Result of FASTA (omim) for pFN21AE3059
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3059, 213 aa
  1>>>pF1KE3059 213 - 213 aa - 213 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3547+/-0.000409; mu= 13.0872+/- 0.026
 mean_var=79.6055+/-15.643, 0's: 0 Z-trim(113.2): 445  B-trim: 331 in 1/53
 Lambda= 0.143748
 statistics sampled from 21986 (22503) to 21986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.264), width:  16
 Scan time:  6.130

The best scores are:                                      opt bits E(85289)
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 1395 298.9 4.2e-81
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 1239 266.5 2.3e-71
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215)  821 179.8 2.9e-45
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216)  713 157.4 1.6e-38
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212)  694 153.5 2.4e-37
NP_001258927 (OMIM: 179511) ras-related protein Ra ( 113)  612 136.3   2e-32
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218)  580 129.8 3.2e-30
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207)  570 127.8 1.3e-29
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216)  567 127.1 2.1e-29
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188)  563 126.3 3.3e-29
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213)  561 125.9 4.9e-29
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205)  549 123.4 2.7e-28
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203)  543 122.2 6.2e-28
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201)  541 121.7 8.3e-28
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207)  537 120.9 1.5e-27
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213)  537 120.9 1.5e-27
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215)  537 120.9 1.5e-27
NP_001156852 (OMIM: 607466) ras-related protein Ra ( 170)  534 120.2   2e-27
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203)  528 119.0 5.4e-27
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203)  528 119.0 5.4e-27
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203)  528 119.0 5.4e-27
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203)  528 119.0 5.4e-27
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200)  512 115.7 5.3e-26
NP_001193765 (OMIM: 605570) ras-related protein Ra ( 155)  505 114.2 1.2e-25
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223)  492 111.6   1e-24
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201)  488 110.7 1.7e-24
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216)  481 109.3 4.9e-24
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196)  478 108.7 6.9e-24
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228)  478 108.7 7.8e-24
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215)  477 108.5 8.6e-24
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244)  474 107.9 1.5e-23
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256)  474 107.9 1.5e-23
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216)  470 107.0 2.4e-23
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216)  470 107.0 2.4e-23
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216)  470 107.0 2.4e-23
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216)  470 107.0 2.4e-23
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249)  470 107.1 2.6e-23
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219)  468 106.6 3.2e-23
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219)  468 106.6 3.2e-23
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212)  466 106.2 4.1e-23
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215)  463 105.6 6.4e-23
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215)  463 105.6 6.4e-23
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215)  463 105.6 6.4e-23
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215)  463 105.6 6.4e-23
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225)  461 105.2 8.9e-23
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227)  461 105.2   9e-23
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237)  461 105.2 9.3e-23
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219)  460 105.0   1e-22
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220)  459 104.8 1.2e-22
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220)  459 104.8 1.2e-22


>>NP_057238 (OMIM: 612945) ras-related protein Rab-4B [H  (213 aa)
 initn: 1395 init1: 1395 opt: 1395  Z-score: 1577.1  bits: 298.9 E(85289): 4.2e-81
Smith-Waterman score: 1395; 100.0% identity (100.0% similar) in 213 aa overlap (1-213:1-213)

               10        20        30        40        50        60
pF1KE3 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
              130       140       150       160       170       180

              190       200       210   
pF1KE3 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
       :::::::::::::::::::::::::::::::::
NP_057 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
              190       200       210   

>>NP_004569 (OMIM: 179511) ras-related protein Rab-4A is  (218 aa)
 initn: 1239 init1: 1239 opt: 1239  Z-score: 1402.1  bits: 266.5 E(85289): 2.3e-71
Smith-Waterman score: 1239; 87.3% identity (94.8% similar) in 213 aa overlap (1-213:6-218)

                    10        20        30        40        50     
pF1KE3      MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGK
            :.:::::::::::::.::::::::::::::.:::.::::::::::::...:::::
NP_004 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK
               10        20        30        40        50        60

          60        70        80        90       100       110     
pF1KE3 TVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIV
        :::::::::::::::::::::::::::::::::::::::::.:. :::::: ::: :::
NP_004 YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIV
               70        80        90       100       110       120

         120       130       140       150       160       170     
pF1KE3 VILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDS
       .:::::::::: .::::::::::::::::::::::::::::::::::..::: :::::.:
NP_004 IILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIES
              130       140       150       160       170       180

         180       190       200       210   
pF1KE3 GELDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
       :::::::::::::::::.:::::.:: :::   : :::
NP_004 GELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
              190       200       210        

>>NP_057406 (OMIM: 612673) ras-related protein Rab-14 [H  (215 aa)
 initn: 834 init1: 788 opt: 821  Z-score: 933.7  bits: 179.8 E(85289): 2.9e-45
Smith-Waterman score: 821; 57.9% identity (81.8% similar) in 214 aa overlap (5-213:8-215)

                  10        20        30        40        50       
pF1KE3    MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTV
              :...::...::. :.::::::::: :.::  :  ::::::::.:...:.:. .
NP_057 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE3 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVI
       ::::::::::::::.:::::::::::::.::::: : ::: :..::::::.:..:: :.:
NP_057 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE3 LCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGE
       : ::: ::. .:.::. ::..::.:: :.:::.:: ::::::.:::. :. : ..:..: 
NP_057 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
              130       140       150       160       170       180

       180       190       200        210       
pF1KE3 LDPERMGSGIQYGDASLRQLRQPRSAQAVA-PQP----CGC
       :: .   ::.:.  ..      :.... .. :::    :::
NP_057 LDLNAAESGVQHKPSA------PQGGRLTSEPQPQREGCGC
              190             200       210     

>>NP_116235 (OMIM: 607466) ras-related protein Rab-2B is  (216 aa)
 initn: 711 init1: 711 opt: 713  Z-score: 812.6  bits: 157.4 E(85289): 1.6e-38
Smith-Waterman score: 713; 55.0% identity (78.7% similar) in 202 aa overlap (4-204:2-203)

               10        20        30        40        50        60
pF1KE3 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
          :: .:::...::..:.:::::: :: ...:.   . :::::::.:.::. :: .:::
NP_116   MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE3 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
       :::::::: :::.:::::::::::::::::: :::.: :..:: :::  .: :.:..: :
NP_116 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KE3 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
       ::.::. .:.:   :.  ::.:. :.:.:::: :. ::::::.. :. :  ::..: .: 
NP_116 NKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDV
      120       130       140       150       160       170        

              190        200       210       
pF1KE3 ERMGSGIQYG-DASLRQLRQPRSAQAVAPQPCGC    
       .  ..::. : . :.     : ..:             
NP_116 HNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
      180       190       200       210      

>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is  (212 aa)
 initn: 694 init1: 694 opt: 694  Z-score: 791.4  bits: 153.5 E(85289): 2.4e-37
Smith-Waterman score: 694; 55.9% identity (81.2% similar) in 186 aa overlap (5-190:3-188)

               10        20        30        40        50        60
pF1KE3 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
           : .:::...::..:.:::::: :: ...:.   . :::::::.:.... :: .:::
NP_002   MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE3 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
       :::::::: :::.:::::::::::::::::: :.:.: :..:: :::  .. :.:..: :
NP_002 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIG
       60        70        80        90       100       110        

              130       140       150       160       170       180
pF1KE3 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
       ::.::. .:::   :.  ::.:. :.:.:::: :. ::::::.. :. : .::. : .: 
NP_002 NKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDI
      120       130       140       150       160       170        

              190       200       210    
pF1KE3 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC 
       .  ..::. :                        
NP_002 NNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
      180       190       200       210  

>>NP_001258927 (OMIM: 179511) ras-related protein Rab-4A  (113 aa)
 initn: 612 init1: 612 opt: 612  Z-score: 703.3  bits: 136.3 E(85289): 2e-32
Smith-Waterman score: 612; 85.3% identity (91.7% similar) in 109 aa overlap (105-213:5-113)

           80        90       100       110       120       130    
pF1KE3 RSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFL
                                     ::: ::: :::.:::::::::: .::::::
NP_001                           MISPDARMLASQNIVIILCGNKKDLDADREVTFL
                                         10        20        30    

          140       150       160       170       180       190    
pF1KE3 EASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDASL
       ::::::::::::::::::::::::::::..::: :::::.::::::::::::::::::.:
NP_001 EASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQYGDAAL
           40        50        60        70        80        90    

          200       210   
pF1KE3 RQLRQPRSAQAVAPQPCGC
       ::::.:: :::   : :::
NP_001 RQLRSPRRAQAPNAQECGC
          100       110   

>>NP_004209 (OMIM: 604198) ras-related protein Rab-11B [  (218 aa)
 initn: 573 init1: 573 opt: 580  Z-score: 663.5  bits: 129.8 E(85289): 3.2e-30
Smith-Waterman score: 580; 46.4% identity (72.5% similar) in 211 aa overlap (3-213:6-214)

                  10        20        30        40        50       
pF1KE3    MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTV
            . ::.::: ..::..:.::: :: .: .:.:. .:. ::::::..: ..: :::.
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE3 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVI
       : ::::::::::.:..: .:::::.::::::::... ::...  :: . :  :. :::..
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE3 LCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGE
       : :::.::   : :   ::  ::..:.: :.::::: . :::::: :   : . .: : .
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAF-KNILTEIYRIVSQK
              130       140       150       160        170         

       180       190       200       210       
pF1KE3 LDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC    
          .: .   . :. .. ..  : ....  :.   :    
NP_004 QIADRAAHDESPGN-NVVDISVPPTTDGQKPNKLQCCQNL
     180       190        200       210        

>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H  (207 aa)
 initn: 555 init1: 555 opt: 570  Z-score: 652.6  bits: 127.8 E(85289): 1.3e-29
Smith-Waterman score: 570; 41.9% identity (73.9% similar) in 203 aa overlap (1-203:1-200)

               10        20        30        40        50        60
pF1KE3 MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
       ::.:::.:::.:.::..:.::.::: .: :. :.     :::..:  :.... :: .:::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG
       :::::::::::..: .::::: : .::::::........  :. . .  :: ..  .. :
NP_057 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP
       :: :.. .:.:.  .. ..: .  . :::::: .. ::::::.  :: :..:..    : 
NP_057 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS
              130       140       150       160       170       180

              190       200       210   
pF1KE3 ERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC
       .  :.:   : ... . :. ...          
NP_057 NSAGAG---GPVKITENRSKKTSFFRCSLL   
                 190       200          

>>NP_004654 (OMIM: 605570) ras-related protein Rab-11A i  (216 aa)
 initn: 563 init1: 563 opt: 567  Z-score: 649.0  bits: 127.1 E(85289): 2.1e-29
Smith-Waterman score: 567; 53.8% identity (77.8% similar) in 171 aa overlap (3-173:6-172)

                  10        20        30        40        50       
pF1KE3    MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTV
            . ::.::: ..::..:.::: :: .: .:.:. .:. ::::::..: ..: :::.
NP_004 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE3 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVI
       : ::::::::::.:..: .:::::.::::::::... ::...  :: . :  :. :::..
NP_004 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
               70        80        90       100       110       120

       120       130       140       150       160       170       
pF1KE3 LCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGE
       : :::.::   : :   ::  ::..: : :.::::: . ::: ::    .:::..:    
NP_004 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAF----QTILTEIYRIV
              130       140       150       160           170      

       180       190       200       210       
pF1KE3 LDPERMGSGIQYGDASLRQLRQPRSAQAVAPQPCGC    
                                               
NP_004 SQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
        180       190       200       210      

>>NP_001229573 (OMIM: 179509) ras-related protein Rab-2A  (188 aa)
 initn: 563 init1: 563 opt: 563  Z-score: 645.3  bits: 126.3 E(85289): 3.3e-29
Smith-Waterman score: 563; 57.7% identity (81.2% similar) in 149 aa overlap (42-190:16-164)

              20        30        40        50        60        70 
pF1KE3 LVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFR
                                     :::::.:.... :: .::::::::::: ::
NP_001                MAYAYLFKYIIIGDTGVEFGARMITIDGKQIKLQIWDTAGQESFR
                              10        20        30        40     

              80        90       100       110       120       130 
pF1KE3 SVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREV
       :.:::::::::::::::::: :.:.: :..:: :::  .. :.:..: :::.::. .:::
NP_001 SITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREV
          50        60        70        80        90       100     

             140       150       160       170       180       190 
pF1KE3 TFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGD
          :.  ::.:. :.:.:::: :. ::::::.. :. : .::. : .: .  ..::. : 
NP_001 KKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGP
         110       120       130       140       150       160     

             200       210    
pF1KE3 ASLRQLRQPRSAQAVAPQPCGC 
                              
NP_001 QHAATNATHAGNQGGQQAGGGCC
         170       180        




213 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:03:08 2016 done: Sun Nov  6 06:03:09 2016
 Total Scan time:  6.130 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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