FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3751, 1469 aa 1>>>pF1KE3751 1469 - 1469 aa - 1469 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.1309+/-0.000435; mu= -12.0561+/- 0.027 mean_var=513.4586+/-105.799, 0's: 0 Z-trim(123.2): 103 B-trim: 0 in 0/60 Lambda= 0.056601 statistics sampled from 42551 (42691) to 42551 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.78), E-opt: 0.2 (0.501), width: 16 Scan time: 21.820 The best scores are: opt bits E(85289) XP_006717304 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0 XP_005266153 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0 XP_006717305 (OMIM: 602777) PREDICTED: snRNA-activ (1469) 9852 820.5 0 NP_003077 (OMIM: 602777) snRNA-activating protein (1469) 9852 820.5 0 XP_006717307 (OMIM: 602777) PREDICTED: snRNA-activ ( 873) 5160 437.2 2.7e-121 XP_016870547 (OMIM: 602777) PREDICTED: snRNA-activ (1441) 5109 433.2 7e-120 >>XP_006717304 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa) initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0 Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469) 10 20 30 40 50 60 pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS 1390 1400 1410 1420 1430 1440 1450 1460 pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::::::::: XP_006 CLDTSNDPDDLDVLRTRHARHTRKRRRLV 1450 1460 >>XP_005266153 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa) initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0 Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469) 10 20 30 40 50 60 pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS 1390 1400 1410 1420 1430 1440 1450 1460 pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::::::::: XP_005 CLDTSNDPDDLDVLRTRHARHTRKRRRLV 1450 1460 >>XP_006717305 (OMIM: 602777) PREDICTED: snRNA-activatin (1469 aa) initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0 Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469) 10 20 30 40 50 60 pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS 1390 1400 1410 1420 1430 1440 1450 1460 pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::::::::: XP_006 CLDTSNDPDDLDVLRTRHARHTRKRRRLV 1450 1460 >>NP_003077 (OMIM: 602777) snRNA-activating protein comp (1469 aa) initn: 9852 init1: 9852 opt: 9852 Z-score: 4366.3 bits: 820.5 E(85289): 0 Smith-Waterman score: 9852; 100.0% identity (100.0% similar) in 1469 aa overlap (1-1469:1-1469) 10 20 30 40 50 60 pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS 1390 1400 1410 1420 1430 1440 1450 1460 pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::::::::: NP_003 CLDTSNDPDDLDVLRTRHARHTRKRRRLV 1450 1460 >>XP_006717307 (OMIM: 602777) PREDICTED: snRNA-activatin (873 aa) initn: 5159 init1: 5159 opt: 5160 Z-score: 2298.7 bits: 437.2 E(85289): 2.7e-121 Smith-Waterman score: 5170; 88.7% identity (91.5% similar) in 893 aa overlap (584-1469:3-873) 560 570 580 590 600 610 pF1KE3 EGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSPPKGSSASQGGSKE : : : :.: : :. . : : .. XP_006 MERRGRG--LAGRPRCLPQPSQGVQCQPGRQQ 10 20 30 620 630 640 650 660 pF1KE3 AS---TTAAAPGEETS--PVQVPARAHGPVPRSAQASHSADTRPAGAEKQALEGGRRLLT .: . .. :.:.. : : : : :. . . :.: ...: :: . XP_006 GSFHHSRGSWRGDESGAGPCQGPR----PCPEVCPGLPLSRHSPGG-RREAGPGGWE--- 40 50 60 70 80 670 680 690 700 710 720 pF1KE3 VPVETVLRVLRANTAARSCTQKEQLRQPPLPTSS--PGVSSGDSVARSHVQWLRHRATQS .: .: .. . : : ::::::::::::::::::::::: XP_006 ------------ASADSACGDRAEGAQGQHGCSELHTGVSSGDSVARSHVQWLRHRATQS 90 100 110 120 130 730 740 750 760 770 780 pF1KE3 GQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQLQQARLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQLQQARLA 140 150 160 170 180 190 790 800 810 820 830 840 pF1KE3 STPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQSTPGHLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 STPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQSTPGHLF 200 210 220 230 240 250 850 860 870 880 890 900 pF1KE3 PNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEKRLQEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEKRLQEAR 260 270 280 290 300 310 910 920 930 940 950 960 pF1KE3 AREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAAAKPGTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAAAKPGTS 320 330 340 350 360 370 970 980 990 1000 1010 1020 pF1KE3 GSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPESGLGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPESGLGQS 380 390 400 410 420 430 1030 1040 1050 1060 1070 1080 pF1KE3 QAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVLTAQGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVLTAQGLL 440 450 460 470 480 490 1090 1100 1110 1120 1130 1140 pF1KE3 PVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANMNREPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANMNREPEP 500 510 520 530 540 550 1150 1160 1170 1180 1190 1200 pF1KE3 SCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEPPWSGRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEPPWSGRL 560 570 580 590 600 610 1210 1220 1230 1240 1250 1260 pF1KE3 PAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLPQPGPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLPQPGPEK 620 630 640 650 660 670 1270 1280 1290 1300 1310 1320 pF1KE3 GALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLHKKALEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLHKKALEH 680 690 700 710 720 730 1330 1340 1350 1360 1370 1380 pF1KE3 KATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLATLAPQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLATLAPQGV 740 750 760 770 780 790 1390 1400 1410 1420 1430 1440 pF1KE3 RTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASSCLDTSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASSCLDTSN 800 810 820 830 840 850 1450 1460 pF1KE3 DPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::: XP_006 DPDDLDVLRTRHARHTRKRRRLV 860 870 >>XP_016870547 (OMIM: 602777) PREDICTED: snRNA-activatin (1441 aa) initn: 5097 init1: 5097 opt: 5109 Z-score: 2273.2 bits: 433.2 E(85289): 7e-120 Smith-Waterman score: 9600; 98.1% identity (98.1% similar) in 1469 aa overlap (1-1469:1-1441) 10 20 30 40 50 60 pF1KE3 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MDVDAEREKITQEIKELERILDPGSSGSHVEISESSLESDSEADSLPSEDLDPADPPISE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EERWGEASNDEDDPKDKTLPEDPETCLQLNMVYQEVIQEKLAEANLLLAQNREQQEELMR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DLAGSKGTKVKDGKSLPPSTYMGHFMKPYFKDKVTGVGPPANEDTREKAAQGIKAFEELL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VTKWKNWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSKVSSELERQALEKQGREAEK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EIQDINQLPEEALLGNRLDSHDWEKISNINFEGSRSAEEIRKFWQNSEHPSINKQEWSRE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EEERLQAIAAAHGHLEWQKIAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SELPHRSGSQCLSKWKIMMGKKQGLRRRRRRARHSVRWSSTSSSGSSSGSSGGSSSSSSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SSEEDEPEQAQAGEGDRALLSPQYMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PKGSSASQGGSKEASTTAAAPGEETSPVQVPARAHGPVPRSAQASHSADTRPAGAEKQAL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 EGGRRLLTVPVETVLRVLRANTAARSCTQKEQLRQPPLPTSSPGVSSGDSVARSHVQWLR ::::::::::::::::::::::::::::: ::: XP_016 EGGRRLLTVPVETVLRVLRANTAARSCTQ----------------------------WLR 670 680 690 730 740 750 760 770 780 pF1KE3 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HRATQSGQRRWRHALHRRLLNRRLLLAVTPWVGDVVVPCTQASQRPAVVQTQADGLREQL 700 710 720 730 740 750 790 800 810 820 830 840 pF1KE3 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QQARLASTPVFTLFTQLFHIDTAGCLEVVRERKALPPRLPQAGARDPPVHLLQASSSAQS 760 770 780 790 800 810 850 860 870 880 890 900 pF1KE3 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TPGHLFPNVPAQEASKSASHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELLQEK 820 830 840 850 860 870 910 920 930 940 950 960 pF1KE3 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RLQEARAREATRGPVVLPSQLLVSSSVILQPPLPHTPHGRPAPGPTVLNVPLSGPGAPAA 880 890 900 910 920 930 970 980 990 1000 1010 1020 pF1KE3 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AKPGTSGSWQEAGTSAKDKRLSTMQALPLAPVFSEAEGTAPAASQAPALGPGQISVSCPE 940 950 960 970 980 990 1030 1040 1050 1060 1070 1080 pF1KE3 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SGLGQSQAPAASRKQGLPEAPPFLPAAPSPTPLPVQPLSLTHIGGPHVATSVPLPVTWVL 1000 1010 1020 1030 1040 1050 1090 1100 1110 1120 1130 1140 pF1KE3 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSWQPPANM 1060 1070 1080 1090 1100 1110 1150 1160 1170 1180 1190 1200 pF1KE3 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NREPEPSCRTDTPAPPTHALSQSPAEADGSVAFVPGEAQVAREIPEPRTSSHADPPEAEP 1120 1130 1140 1150 1160 1170 1210 1220 1230 1240 1250 1260 pF1KE3 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PWSGRLPAFGGVIPATEPRGTPGSPSGTQEPRGPLGLEKLPLRQPGPEKGALDLEKPPLP 1180 1190 1200 1210 1220 1230 1270 1280 1290 1300 1310 1320 pF1KE3 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QPGPEKGALDLGLLSQEGEAATQQWLGGQRGVRVPLLGSRLPYQPPALCSLRALSGLLLH 1240 1250 1260 1270 1280 1290 1330 1340 1350 1360 1370 1380 pF1KE3 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KKALEHKATSLVVGGEAERPAGALQASLGLVRGQLQDNPAYLLLRARFLAAFTLPALLAT 1300 1310 1320 1330 1340 1350 1390 1400 1410 1420 1430 1440 pF1KE3 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LAPQGVRTTLSVPSRVGSESEDEDLLSELELADRDGQPGCTTATCPIQGAPDSGKCSASS 1360 1370 1380 1390 1400 1410 1450 1460 pF1KE3 CLDTSNDPDDLDVLRTRHARHTRKRRRLV ::::::::::::::::::::::::::::: XP_016 CLDTSNDPDDLDVLRTRHARHTRKRRRLV 1420 1430 1440 1469 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:40:58 2016 done: Sun Nov 6 07:41:01 2016 Total Scan time: 21.820 Total Display time: 0.570 Function used was FASTA [36.3.4 Apr, 2011]