FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7645, 328 aa 1>>>pF1KB7645 328 - 328 aa - 328 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4514+/-0.000801; mu= 5.2179+/- 0.049 mean_var=235.6011+/-49.159, 0's: 0 Z-trim(116.4): 165 B-trim: 965 in 1/52 Lambda= 0.083558 statistics sampled from 16833 (17015) to 16833 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.523), width: 16 Scan time: 2.980 The best scores are: opt bits E(32554) CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 ( 328) 2256 283.9 1.2e-76 CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 ( 289) 783 106.3 3.1e-23 CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 ( 287) 735 100.5 1.7e-21 CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 ( 293) 536 76.5 2.9e-14 CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 ( 255) 471 68.6 6e-12 >>CCDS2248.1 DLX2 gene_id:1746|Hs108|chr2 (328 aa) initn: 2256 init1: 2256 opt: 2256 Z-score: 1489.5 bits: 283.9 E(32554): 1.2e-76 Smith-Waterman score: 2256; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVST 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 ATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYTAAYTSYA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 PYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 ERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPAS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 WDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSASHLQATAPLL 250 260 270 280 290 300 310 320 pF1KB7 HPTQTPQPHHHHHHHGGGGAPVSAGTIF :::::::::::::::::::::::::::: CCDS22 HPTQTPQPHHHHHHHGGGGAPVSAGTIF 310 320 >>CCDS5647.1 DLX5 gene_id:1749|Hs108|chr7 (289 aa) initn: 713 init1: 600 opt: 783 Z-score: 530.6 bits: 106.3 E(32554): 3.1e-23 Smith-Waterman score: 783; 52.6% identity (70.7% similar) in 270 aa overlap (43-302:23-280) 20 30 40 50 60 70 pF1KB7 HSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKP-QESPTLPVSTATDSSYYTNQQ .:...:.: ::::::: :.::::.::. CCDS56 MTGVFDRRVPSIRSGDFQAPFQTSAAMHHPSQESPTLPESSATDSDYYS--- 10 20 30 40 80 90 100 110 120 pF1KB7 HPAGGGGGGG-SPY-AHMGS----YQYQASGLNNVP--YSAKSSYDLGYTAAYTSYAPYG :.::. : :: : .:. :::: :.:. : ::. : .:...: .:. CCDS56 -PTGGAPHGYCSPTSASYGKALNPYQYQYHGVNGSAGSYPAKAYADYSYASSYHQYGGAY 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 TSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA . :.:.:::: :::.:.::::::::::::::::::::::::::::::::::::::: CCDS56 NRVPSATNQPEKEVTEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 ELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDF :::::::::::::::::::.:::.::. :.::.: :. :..: : :: ..:: :. CCDS56 ELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSP--QSPAVWE- 170 180 190 200 210 220 250 260 270 280 290 300 pF1KB7 GVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSA-SHLQATAPLLHP :: :.. : : :. : :.: . .. :: ....: ::: . : :: CCDS56 --PQ---GSSRSLSHHPHAHPPTSNQSPASSYLENSASWYTSAASSINSHLPPPGSLQHP 230 240 250 260 270 280 310 320 pF1KB7 TQTPQPHHHHHHHGGGGAPVSAGTIF CCDS56 LALASGTLY >>CCDS11556.1 DLX3 gene_id:1747|Hs108|chr17 (287 aa) initn: 668 init1: 532 opt: 735 Z-score: 499.3 bits: 100.5 E(32554): 1.7e-21 Smith-Waterman score: 754; 47.8% identity (65.4% similar) in 295 aa overlap (42-328:17-287) 20 30 40 50 60 70 pF1KB7 MHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHK-PQESPTLPVSTATDSSYYTNQ ::: : : ..::::: :..:: .::. CCDS11 MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYSAP 10 20 30 40 80 90 100 110 120 pF1KB7 QHPAGGGGGGG---SPYAHMGSYQYQASGLNNV-PYSAKSSYDLGYTAAYTSYAPYGTSS :: .: : .::.. .:.. .:: .. :: :: : : :.: .:. : . CCDS11 QHDYYSGQPYGQTVNPYTY--HHQFNLNGLAGTGAYSPKSEYTYG--ASYRQYGAYREQP 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB7 SPANNEPE-KEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAEL ::.. ::. : :.:.:::::::::::::::::.:::::::::::.::::::::::: CCDS11 LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAEL 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB7 AASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCASPPVSAPASWDFGV ::.:::::::::::::::::::::..:.::.: :. :. : : : ::: .:: :: CCDS11 AAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPP--SPALWD--- 170 180 190 200 210 250 260 270 280 290 300 pF1KB7 PQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGN--YPWYHQTSGSASHLQATAPLLHPT .. . :. . : : ::. ..: . ::: . :. ::: CCDS11 ---TSSHSTPAPARSQLPPP--LPYSASPSYLDDPTNSWYHAQNLSGPHLQQ-------- 220 230 240 250 260 310 320 pF1KB7 QTPQPHHHHHHHGGGGAPVSAGTIF : ::: : :.. : : . :... CCDS11 QPPQPATLH--HASPGPPPNPGAVY 270 280 >>CCDS47647.2 DLX6 gene_id:1750|Hs108|chr7 (293 aa) initn: 504 init1: 399 opt: 536 Z-score: 369.6 bits: 76.5 E(32554): 2.9e-14 Smith-Waterman score: 536; 41.9% identity (63.3% similar) in 248 aa overlap (24-269:40-282) 10 20 30 40 50 pF1KB7 MTGVFDSLVADMHSTQIAASSTYHQHQQPPSGGGAGPGGNSSSSSSLHKPQES .:.:::: : .:..:: . CCDS47 GLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQPPPPPPPPPQPHSQQSSPAMAGAHY 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB7 PTLPVSTATDSSYYTNQQHPAGGGGGGGSPYAHMGSYQYQASGLNNVPYSAKSSYDLGYT : . .:. .. ...: ::::: :. .:. .: :: ..:... CCDS47 PLHCLHSAAAAAAAGSHHHHHHQHHHHGSPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB7 AAYTSYAPYGTSSSPANNEPEKEDLEPEIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQK . ..: : : .. .... . :::. ::: ::.:::::::::.:: ::..:::. CCDS47 SYHNSSAAAQTRGDDTDQQKTTVIENGEIRF-NGKGKKIRKPRTIYSSLQLQALNHRFQQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB7 TQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPSEQHP--GASASPPCA :::::::::::::::::::::::::::::.::::::. :.: : :. : :..: : CCDS47 TQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLQGSAALSP-R 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB7 SPPVSAPASWDFGVPQRMAGGGGPGSGGSGAGSSGSSPSSAASAFLGNYPWYHQTSGSAS :: . : :: .. . .. :.: : . ::: CCDS47 SPAL--PPVWDVSASAKGVSMP-PNSYMPGYSHWYSSPHQDTMQRPQMM 250 260 270 280 290 300 310 320 pF1KB7 HLQATAPLLHPTQTPQPHHHHHHHGGGGAPVSAGTIF >>CCDS2247.2 DLX1 gene_id:1745|Hs108|chr2 (255 aa) initn: 426 init1: 394 opt: 471 Z-score: 328.0 bits: 68.6 E(32554): 6e-12 Smith-Waterman score: 471; 44.4% identity (63.8% similar) in 232 aa overlap (51-275:29-248) 30 40 50 60 70 80 pF1KB7 STYHQHQQPPSGGGAGPGGNSSSSSSLHKPQESPTLPVSTATDSSYYTNQQHPAGGGGGG : ::. :.: . : . : :: . CCDS22 MTMTTMPESLNSPVSGKAVFMEFGPPNQQMSPS-PMS---HGHYSMHCLHSAGHSQPD 10 20 30 40 50 90 100 110 120 130 pF1KB7 GSPYAHMGSYQYQASG--LNNVPYSAKSSYDLGYTAAYTSYAPYGTSS--SPANNEPEKE :. :. .:.. . .:.: :.: : .. . .: . : . : .:. . .. CCDS22 GA-YSSASSFSRPLGYPYVNSVSSHASSPY-ISSVQSYPGSASLAQSRLEDPGADSEKST 60 70 80 90 100 110 140 150 160 170 180 190 pF1KB7 DLEP-EIRIVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQ .: :.:. ::: ::.:::::::::.:: ::.::::.:::::::::::::::::::::: CCDS22 VVEGGEVRF-NGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQ 120 130 140 150 160 170 200 210 220 230 240 250 pF1KB7 VKIWFQNRRSKFKKMWKSGEIPSEQHPGASASPPCA-SPPVSAPASWDFGVPQRMAGGGG :::::::.::::::. :.: : :.. : :::: : .:. :. .: :. CCDS22 VKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAGSPPV--PPGWN---PNSSSGKGS 180 190 200 210 220 260 270 280 290 300 310 pF1KB7 PGSGGSGAGSSGS-SPSSAASAFLGNYPWYHQTSGSASHLQATAPLLHPTQTPQPHHHHH :..:: : : ::. : CCDS22 GGNAGSYIPSYTSWYPSAHQEAMQQPQLM 230 240 250 328 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:30:30 2016 done: Sun Nov 6 05:30:30 2016 Total Scan time: 2.980 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]