Result of FASTA (omim) for pFN21AE3066
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3066, 221 aa
  1>>>pF1KE3066 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1620+/-0.000472; mu= 14.7791+/- 0.029
 mean_var=87.4379+/-16.789, 0's: 0 Z-trim(112.3): 414  B-trim: 491 in 1/52
 Lambda= 0.137159
 statistics sampled from 20662 (21169) to 20662 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.248), width:  16
 Scan time:  5.070

The best scores are:                                      opt bits E(85289)
NP_001017979 (OMIM: 612994,615374) ras-related pro ( 221) 1444 295.7   4e-80
NP_004240 (OMIM: 612994,615374) ras-related protei ( 220) 1316 270.4 1.7e-72
XP_011512213 (OMIM: 612994,615374) PREDICTED: ras- ( 194) 1243 255.9 3.4e-68
XP_016864339 (OMIM: 612994,615374) PREDICTED: ras- ( 200) 1243 255.9 3.5e-68
NP_001153073 (OMIM: 612994,615374) ras-related pro ( 204) 1243 255.9 3.5e-68
XP_011512214 (OMIM: 612994,615374) PREDICTED: ras- ( 144)  941 196.0 2.7e-50
XP_005248275 (OMIM: 612994,615374) PREDICTED: ras- ( 136)  842 176.4   2e-44
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  371 83.4 3.2e-16
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  366 82.4 6.1e-16
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218)  358 80.8 1.9e-15
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  350 79.2 5.6e-15
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213)  349 79.0 6.5e-15
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244)  345 78.3 1.2e-14
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219)  344 78.0 1.3e-14
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219)  344 78.0 1.3e-14
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  343 77.9 1.5e-14
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  343 77.9 1.6e-14
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  338 76.9   3e-14
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  336 76.5   4e-14
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  334 76.0 4.9e-14
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  334 76.0   5e-14
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  333 75.9   6e-14
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  333 75.9   6e-14
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  332 75.7 6.7e-14
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208)  331 75.5 7.6e-14
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  330 75.3 8.7e-14
NP_004242 (OMIM: 300284) ras-related protein Rab-9 ( 201)  329 75.0 9.7e-14
XP_016885453 (OMIM: 300284) PREDICTED: ras-related ( 201)  329 75.0 9.7e-14
NP_001182257 (OMIM: 300284) ras-related protein Ra ( 201)  329 75.0 9.7e-14
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208)  329 75.1   1e-13
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  327 74.6 1.3e-13
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213)  327 74.7 1.3e-13
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208)  326 74.5 1.5e-13
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  326 74.5 1.5e-13
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155)  324 73.9 1.6e-13
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  323 73.9 2.2e-13
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207)  323 73.9 2.3e-13
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  323 73.9 2.3e-13
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206)  322 73.7 2.6e-13
NP_057454 (OMIM: 300285) ras-related protein Rab-9 ( 201)  321 73.5 2.9e-13
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216)  320 73.3 3.5e-13
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223)  318 72.9 4.7e-13
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  317 72.8   6e-13
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218)  315 72.3   7e-13
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196)  314 72.1 7.5e-13
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228)  314 72.1 8.3e-13
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254)  312 71.8 1.2e-12
NP_114140 (OMIM: 610917) ras-related protein Rab-3 ( 259)  307 70.8 2.4e-12
NP_001243207 (OMIM: 610917) ras-related protein Ra ( 259)  307 70.8 2.4e-12
NP_001243206 (OMIM: 610917) ras-related protein Ra ( 259)  307 70.8 2.4e-12


>>NP_001017979 (OMIM: 612994,615374) ras-related protein  (221 aa)
 initn: 1444 init1: 1444 opt: 1444  Z-score: 1559.5  bits: 295.7 E(85289): 4e-80
Smith-Waterman score: 1444; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       :::::::::::::::::::::::::::::::::::::::::
NP_001 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
              190       200       210       220 

>>NP_004240 (OMIM: 612994,615374) ras-related protein Ra  (220 aa)
 initn: 1296 init1: 1296 opt: 1316  Z-score: 1422.6  bits: 270.4 E(85289): 1.7e-72
Smith-Waterman score: 1316; 91.9% identity (97.3% similar) in 221 aa overlap (1-221:1-220)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       ::::::::::::.:.:.::.: .:  ..:..  .: .:.::
NP_004 KLNKAEIEQSQRIVRAEIVKYPEEENQHTTST-QSRICSVQ
              190       200       210        220

>>XP_011512213 (OMIM: 612994,615374) PREDICTED: ras-rela  (194 aa)
 initn: 1243 init1: 1243 opt: 1243  Z-score: 1345.3  bits: 255.9 E(85289): 3.4e-68
Smith-Waterman score: 1243; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       :::::::::::                              
XP_011 KLNKAEIEQSQCWP                           
              190                               

>>XP_016864339 (OMIM: 612994,615374) PREDICTED: ras-rela  (200 aa)
 initn: 1243 init1: 1243 opt: 1243  Z-score: 1345.1  bits: 255.9 E(85289): 3.5e-68
Smith-Waterman score: 1243; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       :::::::::::                              
XP_016 KLNKAEIEQSQMKGSLRRNE                     
              190       200                     

>>NP_001153073 (OMIM: 612994,615374) ras-related protein  (204 aa)
 initn: 1243 init1: 1243 opt: 1243  Z-score: 1345.0  bits: 255.9 E(85289): 3.5e-68
Smith-Waterman score: 1243; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
              130       140       150       160       170       180

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       :::::::::::                              
NP_001 KLNKAEIEQSQGHFIIFISSTNRE                 
              190       200                     

>>XP_011512214 (OMIM: 612994,615374) PREDICTED: ras-rela  (144 aa)
 initn: 941 init1: 941 opt: 941  Z-score: 1024.0  bits: 196.0 E(85289): 2.7e-50
Smith-Waterman score: 941; 100.0% identity (100.0% similar) in 144 aa overlap (78-221:1-144)

        50        60        70        80        90       100       
pF1KE3 DFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDW
                                     ::::::::::::::::::::::::::::::
XP_011                               MLDKYIYGAQGVLLVYDITNYQSFENLEDW
                                             10        20        30

       110       120       130       140       150       160       
pF1KE3 YTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YTVVKKVSEESETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVF
               40        50        60        70        80        90

       170       180       190       200       210       220 
pF1KE3 LCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
              100       110       120       130       140    

>>XP_005248275 (OMIM: 612994,615374) PREDICTED: ras-rela  (136 aa)
 initn: 842 init1: 842 opt: 842  Z-score: 918.4  bits: 176.4 E(85289): 2e-44
Smith-Waterman score: 842; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       ::::::::::                                                  
XP_005 QPLVALVGNKRKQHGL                                            
              130                                                  

>>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i  (216 aa)
 initn: 317 init1: 137 opt: 371  Z-score: 412.1  bits: 83.4 E(85289): 3.2e-16
Smith-Waterman score: 371; 30.9% identity (64.5% similar) in 217 aa overlap (4-218:3-213)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
          ....  :  .:.:..::.. ::..: . :... :. . :.:::..:  : : . :. 
NP_004  MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK-
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ..  :::: .::     . . :  :: :.::::::... ..::.: :   .:.. .....
NP_004 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW---LKELRDHADS
       60        70        80        90       100          110     

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       . .. ::::: ::.:.:..  ..   : ..::.:   .::  . .:   :: . .::  :
NP_004 NIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI
         120       130       140       150       160       170     

                190       200       210       220 
pF1KE3 KLNK--AEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
         .:  .. ....   . ..:  .  :   : : :. . :   
NP_004 VSQKQMSDRRENDMSPSNNVVPIHVPP--TTENKPKVQCCQNI
         180       190       200         210      

>>NP_002861 (OMIM: 602672) ras-related protein Rab-13 is  (203 aa)
 initn: 347 init1: 166 opt: 366  Z-score: 407.1  bits: 82.4 E(85289): 6.1e-16
Smith-Waterman score: 366; 34.9% identity (69.2% similar) in 172 aa overlap (7-178:3-170)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
             .. :. .:....::.. ::: :   ::...:.. : .:::.:: .: . . :. 
NP_002     MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGK-
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       .. ::.:: .::     .   :  ::.:..::::::. .::::...:   .:...:.. .
NP_002 KIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW---MKSIKENASA
          60        70        80        90       100          110  

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
            :.::: :.:  : .. :.  .. .:.:.    .:::.. .:   :...: .::  
NP_002 GVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK
            120       130       140       150       160       170  

              190       200       210       220 
pF1KE3 KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
                                                
NP_002 SGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG          
            180       190       200             

>>NP_004209 (OMIM: 604198) ras-related protein Rab-11B [  (218 aa)
 initn: 304 init1: 137 opt: 358  Z-score: 398.2  bits: 80.8 E(85289): 1.9e-15
Smith-Waterman score: 358; 29.5% identity (64.1% similar) in 217 aa overlap (4-218:3-215)

               10        20        30        40        50        60
pF1KE3 MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
          ....  :  .:.:..::.. ::..: . :... :. . :.:::..:  : : . :. 
NP_004  MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK-
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KE3 NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
       ..  :::: .::     . . :  :: :.::::::... ..::.: :   .:.. .....
NP_004 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERW---LKELRDHADS
       60        70        80        90       100          110     

              130       140       150       160       170       180
pF1KE3 QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
       . .. ::::: ::.:.:..  ..   : ..:..:   .::  . .:   :... .::  :
NP_004 NIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI
         120       130       140       150       160       170     

                190       200       210       220 
pF1KE3 KLNK--AEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
         .:  :.    ..    ..:. .  : .   .: . . :   
NP_004 VSQKQIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
         180       190       200       210        




221 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:02:33 2016 done: Sun Nov  6 06:02:34 2016
 Total Scan time:  5.070 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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