72.3% similar) in 148 aa overlap (120-264:13-152) 90 100 110 120 130 140 pF1KB7 YQYQASGLNNVPYSAKSSYDLGYTAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKP ::: . : ..: . . :: : .. NP_001 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPA 10 20 30 40 150 160 170 180 190 200 pF1KB7 KKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKK ::.:::::::::.:: :..:::.::::::::::.:::.::::::::::::::.:::.:: NP_001 KKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKK 50 60 70 80 90 100 210 220 230 240 250 260 pF1KB7 MWKSGEIPSE-QHPGASAS-PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSG . :.. .: . :: . : :: :::. :. ::. :. .: : :: :.. :. NP_001 LLKQNSGGQEGDFPGRTFSVSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWY 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 SSPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGT NP_001 QHHSSDVLASPQMM 160 >>XP_016879780 (OMIM: 601911,616788) PREDICTED: homeobox (168 aa) initn: 404 init1: 365 opt: 421 Z-score: 290.8 bits: 61.1 E(85289): 1.8e-09 Smith-Waterman score: 421; 52.0% identity (72.3% similar) in 148 aa overlap (120-264:13-152) 90 100 110 120 130 140 pF1KB7 YQYQASGLNNVPYSAKSSYDLGYTAAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKP ::: . : ..: . . :: : .. XP_016 MKLSVLPPRSLLAPYTVLCCPPDSEKPRLSPEPSERRPQAPA 10 20 30 40 150 160 170 180 190 200 pF1KB7 KKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKK ::.:::::::::.:: :..:::.::::::::::.:::.::::::::::::::.:::.:: XP_016 KKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKK 50 60 70 80 90 100 210 220 230 240 250 260 pF1KB7 MWKSGEIPSE-QHPGASAS-PPCASPPVSAPASWDFGVPQRMAGGGGPGSG-GSGAGSSG . :.. .: . :: . : :: :::. :. ::. :. .: : :: :.. :. XP_016 LLKQNSGGQEGDFPGRTFSVSPC-SPPL--PSLWDL--PK---AGTLPTSGYGNSFGAWY 110 120 130 140 150 270 280 290 300 310 320 pF1KB7 SSPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGT XP_016 QHHSSDVLASPQMM 160 328 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:30:30 2016 done: Sun Nov 6 05:30:32 2016 Total Scan time: 8.770 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]