FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3752, 158 aa 1>>>pF1KE3752 158 - 158 aa - 158 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2300+/-0.000592; mu= 13.3232+/- 0.036 mean_var=69.7396+/-13.887, 0's: 0 Z-trim(113.0): 66 B-trim: 0 in 0/51 Lambda= 0.153580 statistics sampled from 13608 (13675) to 13608 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.42), width: 16 Scan time: 1.820 The best scores are: opt bits E(32554) CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 1113 254.5 2e-68 CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 422 101.4 2.4e-22 CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 418 100.5 4.4e-22 CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 368 89.3 7.9e-19 CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 349 85.2 1.7e-17 CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 349 85.2 1.7e-17 CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 349 85.2 1.7e-17 CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 347 84.7 2.3e-17 CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 339 83.0 8e-17 CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 333 81.6 2e-16 CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 328 80.5 3.6e-16 CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 325 79.8 5.8e-16 CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 317 78.2 3e-15 CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 316 78.0 3.6e-15 CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 312 77.0 5.4e-15 CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 310 76.6 8e-15 CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 310 76.6 8.6e-15 CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 310 76.7 9.6e-15 CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 298 74.0 5.5e-14 CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 295 73.2 7.1e-14 CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 285 70.9 2.5e-13 CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 274 68.6 2e-12 CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 272 68.2 2.8e-12 CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 267 67.0 4.9e-12 CCDS13714.1 UBE2G2 gene_id:7327|Hs108|chr21 ( 165) 265 66.6 7.6e-12 CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 264 66.4 1e-11 CCDS627.1 UBE2U gene_id:148581|Hs108|chr1 ( 226) 264 66.5 1.1e-11 CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 256 64.6 2.9e-11 CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 255 64.5 4.3e-11 >>CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 (158 aa) initn: 1113 init1: 1113 opt: 1113 Z-score: 1341.9 bits: 254.5 E(32554): 2e-68 Smith-Waterman score: 1113; 100.0% identity (100.0% similar) in 158 aa overlap (1-158:1-158) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL 70 80 90 100 110 120 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :::::::::::::::::::::::::::::::::::::: CCDS10 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 130 140 150 >>CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 (152 aa) initn: 404 init1: 239 opt: 422 Z-score: 514.7 bits: 101.4 E(32554): 2.4e-22 Smith-Waterman score: 422; 42.7% identity (70.7% similar) in 150 aa overlap (1-150:1-143) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :: : :: .. : ..: : : ..:..: :.:.:. .: : .:::.: : ::: CCDS41 MSTPARRRLMRDFKRLQEDPPVGVSGAPSEN-----NIMQWNAVIFGPEGTPFEDGTFKL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . :...::..:: .: .:::::: .:..::.::.. : :. ...:: .:: :: CCDS41 VIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNR--WSPTYDVSSILTSIQSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .::: ..::...: .: .:. :::::: : CCDS41 DEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS 120 130 140 150 >>CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX (152 aa) initn: 400 init1: 237 opt: 418 Z-score: 509.9 bits: 100.5 E(32554): 4.4e-22 Smith-Waterman score: 418; 42.7% identity (69.3% similar) in 150 aa overlap (1-150:1-143) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :: : :: .. : ..: : : ..:..: :.: :. .: : .:::.: : ::: CCDS14 MSTPARRRLMRDFKRLQEDPPAGVSGAPSEN-----NIMVWNAVIFGPEGTPFEDGTFKL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ..::..:: .: .:::::: .:..::.::.. : :. ...:: .:: :: CCDS14 TIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNR--WSPTYDVSSILTSIQSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .::: ..::...: .: .:. :::::: : CCDS14 DEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWRDC 120 130 140 150 >>CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX (119 aa) initn: 344 init1: 228 opt: 368 Z-score: 451.5 bits: 89.3 E(32554): 7.9e-19 Smith-Waterman score: 368; 46.4% identity (74.1% similar) in 112 aa overlap (39-150:1-110) 10 20 30 40 50 60 pF1KE3 LAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDY : :. .: : .:::.: : ::: . : ..: CCDS78 MVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 10 20 30 70 80 90 100 110 120 pF1KE3 PSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDP :..:: .: .:::::: .:..::.::.. : :. ...:: .:: ::.::: ..: CCDS78 PNKPPTVRFVSKMFHPNVYADGSICLDILQN--RWSPTYDVSSILTSIQSLLDEPNPNSP 40 50 60 70 80 130 140 150 pF1KE3 AQAEAYTIYCQNRVEYEKRVRAQAKKFAPS :...: .: .:. :::::: : CCDS78 ANSQAAQLYQENKREYEKRVSAIVEQSWRDC 90 100 110 >>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa) initn: 292 init1: 207 opt: 349 Z-score: 427.5 bits: 85.2 E(32554): 1.7e-17 Smith-Waterman score: 349; 34.6% identity (64.7% similar) in 153 aa overlap (4-156:1-146) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL .::.:. .: ..: : : :. . .:..:. .: : . .:..::.: : CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGD-----DLFHWQATIMGPNDSPYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.:....::.: :: CCDS54 TIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: : : .: .:.. .: ..:.: CCDS54 CDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYAM 120 130 140 >>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa) initn: 316 init1: 203 opt: 349 Z-score: 427.5 bits: 85.2 E(32554): 1.7e-17 Smith-Waterman score: 349; 35.3% identity (65.4% similar) in 153 aa overlap (4-156:1-146) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL .::.:. .: . .: : : :. . ....:. .: : . .:..::.: : CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGD-----DMFHWQATIMGPNDSPYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.::...::.: :: CCDS43 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: : :: .: .:.. .: ..:.: CCDS43 CDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 120 130 140 >>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa) initn: 315 init1: 203 opt: 349 Z-score: 427.4 bits: 85.2 E(32554): 1.7e-17 Smith-Waterman score: 349; 35.3% identity (65.4% similar) in 153 aa overlap (4-156:1-146) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL .::.:. .: . .: : : :. . ....:. .: : . .:..::.: : CCDS36 MALKRINKELSDLARDPPAQCSAGPVGD-----DMFHWQATIMGPNDSPYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.::...::.: :: CCDS36 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: : :: .: .:.. .: ..:.: CCDS36 CDPNPDDPLVPEIARIYKTDRDKYNRLAREWTEKYAML 120 130 140 >>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa) initn: 297 init1: 203 opt: 347 Z-score: 425.1 bits: 84.7 E(32554): 2.3e-17 Smith-Waterman score: 347; 35.3% identity (64.7% similar) in 153 aa overlap (4-156:1-146) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL .::.:. .: . .: : : :. . ....:. .: : . .:..::.: : CCDS36 MALKRINKELSDLARDPPAQCSAGPVGD-----DMFHWQATIMGPNDSPYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.::...::.: :: CCDS36 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: : :: .: .:.. : ..:.: CCDS36 CDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 120 130 140 >>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa) initn: 302 init1: 193 opt: 339 Z-score: 415.5 bits: 83.0 E(32554): 8e-17 Smith-Waterman score: 339; 33.3% identity (66.0% similar) in 153 aa overlap (4-156:1-146) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL .::.:. .: . ..: : : :. . .:..:. .: : . ..::.: : CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGD-----DLFHWQATIMGPPDSAYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.:....::.: :: CCDS72 TVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR--SQWSPALTVSKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: . :: ... .:....: ..:.: CCDS72 CDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM 120 130 140 >>CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 (149 aa) initn: 297 init1: 203 opt: 333 Z-score: 408.2 bits: 81.6 E(32554): 2e-16 Smith-Waterman score: 333; 35.8% identity (64.9% similar) in 148 aa overlap (9-156:8-148) 10 20 30 40 50 60 pF1KE3 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKL :..: . .: : : . .: : ....:. .: : . .:..::.: : CCDS36 MLSNRKCLSKELSDLARDPP----AQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFL 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 RMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELL . : ::: .::: : ..:::. .:..::.::. ..: ::.::...::.: :: CCDS36 TIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR--SQWSPALTISKVLLSICSLL 60 70 80 90 100 110 130 140 150 pF1KE3 NEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS .:: .:: : :: .: .:.. : ..:.: CCDS36 CDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM 120 130 140 158 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:53:03 2016 done: Sun Nov 6 07:53:04 2016 Total Scan time: 1.820 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]