FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9611, 300 aa 1>>>pF1KE9611 300 - 300 aa - 300 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1984+/-0.000905; mu= 11.0727+/- 0.054 mean_var=79.4521+/-15.966, 0's: 0 Z-trim(106.5): 8 B-trim: 0 in 0/50 Lambda= 0.143887 statistics sampled from 9004 (9008) to 9004 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.277), width: 16 Scan time: 1.680 The best scores are: opt bits E(32554) CCDS1714.1 CENPO gene_id:79172|Hs108|chr2 ( 300) 1956 415.5 2.4e-116 CCDS56113.1 CENPO gene_id:79172|Hs108|chr2 ( 294) 1851 393.7 8.5e-110 >>CCDS1714.1 CENPO gene_id:79172|Hs108|chr2 (300 aa) initn: 1956 init1: 1956 opt: 1956 Z-score: 2202.3 bits: 415.5 E(32554): 2.4e-116 Smith-Waterman score: 1956; 99.7% identity (100.0% similar) in 300 aa overlap (1-300:1-300) 10 20 30 40 50 60 pF1KE9 MEQANPLRPDGESKGGVLAHLERLETQVSRSRKRSEELQSVQAQEGALGTKIHKLRRLRD :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: CCDS17 MEQANPLRPDGESKGGVLAHLERLETQVSRSRKQSEELQSVQAQEGALGTKIHKLRRLRD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 ELRAVVRHRRASVKACIANVEPNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 ELRAVVRHRRASVKACIANVEPNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 GVCVCISTAFEGNLLDSYFVDLVIQKPLRIHHHSVPVFIPLEEIAAKYLQTNIQHFLFSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 GVCVCISTAFEGNLLDSYFVDLVIQKPLRIHHHSVPVFIPLEEIAAKYLQTNIQHFLFSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 CEYLNAYSGRKYQADRLQSDFAALLTGPLQRNPLCNLLSFTYKLDPGGQSFPFCARLLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 CEYLNAYSGRKYQADRLQSDFAALLTGPLQRNPLCNLLSFTYKLDPGGQSFPFCARLLYK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 DLTATLPTDVTVTCQGVEVLSTSWEEQRASHETLFCTKPLHQVFASFTRKGEKLDMSLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 DLTATLPTDVTVTCQGVEVLSTSWEEQRASHETLFCTKPLHQVFASFTRKGEKLDMSLVS 250 260 270 280 290 300 >>CCDS56113.1 CENPO gene_id:79172|Hs108|chr2 (294 aa) initn: 1851 init1: 1851 opt: 1851 Z-score: 2084.7 bits: 393.7 E(32554): 8.5e-110 Smith-Waterman score: 1851; 99.6% identity (100.0% similar) in 285 aa overlap (16-300:10-294) 10 20 30 40 50 60 pF1KE9 MEQANPLRPDGESKGGVLAHLERLETQVSRSRKRSEELQSVQAQEGALGTKIHKLRRLRD ::::::::::::::::::.:::::::::::::::::::::::::: CCDS56 MAGILASGLGVLAHLERLETQVSRSRKQSEELQSVQAQEGALGTKIHKLRRLRD 10 20 30 40 50 70 80 90 100 110 120 pF1KE9 ELRAVVRHRRASVKACIANVEPNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ELRAVVRHRRASVKACIANVEPNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSR 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE9 GVCVCISTAFEGNLLDSYFVDLVIQKPLRIHHHSVPVFIPLEEIAAKYLQTNIQHFLFSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GVCVCISTAFEGNLLDSYFVDLVIQKPLRIHHHSVPVFIPLEEIAAKYLQTNIQHFLFSL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE9 CEYLNAYSGRKYQADRLQSDFAALLTGPLQRNPLCNLLSFTYKLDPGGQSFPFCARLLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 CEYLNAYSGRKYQADRLQSDFAALLTGPLQRNPLCNLLSFTYKLDPGGQSFPFCARLLYK 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE9 DLTATLPTDVTVTCQGVEVLSTSWEEQRASHETLFCTKPLHQVFASFTRKGEKLDMSLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DLTATLPTDVTVTCQGVEVLSTSWEEQRASHETLFCTKPLHQVFASFTRKGEKLDMSLVS 240 250 260 270 280 290 300 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:26:35 2016 done: Sun Nov 6 06:26:35 2016 Total Scan time: 1.680 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]