FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2071, 730 aa 1>>>pF1KE2071 730 - 730 aa - 730 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.1651+/-0.00102; mu= -2.2320+/- 0.061 mean_var=255.8290+/-52.890, 0's: 0 Z-trim(112.5): 38 B-trim: 0 in 0/50 Lambda= 0.080186 statistics sampled from 13221 (13251) to 13221 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.407), width: 16 Scan time: 4.600 The best scores are: opt bits E(32554) CCDS1502.1 DTL gene_id:51514|Hs108|chr1 ( 730) 4960 587.5 2.5e-167 CCDS65778.1 DTL gene_id:51514|Hs108|chr1 ( 688) 4550 540.0 4.5e-153 >>CCDS1502.1 DTL gene_id:51514|Hs108|chr1 (730 aa) initn: 4960 init1: 4960 opt: 4960 Z-score: 3117.5 bits: 587.5 E(32554): 2.5e-167 Smith-Waterman score: 4960; 99.7% identity (99.9% similar) in 730 aa overlap (1-730:1-730) 10 20 30 40 50 60 pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: CCDS15 VTVTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: CCDS15 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKKLPSPVTITPSSMRKICTYFHRKSQED 670 680 690 700 710 720 730 pF1KE2 FCGPEHSTEL :::::::::: CCDS15 FCGPEHSTEL 730 >>CCDS65778.1 DTL gene_id:51514|Hs108|chr1 (688 aa) initn: 4544 init1: 4544 opt: 4550 Z-score: 2861.6 bits: 540.0 E(32554): 4.5e-153 Smith-Waterman score: 4559; 94.0% identity (94.1% similar) in 730 aa overlap (1-730:1-688) 10 20 30 40 50 60 pF1KE2 MLFNSVLRQPQLGVLRNGWSSQYPLQSLLTGYQCSGNDEHTSYGETGVPVPPFGCTFSSA ::::::::::::::::: : CCDS65 MLFNSVLRQPQLGVLRN------------------------------------------A 10 70 80 90 100 110 120 pF1KE2 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 PNMEHVLAVANEEGFVRLYNTESQSFRKKCFKEWMAHWNAVFDLAWVPGELKLVTAAGDQ 20 30 40 50 60 70 130 140 150 160 170 180 pF1KE2 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 TAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE2 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 QVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVDFQQSVTVVLFQDENTLVSAGAVDGII 140 150 160 170 180 190 250 260 270 280 290 300 pF1KE2 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 KVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGSTLFANCTDDNIYMFNM 200 210 220 230 240 250 310 320 330 340 350 360 pF1KE2 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 TGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIWKVSTPWQPPTVLLGHS 260 270 280 290 300 310 370 380 390 400 410 420 pF1KE2 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 QEVTSVCWCPSDFTKIATCSDDNTLKIWRLNRGLEEKPGGDKLSTVGWASQKKKESRPGL 320 330 340 350 360 370 430 440 450 460 470 480 pF1KE2 VTVTSSQSTPAKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: CCDS65 VTVTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPI 380 390 400 410 420 430 490 500 510 520 530 540 pF1KE2 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 NRRGSVSSVSPKPPSSFKMSIRNWVTRTPSSSPPITPPASETKIMSPRKALIPVSQKSSQ 440 450 460 470 480 490 550 560 570 580 590 600 pF1KE2 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 AEACSESRNRVKRRLDSSCLESVKQKCVKSCNCVTELDGQVENLHLDLCCLAGNQEDLSK 500 510 520 530 540 550 610 620 630 640 650 660 pF1KE2 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS65 DSLGPTKSSKIEGAGTSISEPPSPISPYASESCGTLPLPLRPCGEGSEMVGKENSSPENK 560 570 580 590 600 610 670 680 690 700 710 720 pF1KE2 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKTLPSPVTITPSSMRKICTYFHRKSQED ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: CCDS65 NWLLAMAAKRKAENPSPRSPSSQTPNSRRQSGKKLPSPVTITPSSMRKICTYFHRKSQED 620 630 640 650 660 670 730 pF1KE2 FCGPEHSTEL :::::::::: CCDS65 FCGPEHSTEL 680 730 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:31:35 2016 done: Sun Nov 6 20:31:35 2016 Total Scan time: 4.600 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]