FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2071, 730 aa 1>>>pF1KE2071 730 - 730 aa - 730 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4286+/-0.000391; mu= -3.9843+/- 0.024 mean_var=280.2164+/-57.971, 0's: 0 Z-trim(120.4): 35 B-trim: 0 in 0/57 Lambda= 0.076617 statistics sampled from 35663 (35706) to 35663 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.419), width: 16 Scan time: 12.250 The best scores are: opt bits E(85289) NP_057532 (OMIM: 610617) denticleless protein homo ( 730) 4971 563.4 1.1e-159 NP_001273159 (OMIM: 610617) denticleless protein h ( 688) 4561 518.1 4.7e-146 XP_011507916 (OMIM: 610617) PREDICTED: denticleles ( 668) 4521 513.7 9.8e-145 NP_001273158 (OMIM: 610617) denticleless protein h ( 459) 3110 357.6 6.5e-98 >>NP_057532 (OMIM: 610617) denticleless protein homolog (730 aa) initn: 4971 init1: 4971 opt: 4971 Z-score: 2987.7 bits: 563.4 E(85289): 1.1e-159 Smith-Waterman score: 4971; 100.0% identity (100.0% similar) in 730 aa overlap (1-730:1-730) 10 20 30 40 50 60 pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED 670 680 690 700 710 720 730 pF1KE2 FCGPEHSTEL :::::::::: NP_057 FCGPEHSTEL 730 >>NP_001273159 (OMIM: 610617) denticleless protein homol (688 aa) initn: 4555 init1: 4555 opt: 4561 Z-score: 2743.1 bits: 518.1 E(85289): 4.7e-146 Smith-Waterman score: 4570; 94.2% identity (94.2% similar) in 730 aa overlap (1-730:1-688) 10 20 30 40 50 60 pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA ::::::::::::::::: : NP_001 MLFNSVLRQPQLGVLRN------------------------------------------A 10 70 80 90 100 110 120 pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ 20 30 40 50 60 70 130 140 150 160 170 180 pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI 380 390 400 410 420 430 490 500 510 520 530 540 pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ 440 450 460 470 480 490 550 560 570 580 590 600 pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK 500 510 520 530 540 550 610 620 630 640 650 660 pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK 560 570 580 590 600 610 670 680 690 700 710 720 pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED 620 630 640 650 660 670 730 pF1KE2 FCGPEHSTEL :::::::::: NP_001 FCGPEHSTEL 680 >>XP_011507916 (OMIM: 610617) PREDICTED: denticleless pr (668 aa) initn: 4521 init1: 4521 opt: 4521 Z-score: 2719.4 bits: 513.7 E(85289): 9.8e-145 Smith-Waterman score: 4521; 99.7% identity (99.9% similar) in 668 aa overlap (63-730:1-668) 40 50 60 70 80 90 pF1KE2 QCSGNDEHTSYGETGVPVPPFGCTFSSAPNMEHVLAVANEEGFVRLYNTESQSFRKKCFK :::::::::::::::::::::::::::::: XP_011 MEHVLAVANEEGFVRLYNTESQSFRKKCFK 10 20 30 100 110 120 130 140 150 pF1KE2 EWMAHWNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EWMAHWNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFE 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 KAVFCTGGRDGNIMVWDTRCNKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KAVFCTGGRDGNIMVWDTRCNKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAPS 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 VDFQQSVTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VDFQQSVTVVLFQDENTLVSAGAVDGIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKL 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE2 GYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFL 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE2 VSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRLNR 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE2 GLEEKPGGDKLSTVGWASQKKKESRPGLVTVTSSQSTPAKAPRVKCNPSNSSPSSAACAP :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: XP_011 GLEEKPGGDKLSTVGWASQKKKESRPGLVTVTSSQSTPAKAPRAKCNPSNSSPSSAACAP 340 350 360 370 380 390 460 470 480 490 500 510 pF1KE2 SCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSS 400 410 420 430 440 450 520 530 540 550 560 570 pF1KE2 PPITPPASETKIMSPRKALIPVSQKSSQAEACSESRNRVKRRLDSSCLESVKQKCVKSCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PPITPPASETKIMSPRKALIPVSQKSSQAEACSESRNRVKRRLDSSCLESVKQKCVKSCN 460 470 480 490 500 510 580 590 600 610 620 630 pF1KE2 CVTELDGQVENLHLDLCCLAGNQEDLSKDSLGPTKSSKIEGAGTSISEPPSPISPYASES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CVTELDGQVENLHLDLCCLAGNQEDLSKDSLGPTKSSKIEGAGTSISEPPSPISPYASES 520 530 540 550 560 570 640 650 660 670 680 690 pF1KE2 CGTLPLPLRPCGEGSEMVGKENSSPENKNWLLAMAAKRKAENPSPRSPSSQTPNSRRQSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 CGTLPLPLRPCGEGSEMVGKENSSPENKNWLLAMAAKRKAENPSPRSPSSQTPNSRRQSG 580 590 600 610 620 630 700 710 720 730 pF1KE2 KTLPSPVTITPSSMRKICTYFHRKSQEDFCGPEHSTEL : :::::::::::::::::::::::::::::::::::: XP_011 KKLPSPVTITPSSMRKICTYFHRKSQEDFCGPEHSTEL 640 650 660 >>NP_001273158 (OMIM: 610617) denticleless protein homol (459 aa) initn: 3110 init1: 3110 opt: 3110 Z-score: 1878.8 bits: 357.6 E(85289): 6.5e-98 Smith-Waterman score: 3110; 99.8% identity (100.0% similar) in 459 aa overlap (272-730:1-459) 250 260 270 280 290 300 pF1KE2 VWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNMT .::::::::::::::::::::::::::::: NP_001 MGYSSLILDSTGSTLFANCTDDNIYMFNMT 10 20 30 310 320 330 340 350 360 pF1KE2 GLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQ 40 50 60 70 80 90 370 380 390 400 410 420 pF1KE2 EVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGLV 100 110 120 130 140 150 430 440 450 460 470 480 pF1KE2 TVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPIN 160 170 180 190 200 210 490 500 510 520 530 540 pF1KE2 RRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQA 220 230 240 250 260 270 550 560 570 580 590 600 pF1KE2 EACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSKD 280 290 300 310 320 330 610 620 630 640 650 660 pF1KE2 SLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENKN 340 350 360 370 380 390 670 680 690 700 710 720 pF1KE2 WLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQEDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQEDF 400 410 420 430 440 450 730 pF1KE2 CGPEHSTEL ::::::::: NP_001 CGPEHSTEL 730 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:31:36 2016 done: Sun Nov 6 20:31:37 2016 Total Scan time: 12.250 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]