FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KA0928, 1922 aa 1>>>pF1KA0928 1922 - 1922 aa - 1922 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3768+/-0.00112; mu= 19.1621+/- 0.068 mean_var=88.4506+/-17.452, 0's: 0 Z-trim(104.8): 57 B-trim: 0 in 0/50 Lambda= 0.136372 statistics sampled from 8020 (8071) to 8020 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.599), E-opt: 0.2 (0.248), width: 16 Scan time: 4.410 The best scores are: opt bits E(32554) CCDS9931.1 DICER1 gene_id:23405|Hs108|chr14 (1922) 12888 2547.0 0 CCDS55941.1 DICER1 gene_id:23405|Hs108|chr14 (1829) 12023 2376.8 0 CCDS2217.1 IFIH1 gene_id:64135|Hs108|chr2 (1025) 298 69.9 5.8e-11 >>CCDS9931.1 DICER1 gene_id:23405|Hs108|chr14 (1922 aa) initn: 12888 init1: 12888 opt: 12888 Z-score: 13692.8 bits: 2547.0 E(32554): 0 Smith-Waterman score: 12888; 100.0% identity (100.0% similar) in 1922 aa overlap (1-1922:1-1922) 10 20 30 40 50 60 pF1KA0 MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 IDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 IDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA0 PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA0 KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA0 GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA0 SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KA0 QLNYYKQEIPVQPTTSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPVMAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 QLNYYKQEIPVQPTTSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPVMAV 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KA0 MPGTTDTIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 MPGTTDTIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KA0 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KA0 LPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 LPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYED 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KA0 DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFED 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KA0 FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KA0 DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVS 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KA0 CAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 CAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KA0 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KA0 NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KA0 DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM 1810 1820 1830 1840 1850 1860 1870 1880 1890 1900 1910 1920 pF1KA0 EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS99 EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP 1870 1880 1890 1900 1910 1920 pF1KA0 NS :: CCDS99 NS >>CCDS55941.1 DICER1 gene_id:23405|Hs108|chr14 (1829 aa) initn: 12023 init1: 12023 opt: 12023 Z-score: 12773.4 bits: 2376.8 E(32554): 0 Smith-Waterman score: 12023; 100.0% identity (100.0% similar) in 1788 aa overlap (1-1788:1-1788) 10 20 30 40 50 60 pF1KA0 MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KA0 IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KA0 VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KA0 ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KA0 VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KA0 QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KA0 EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KA0 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KA0 GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KA0 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD 550 560 570 580 590 600 610 620 630 640 650 660 pF1KA0 IDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 IDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KA0 GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV 670 680 690 700 710 720 730 740 750 760 770 780 pF1KA0 KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP 730 740 750 760 770 780 790 800 810 820 830 840 pF1KA0 LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KA0 QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI 850 860 870 880 890 900 910 920 930 940 950 960 pF1KA0 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KA0 PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KA0 KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KA0 GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KA0 SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KA0 QLNYYKQEIPVQPTTSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPVMAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 QLNYYKQEIPVQPTTSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPVMAV 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KA0 MPGTTDTIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MPGTTDTIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 1380 pF1KA0 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 1440 pF1KA0 LPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYED 1390 1400 1410 1420 1430 1440 1450 1460 1470 1480 1490 1500 pF1KA0 DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFED 1450 1460 1470 1480 1490 1500 1510 1520 1530 1540 1550 1560 pF1KA0 FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA 1510 1520 1530 1540 1550 1560 1570 1580 1590 1600 1610 1620 pF1KA0 DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVS 1570 1580 1590 1600 1610 1620 1630 1640 1650 1660 1670 1680 pF1KA0 CAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 CAAASVASSRSSVLKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK 1630 1640 1650 1660 1670 1680 1690 1700 1710 1720 1730 1740 pF1KA0 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV 1690 1700 1710 1720 1730 1740 1750 1760 1770 1780 1790 1800 pF1KA0 NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSEKSFLQMYPVPLC 1750 1760 1770 1780 1790 1800 1810 1820 1830 1840 1850 1860 pF1KA0 DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM CCDS55 ENCLKWNQKLPNLARLRELTTGRSESLWK 1810 1820 >>CCDS2217.1 IFIH1 gene_id:64135|Hs108|chr2 (1025 aa) initn: 376 init1: 203 opt: 298 Z-score: 310.4 bits: 69.9 E(32554): 5.8e-11 Smith-Waterman score: 385; 26.8% identity (55.2% similar) in 594 aa overlap (45-589:309-865) 20 30 40 50 60 70 pF1KA0 QLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALD-HNTIVCLNTGSGKTFI : ::.:. . ::. .: :.:: :::::: . CCDS22 NMGSDSGTMGSDSDEENVAARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRV 280 290 300 310 320 330 80 90 100 110 120 pF1KA0 AVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK-----VGEYSNLE :: ..:. . . :. :: .. :::.. ...:. . . :: .: .. . CCDS22 AVYIAKD-HLDKKKKASEPGK-VIVLVNKV-LLVEQLFRKEFQPFLKKWYRVIGLSGDTQ 340 350 360 370 380 390 130 140 150 160 170 180 pF1KA0 VNASWTKERWNQEFTKH-QVLIMTCYVALNVL---KNGY---LSLSDINLLVFDECHLAI .. :. : .: ...: : . : : .:: ..:::..:...:::: . CCDS22 LKISFP------EVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTN 400 410 420 430 440 190 200 210 220 pF1KA0 LDHPYREIM------KLC------ENCP--SCPRILGLTASI-LNGKCDPEELEEKIQKL . : .:: :: :: : :.::::::: ..: . ::.: :: CCDS22 KEAVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILKL 450 460 470 480 490 500 230 240 250 260 270 280 pF1KA0 EKILKS-NAETATD-LVVLDRYTSQPCE--IVVDCGPFTDRSGLYERLLMELEEALNFIN : . . .:. . : : ..::. ..: : .. . :.:: . . .. CCDS22 CANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADA---TREDPFKEKLLEIMTRIQTY-- 510 520 530 540 550 560 290 300 310 320 330 340 pF1KA0 DCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQ-EELH :..: : . . : . .:. ... . ...:.:: . : .. CCDS22 -CQMSPMSDFGTQPYEQWAIQMEKKAAK------EGNRKERVCAEHLRKYNEALQINDTI 570 580 590 600 610 350 360 370 380 390 pF1KA0 RKFLLFT--DTFLR----KIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQF : . .: .:: : :. :. : . : .. . .. . : : ..: CCDS22 RMIDAYTHLETFYNEEKDKKFAVIEDD-SDEGGDDEYCDGDEDED-DLKKPLKLDETDRF 620 630 640 650 660 670 400 410 420 430 440 450 pF1KA0 ESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILC---GIIFVERRY . ...: .. . .. .. . : :. : .... .: ::::.. : CCDS22 LMTLFFENNKMLKRLA------ENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQ 680 690 700 710 720 460 470 480 490 500 510 pF1KA0 TAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHE .: .:.. : : ... :.. . ..: : :... . . . : :.::. :::. . CCDS22 SAYALSQWITE-NEKFAEVGVKAHHLI---GAGHSSEFKPMTQNE---QKEVISKFRTGK 730 740 750 760 770 780 520 530 540 550 560 pF1KA0 TNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADT------ ::::::...:::.:: .::.:.:. : :. ..::..::::: :.:...: . CCDS22 INLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIE 790 800 810 820 830 840 570 580 590 600 610 620 pF1KA0 -DKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYVLRPDDGGPRV . ...:.: . ::::. . : CCDS22 HETVNDFREKM-MYKAIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPS 850 860 870 880 890 900 1922 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:44:22 2016 done: Sun Nov 6 20:44:23 2016 Total Scan time: 4.410 Total Display time: 0.270 Function used was FASTA [36.3.4 Apr, 2011]