FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3752, 158 aa 1>>>pF1KE3752 158 - 158 aa - 158 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8917+/-0.000271; mu= 15.5739+/- 0.017 mean_var=72.4122+/-14.756, 0's: 0 Z-trim(119.9): 121 B-trim: 22 in 1/56 Lambda= 0.150719 statistics sampled from 34380 (34506) to 34380 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.405), width: 16 Scan time: 5.590 The best scores are: opt bits E(85289) NP_919237 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66 NP_003336 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66 XP_016879129 (OMIM: 601661) PREDICTED: SUMO-conjug ( 158) 1113 250.0 1.2e-66 NP_919236 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66 NP_919235 (OMIM: 601661) SUMO-conjugating enzyme U ( 158) 1113 250.0 1.2e-66 XP_011520946 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57 XP_005255598 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57 XP_011520947 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57 XP_005255597 (OMIM: 601661) PREDICTED: SUMO-conjug ( 184) 972 219.4 2.3e-57 NP_003328 (OMIM: 179095) ubiquitin-conjugating enz ( 152) 422 99.7 2e-21 NP_003327 (OMIM: 300860,312180) ubiquitin-conjugat ( 152) 418 98.9 3.6e-21 NP_001269090 (OMIM: 300860,312180) ubiquitin-conju ( 119) 368 87.9 5.6e-18 NP_003330 (OMIM: 602962) ubiquitin-conjugating enz ( 147) 349 83.8 1.1e-16 NP_871621 (OMIM: 602963) ubiquitin-conjugating enz ( 148) 349 83.8 1.2e-16 NP_871616 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_003331 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_871615 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_871618 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_871617 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_871619 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_871620 (OMIM: 602963) ubiquitin-conjugating enz ( 147) 347 83.4 1.6e-16 NP_003329 (OMIM: 602961) ubiquitin-conjugating enz ( 147) 339 81.7 5.2e-16 NP_871622 (OMIM: 602963) ubiquitin-conjugating enz ( 149) 333 80.4 1.3e-15 XP_016865309 (OMIM: 602962) PREDICTED: ubiquitin-c ( 173) 332 80.2 1.7e-15 NP_862821 (OMIM: 602962) ubiquitin-conjugating enz ( 118) 328 79.2 2.3e-15 XP_016864073 (OMIM: 602963) PREDICTED: ubiquitin-c ( 118) 325 78.5 3.6e-15 NP_001287724 (OMIM: 602963) ubiquitin-conjugating ( 118) 325 78.5 3.6e-15 NP_689866 (OMIM: 602163) ubiquitin-conjugating enz ( 201) 317 77.0 1.8e-14 XP_005265489 (OMIM: 602163) PREDICTED: ubiquitin-c ( 201) 317 77.0 1.8e-14 NP_001265483 (OMIM: 604151) ubiquitin-conjugating ( 207) 316 76.8 2.1e-14 NP_006348 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 316 76.8 2.1e-14 NP_001265484 (OMIM: 604151) ubiquitin-conjugating ( 207) 316 76.8 2.1e-14 XP_005246301 (OMIM: 604151) PREDICTED: ubiquitin-c ( 207) 316 76.8 2.1e-14 NP_872619 (OMIM: 604151) ubiquitin-conjugating enz ( 207) 316 76.8 2.1e-14 NP_001189405 (OMIM: 602916) ubiquitin-conjugating ( 160) 312 75.8 3.2e-14 NP_872607 (OMIM: 602916) ubiquitin-conjugating enz ( 176) 310 75.4 4.7e-14 NP_003332 (OMIM: 602916) ubiquitin-conjugating enz ( 193) 310 75.5 5e-14 NP_055316 (OMIM: 610309) ubiquitin-conjugating enz ( 222) 310 75.5 5.6e-14 NP_054895 (OMIM: 610538,616435) ubiquitin-conjugat ( 197) 298 72.9 3.1e-13 NP_003339 (OMIM: 603679) ubiquitin-conjugating enz ( 152) 295 72.1 4e-13 XP_016872098 (OMIM: 602961) PREDICTED: ubiquitin-c ( 110) 290 70.9 6.8e-13 NP_001297255 (OMIM: 610538,616435) ubiquitin-conju ( 167) 291 71.3 7.9e-13 NP_001191809 (OMIM: 602961) ubiquitin-conjugating ( 109) 285 69.8 1.4e-12 NP_008950 (OMIM: 605574) ubiquitin-conjugating enz ( 179) 274 67.6 1.1e-11 NP_003960 (OMIM: 603173) NEDD8-conjugating enzyme ( 183) 272 67.2 1.5e-11 NP_861517 (OMIM: 605574) ubiquitin-conjugating enz ( 140) 267 66.0 2.6e-11 NP_003334 (OMIM: 603124) ubiquitin-conjugating enz ( 165) 265 65.6 3.9e-11 NP_005330 (OMIM: 602846) ubiquitin-conjugating enz ( 200) 264 65.5 5.3e-11 XP_005265490 (OMIM: 602163) PREDICTED: ubiquitin-c ( 189) 261 64.8 8e-11 NP_003338 (OMIM: 603721) ubiquitin-conjugating enz ( 154) 256 63.6 1.5e-10 >>NP_919237 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>NP_003336 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: NP_003 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>XP_016879129 (OMIM: 601661) PREDICTED: SUMO-conjugatin (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: XP_016 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>NP_919236 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>NP_919235 (OMIM: 601661) SUMO-conjugating enzyme UBC9 (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1317.6 bits: 250.0 E(85289): 1.2e-66 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_919 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: NP_919 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>XP_011520946 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa) initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57 Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS ::::::::::::::::: XP_011 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE 130 140 150 160 170 180 >>XP_005255598 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa) initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57 Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS ::::::::::::::::: XP_005 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE 130 140 150 160 170 180 >>XP_011520947 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa) initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57 Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS ::::::::::::::::: XP_011 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE 130 140 150 160 170 180 >>XP_005255597 (OMIM: 601661) PREDICTED: SUMO-conjugatin (184 aa) initn: 972 init1: 972 opt: 972 Z-score: 1151.0 bits: 219.4 E(85289): 2.3e-57 Smith-Waterman score: 972; 100.0% identity (100.0% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS ::::::::::::::::: XP_005 NEPNIQDPAQAEAYTIYWLVAALAPLVAAPPRPSQGRLAGREWRTQAHPTDSQGPRLCGE 130 140 150 160 170 180 >>NP_003328 (OMIM: 179095) ubiquitin-conjugating enzyme (152 aa) initn: 404 init1: 239 opt: 422 Z-score: 505.8 bits: 99.7 E(85289): 2e-21 Smith-Waterman score: 422; 42.7% identity (70.7% similar) in 150 aa overlap (1-150:1-143) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :: : :: .. : ..: : : ..:..: :.:.:. .: : .:::.: : ::: NP_003 MSTPARRRLMRDFKRLQEDPPVGVSGAPSEN-----NIMQWNAVIFGPEGTPFEDGTFKL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . :...::..:: .: .:::::: .:..::.::.. : :. ...:: .:: :: NP_003 VIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNR--WSPTYDVSSILTSIQSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .::: ..::...: .: .:. :::::: : NP_003 DEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS 120 130 140 150 158 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:53:04 2016 done: Sun Nov 6 07:53:05 2016 Total Scan time: 5.590 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]