FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3501, 1222 aa 1>>>pF1KE3501 1222 - 1222 aa - 1222 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9014+/-0.00106; mu= 8.6614+/- 0.065 mean_var=256.7604+/-52.565, 0's: 0 Z-trim(113.1): 10 B-trim: 400 in 3/53 Lambda= 0.080041 statistics sampled from 13811 (13815) to 13811 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.424), width: 16 Scan time: 5.860 The best scores are: opt bits E(32554) CCDS6192.1 VCPIP1 gene_id:80124|Hs108|chr8 (1222) 8208 962.1 0 >>CCDS6192.1 VCPIP1 gene_id:80124|Hs108|chr8 (1222 aa) initn: 8208 init1: 8208 opt: 8208 Z-score: 5134.2 bits: 962.1 E(32554): 0 Smith-Waterman score: 8208; 99.8% identity (99.9% similar) in 1222 aa overlap (1-1222:1-1222) 10 20 30 40 50 60 pF1KE3 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARLFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARLFF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 PASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFPIEPEHVNTVGY :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: CCDS61 GLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 GKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 RPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 IKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 IKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 FMDKHGIHPSLVADVHRYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHV ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: CCDS61 FMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 PPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 PPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNW 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 CHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 CHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 RVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 RVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNP 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 DDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 DDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNI 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 TEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRIT 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 TNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 QHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 QHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLA 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 TLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLE 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 LCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLH 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 NVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 NVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNSE 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQRK 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 TEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 TEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSVE 1150 1160 1170 1180 1190 1200 1210 1220 pF1KE3 ELEEMDSQDAEMTNTTEPMDHS :::::::::::::::::::::: CCDS61 ELEEMDSQDAEMTNTTEPMDHS 1210 1220 1222 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:15:49 2016 done: Sun Nov 6 06:15:50 2016 Total Scan time: 5.860 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]