FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA1903, 1132 aa 1>>>pF1KA1903 1132 - 1132 aa - 1132 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.3535+/-0.00122; mu= 12.6133+/- 0.074 mean_var=112.2200+/-22.281, 0's: 0 Z-trim(104.5): 28 B-trim: 114 in 2/48 Lambda= 0.121071 statistics sampled from 7928 (7940) to 7928 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.244), width: 16 Scan time: 4.160 The best scores are: opt bits E(32554) CCDS9684.1 MIS18BP1 gene_id:55320|Hs108|chr14 (1132) 7405 1305.3 0 >>CCDS9684.1 MIS18BP1 gene_id:55320|Hs108|chr14 (1132 aa) initn: 7405 init1: 7405 opt: 7405 Z-score: 6990.5 bits: 1305.3 E(32554): 0 Smith-Waterman score: 7405; 100.0% identity (100.0% similar) in 1132 aa overlap (1-1132:1-1132) 10 20 30 40 50 60 pF1KA1 MIATPLKHSRIYLPPEASSQRRNLPMDAIFFDSIPSGTLTPVKDLVKYQNSSLKLNDHKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 MIATPLKHSRIYLPPEASSQRRNLPMDAIFFDSIPSGTLTPVKDLVKYQNSSLKLNDHKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA1 NQFLKMTTFNNKNIFQSTMLTEATTSNSSLDISAIKPNKDGLKNKANYESPGKIFLRMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 NQFLKMTTFNNKNIFQSTMLTEATTSNSSLDISAIKPNKDGLKNKANYESPGKIFLRMKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA1 KVLRDKQEQPSRNSSLLEPQKSGNNETFTPNRVEKKKLQHTYLCEEKENNKSFQSDDSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 KVLRDKQEQPSRNSSLLEPQKSGNNETFTPNRVEKKKLQHTYLCEEKENNKSFQSDDSSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA1 RASVQGVPLESSNNDIFLPVKQKIQCQQEKKAPLHNLTYELPTLNQEQENFLAVEARNKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 RASVQGVPLESSNNDIFLPVKQKIQCQQEKKAPLHNLTYELPTLNQEQENFLAVEARNKT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA1 LTRAQLAKQIFHSKESIVATTKSKKDTFVLESVDSADEQFQNTNAETLSTNCIPIKNGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 LTRAQLAKQIFHSKESIVATTKSKKDTFVLESVDSADEQFQNTNAETLSTNCIPIKNGSL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA1 LMVSDSERTTEGTSQQKVKEGNGKTVPGETGLPGSMKDTCKIVLATPRLHITIPRRSKRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 LMVSDSERTTEGTSQQKVKEGNGKTVPGETGLPGSMKDTCKIVLATPRLHITIPRRSKRN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA1 ISKLSPPRIFQTVTNGLKKNQVVQLQEWMIKSINNNTAICVEGKLIDVTNIYWHSNVIIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 ISKLSPPRIFQTVTNGLKKNQVVQLQEWMIKSINNNTAICVEGKLIDVTNIYWHSNVIIE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA1 RIEHNKLRTISGNVYILKGMIDQISMKEAGYPNYLIRKFMFGFPENWKEHIDNFLEQLRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 RIEHNKLRTISGNVYILKGMIDQISMKEAGYPNYLIRKFMFGFPENWKEHIDNFLEQLRA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA1 GEKNREKTKQKQKTGRSVRDIRKSMKNDARENQTDTAQRATTTYDFDCDNLELKSNKHSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 GEKNREKTKQKQKTGRSVRDIRKSMKNDARENQTDTAQRATTTYDFDCDNLELKSNKHSE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA1 SPGATELNMCHSNCQNKPTLRFPDDQVNNTIQNGGGDDLSNQELIGKKEYKMSSKKLKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 SPGATELNMCHSNCQNKPTLRFPDDQVNNTIQNGGGDDLSNQELIGKKEYKMSSKKLKIG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA1 ERTNERIIKSQKQETTEELDVSIDILTSREQFFSDEERKYMAINQKKAYILVTPLKSRKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 ERTNERIIKSQKQETTEELDVSIDILTSREQFFSDEERKYMAINQKKAYILVTPLKSRKV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA1 IEQRCMRYNLSAGTIKAVTDFVIPECQKKSPISKSMGTLENTFEGHKSKNKEDCDERDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 IEQRCMRYNLSAGTIKAVTDFVIPECQKKSPISKSMGTLENTFEGHKSKNKEDCDERDLL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA1 TVNRKIKISNLEKEQMLTSDFKKNTRLLPKLKKIENQVAMSFYKHQSSPDLSSEESETEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 TVNRKIKISNLEKEQMLTSDFKKNTRLLPKLKKIENQVAMSFYKHQSSPDLSSEESETEK 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA1 EIKRKAEVKKTKAGNTKEAVVHLRKSTRNTSNIPVILEPETEESENEFYIKQKKARPSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 EIKRKAEVKKTKAGNTKEAVVHLRKSTRNTSNIPVILEPETEESENEFYIKQKKARPSVK 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA1 ETLQKSGVRKEFPITEAVGSDKTNRHPLECLPGLIQDKEWNEKELQKLHCAFASLPKHKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 ETLQKSGVRKEFPITEAVGSDKTNRHPLECLPGLIQDKEWNEKELQKLHCAFASLPKHKP 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA1 GFWSEVAAAVGSRSPEECQRKYMENPRGKGSQKHVTKKKPANSKGQNGKRGDADQKQTIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 GFWSEVAAAVGSRSPEECQRKYMENPRGKGSQKHVTKKKPANSKGQNGKRGDADQKQTIK 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA1 ITAKVGTLKRKQQMREFLEQLPKDDHDDFFSTTPLQHQRILLPSFQDSEDDDDILPNMDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 ITAKVGTLKRKQQMREFLEQLPKDDHDDFFSTTPLQHQRILLPSFQDSEDDDDILPNMDK 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA1 NPTTPSSVIFPLVKTPQCQHVSPGMLGSINRNDCDKYVFRMQKYHKSNGGIVWGNIKKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 NPTTPSSVIFPLVKTPQCQHVSPGMLGSINRNDCDKYVFRMQKYHKSNGGIVWGNIKKKL 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 pF1KA1 VETDFSTPTPRRKTPFNTDLGENSGIGKLFTNAVESLDEEEKDYYFSNSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 VETDFSTPTPRRKTPFNTDLGENSGIGKLFTNAVESLDEEEKDYYFSNSDSA 1090 1100 1110 1120 1130 1132 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:27:25 2016 done: Sun Nov 6 20:27:26 2016 Total Scan time: 4.160 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]