FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9672, 1498 aa 1>>>pF1KE9672 1498 - 1498 aa - 1498 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6426+/-0.000982; mu= 18.0195+/- 0.060 mean_var=103.3789+/-20.184, 0's: 0 Z-trim(107.7): 26 B-trim: 6 in 1/48 Lambda= 0.126142 statistics sampled from 9701 (9712) to 9701 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.298), width: 16 Scan time: 5.160 The best scores are: opt bits E(32554) CCDS31723.1 NCAPD3 gene_id:23310|Hs108|chr11 (1498) 9857 1805.4 0 >>CCDS31723.1 NCAPD3 gene_id:23310|Hs108|chr11 (1498 aa) initn: 9857 init1: 9857 opt: 9857 Z-score: 9688.5 bits: 1805.4 E(32554): 0 Smith-Waterman score: 9857; 100.0% identity (100.0% similar) in 1498 aa overlap (1-1498:1-1498) 10 20 30 40 50 60 pF1KE9 MVALRGLGSGLQPWCPLDLRLEWVDTVWELDFTETEPLDPSIEAEIIETGLAAFTKLYES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MVALRGLGSGLQPWCPLDLRLEWVDTVWELDFTETEPLDPSIEAEIIETGLAAFTKLYES 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 LLPFATGEHGSMESIWTFFIENNVSHSTLVALFYHFVQIVHKKNVSVQYREYGLHAAGLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LLPFATGEHGSMESIWTFFIENNVSHSTLVALFYHFVQIVHKKNVSVQYREYGLHAAGLY 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 FLLLEVPGSVANQVFHPVMFDKCIQTLKKSWPQESNLNRKRKKEQPKSSQANPGRHRKRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FLLLEVPGSVANQVFHPVMFDKCIQTLKKSWPQESNLNRKRKKEQPKSSQANPGRHRKRG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 KPPRREDIEMDEIIEEQEDENICFSARDLSQIRNAIFHLLKNFLRLLPKFSLKEKPQCVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KPPRREDIEMDEIIEEQEDENICFSARDLSQIRNAIFHLLKNFLRLLPKFSLKEKPQCVQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 NCIEVFVSLTNFEPVLHECHVTQARALNQAKYIPELAYYGLYLLCSPIHGEGDKVISCVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NCIEVFVSLTNFEPVLHECHVTQARALNQAKYIPELAYYGLYLLCSPIHGEGDKVISCVF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 HQMLSVILMLEVGEGSHRAPLAVTSQVINCRNQAVQFISALVDELKESIFPVVRILLQHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 HQMLSVILMLEVGEGSHRAPLAVTSQVINCRNQAVQFISALVDELKESIFPVVRILLQHI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 CAKVVDKSEYRTFAAQSLVQLLSKLPCGEYAMFIAWLYKYSRSSKIPHRVFTLDVVLALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CAKVVDKSEYRTFAAQSLVQLLSKLPCGEYAMFIAWLYKYSRSSKIPHRVFTLDVVLALL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 ELPEREVDNTLSLEHQKFLKHKFLVQEIMFDRCLDKAPTVRSKALSSFAHCLELTVTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ELPEREVDNTLSLEHQKFLKHKFLVQEIMFDRCLDKAPTVRSKALSSFAHCLELTVTSAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 ESILELLINSPTFSVIESHPGTLLRNSSAFSYQRQTSNRSEPSGEINIDSSGETVGSGER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ESILELLINSPTFSVIESHPGTLLRNSSAFSYQRQTSNRSEPSGEINIDSSGETVGSGER 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE9 CVMAMLRRRIRDEKTNVRKSALQVLVSILKHCDVSGMKEDLWILQDQCRDPAVSVRKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 CVMAMLRRRIRDEKTNVRKSALQVLVSILKHCDVSGMKEDLWILQDQCRDPAVSVRKQAL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE9 QSLTELLMAQPRCVQIQKAWLRGVVPVVMDCESTVQEKALEFLDQLLLQNIRHHSHFHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 QSLTELLMAQPRCVQIQKAWLRGVVPVVMDCESTVQEKALEFLDQLLLQNIRHHSHFHSG 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE9 DDSQVLAWALLTLLTTESQELSRYLNKAFHIWSKKEKFSPTFINNVISHTGTEHSAPAWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DDSQVLAWALLTLLTTESQELSRYLNKAFHIWSKKEKFSPTFINNVISHTGTEHSAPAWM 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE9 LLSKIAGSSPRLDYSRIIQSWEKISSQQNPNSNTLGHILCVIGHIAKHLPKSTRDKVTDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LLSKIAGSSPRLDYSRIIQSWEKISSQQNPNSNTLGHILCVIGHIAKHLPKSTRDKVTDA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE9 VKCKLNGFQWSLEVISSAVDALQRLCRASAETPAEEQELLTQVCGDVLSTCEHRLSNIVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VKCKLNGFQWSLEVISSAVDALQRLCRASAETPAEEQELLTQVCGDVLSTCEHRLSNIVL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE9 KENGTGNMDEDLLVKYIFTLGDIAQLCPARVEKRIFLLIQSVLASSADADHSPSSQGSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 KENGTGNMDEDLLVKYIFTLGDIAQLCPARVEKRIFLLIQSVLASSADADHSPSSQGSSE 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE9 APASQPPPQVRGSVMPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 APASQPPPQVRGSVMPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNN 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE9 VIIVMCDLCIRYTIMVDKYIPNISMCLKDSDPFIRKQTLILLTNLLQEEFVKWKGSLFFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VIIVMCDLCIRYTIMVDKYIPNISMCLKDSDPFIRKQTLILLTNLLQEEFVKWKGSLFFR 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE9 FVSTLIDSHPDIASFGEFCLAHLLLKRNPVMFFQHFIECIFHFNNYEKHEKYNKFPQSER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FVSTLIDSHPDIASFGEFCLAHLLLKRNPVMFFQHFIECIFHFNNYEKHEKYNKFPQSER 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE9 EKRLFSLKGKSNKERRMKIYKFLLEHFTDEQRFNITSKICLSILACFADGILPLDLDASE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EKRLFSLKGKSNKERRMKIYKFLLEHFTDEQRFNITSKICLSILACFADGILPLDLDASE 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE9 LLSDTFEVLSSKEIKLLAMRSKPDKDLLMEEDDMALANVVMQEAQKKLISQVQKRNFIEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LLSDTFEVLSSKEIKLLAMRSKPDKDLLMEEDDMALANVVMQEAQKKLISQVQKRNFIEN 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE9 IIPIIISLKTVLEKNKIPALRELMHYLREVMQDYRDELKDFFAVDKQLASELEYDMKKYQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 IIPIIISLKTVLEKNKIPALRELMHYLREVMQDYRDELKDFFAVDKQLASELEYDMKKYQ 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE9 EQLVQEQELAKHADVAGTAGGAEVAPVAQVALCLETVPVPAGQENPAMSPAVSQPCTPRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EQLVQEQELAKHADVAGTAGGAEVAPVAQVALCLETVPVPAGQENPAMSPAVSQPCTPRA 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE9 SAGHVAVSSPTPETGPLQRLLPKARPMSLSTIAILNSVKKAVESKSRHRSRSLGVLPFTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SAGHVAVSSPTPETGPLQRLLPKARPMSLSTIAILNSVKKAVESKSRHRSRSLGVLPFTL 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE9 NSGSPEKTCSQVSSYSLEQESNGEIEHVTKRAISTPEKSISDVTFGAGVSYIGTPRTPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 NSGSPEKTCSQVSSYSLEQESNGEIEHVTKRAISTPEKSISDVTFGAGVSYIGTPRTPSS 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 pF1KE9 AKEKIEGRSQGNDILCLSLPDKPPPQPQQWNVRSPARNKDTPACSRRSLRKTPLKTAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AKEKIEGRSQGNDILCLSLPDKPPPQPQQWNVRSPARNKDTPACSRRSLRKTPLKTAN 1450 1460 1470 1480 1490 1498 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:43:25 2016 done: Sun Nov 6 06:43:26 2016 Total Scan time: 5.160 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]