FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7280, 1336 aa 1>>>pF1KB7280 1336 - 1336 aa - 1336 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.7740+/-0.000555; mu= -11.7920+/- 0.035 mean_var=760.8521+/-160.811, 0's: 0 Z-trim(123.5): 572 B-trim: 3722 in 2/60 Lambda= 0.046497 statistics sampled from 42736 (43397) to 42736 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.509), width: 16 Scan time: 21.670 The best scores are: opt bits E(85289) NP_569712 (OMIM: 120328,267750) collagen alpha-1(X (1336) 9750 670.8 1.8e-191 NP_085059 (OMIM: 120328,267750) collagen alpha-1(X (1516) 9509 654.7 1.5e-186 NP_569711 (OMIM: 120328,267750) collagen alpha-1(X (1751) 9496 653.9 2.9e-186 NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 1946 147.3 7.6e-34 XP_016869755 (OMIM: 120215,130000) PREDICTED: coll (1715) 1919 145.6 2.9e-33 NP_001265003 (OMIM: 120215,130000) collagen alpha- (1838) 1919 145.6 3.1e-33 NP_000084 (OMIM: 120215,130000) collagen alpha-1(V (1838) 1919 145.6 3.1e-33 XP_016884752 (OMIM: 301050,303630) PREDICTED: coll (1136) 1895 143.7 6.9e-33 NP_203699 (OMIM: 301050,303630) collagen alpha-5(I (1691) 1895 144.0 8.9e-33 XP_011529151 (OMIM: 301050,303630) PREDICTED: coll (1696) 1895 144.0 8.9e-33 XP_016855826 (OMIM: 120280,154780,228520,603932,60 (1323) 1875 142.5 1.9e-32 XP_016855825 (OMIM: 120280,154780,228520,603932,60 (1515) 1875 142.6 2.1e-32 NP_542197 (OMIM: 120280,154780,228520,603932,60484 (1690) 1875 142.6 2.3e-32 NP_001177638 (OMIM: 120280,154780,228520,603932,60 (1767) 1875 142.6 2.3e-32 NP_001845 (OMIM: 120280,154780,228520,603932,60484 (1806) 1875 142.6 2.4e-32 NP_542196 (OMIM: 120280,154780,228520,603932,60484 (1818) 1875 142.7 2.4e-32 XP_016855824 (OMIM: 120280,154780,228520,603932,60 (1855) 1875 142.7 2.4e-32 XP_016855823 (OMIM: 120280,154780,228520,603932,60 (1857) 1875 142.7 2.4e-32 XP_005257115 (OMIM: 114000,120150,130000,130060,16 (1374) 1862 141.6 3.6e-32 XP_011508875 (OMIM: 120190,130000) PREDICTED: coll (1453) 1852 141.0 6e-32 NP_000384 (OMIM: 120190,130000) collagen alpha-2(V (1499) 1852 141.0 6.1e-32 XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 1829 139.5 1.8e-31 NP_000486 (OMIM: 301050,303630) collagen alpha-5(I (1685) 1810 138.3 4.6e-31 XP_016884749 (OMIM: 301050,303630) PREDICTED: coll (1690) 1810 138.3 4.6e-31 XP_011508867 (OMIM: 120131,203780) PREDICTED: coll (1424) 1807 138.0 4.8e-31 XP_011508871 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31 XP_016858789 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31 XP_011508872 (OMIM: 120131,203780) PREDICTED: coll (1414) 1803 137.7 5.7e-31 XP_011508870 (OMIM: 120131,203780) PREDICTED: coll (1419) 1802 137.6 6e-31 XP_011508868 (OMIM: 120131,203780) PREDICTED: coll (1420) 1802 137.6 6e-31 XP_011508869 (OMIM: 120131,203780) PREDICTED: coll (1420) 1802 137.6 6e-31 XP_016858788 (OMIM: 120131,203780) PREDICTED: coll (1518) 1802 137.7 6.3e-31 XP_011508864 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31 XP_016858787 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31 XP_011508863 (OMIM: 120131,203780) PREDICTED: coll (1608) 1802 137.7 6.5e-31 XP_011508861 (OMIM: 120131,203780) PREDICTED: coll (1612) 1802 137.7 6.5e-31 XP_011508862 (OMIM: 120131,203780) PREDICTED: coll (1612) 1802 137.7 6.5e-31 XP_006712309 (OMIM: 120131,203780) PREDICTED: coll (1627) 1802 137.7 6.6e-31 XP_016858785 (OMIM: 120131,203780) PREDICTED: coll (1659) 1802 137.7 6.6e-31 NP_000083 (OMIM: 120131,203780) collagen alpha-4(I (1690) 1802 137.7 6.7e-31 XP_005246338 (OMIM: 120131,203780) PREDICTED: coll (1690) 1802 137.7 6.7e-31 XP_005246334 (OMIM: 104200,120070,141200,203780) P (1635) 1797 137.4 8.3e-31 XP_016884748 (OMIM: 301050,303630) PREDICTED: coll (1693) 1796 137.3 8.9e-31 XP_005246339 (OMIM: 120131,203780) PREDICTED: coll (1505) 1789 136.8 1.1e-30 XP_011519350 (OMIM: 120130,175780,180000,607595,61 (1605) 1784 136.5 1.5e-30 NP_001836 (OMIM: 120130,175780,180000,607595,61177 (1669) 1784 136.5 1.5e-30 XP_011508858 (OMIM: 104200,120070,141200,203780) P (1257) 1780 136.1 1.5e-30 XP_011508857 (OMIM: 104200,120070,141200,203780) P (1609) 1780 136.2 1.8e-30 NP_000082 (OMIM: 104200,120070,141200,203780) coll (1670) 1780 136.2 1.9e-30 XP_011508874 (OMIM: 120131,203780) PREDICTED: coll (1132) 1773 135.6 2e-30 >>NP_569712 (OMIM: 120328,267750) collagen alpha-1(XVIII (1336 aa) initn: 9750 init1: 9750 opt: 9750 Z-score: 3558.3 bits: 670.8 E(85289): 1.8e-191 Smith-Waterman score: 9750; 100.0% identity (100.0% similar) in 1336 aa overlap (1-1336:1-1336) 10 20 30 40 50 60 pF1KB7 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 DPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 DPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 LGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 LGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 EEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 EEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 GDDSDGASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GDDSDGASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 EQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 EQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 CLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 CLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB7 PQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB7 EALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 EALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB7 GPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB7 GPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADG 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB7 VPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 VPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDG 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB7 SVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 SVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQ 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB7 KGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 KGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPG 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB7 PPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB7 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESI 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KB7 RGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 RGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGT 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KB7 MGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 MGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGT 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KB7 DNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 DNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSY 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 1200 pF1KB7 VHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 VHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFR 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 1260 pF1KB7 AFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 AFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKD 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 1320 pF1KB7 VLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 VLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHH 1270 1280 1290 1300 1310 1320 1330 pF1KB7 AYIVLCIENSFMTASK :::::::::::::::: NP_569 AYIVLCIENSFMTASK 1330 >>NP_085059 (OMIM: 120328,267750) collagen alpha-1(XVIII (1516 aa) initn: 9496 init1: 9496 opt: 9509 Z-score: 3470.3 bits: 654.7 E(85289): 1.5e-186 Smith-Waterman score: 9509; 98.3% identity (98.5% similar) in 1331 aa overlap (6-1336:189-1516) 10 20 30 pF1KB7 MAPRCPWPWPRRRRLLDVLAPLVLLLGVRAASAEP : : : : :::. : . NP_085 STPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLT---GPSVPPPSS 160 170 180 190 200 210 40 50 60 70 80 90 pF1KB7 ERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 ERISEEVGLLQLLGDPPPQQVTQTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLL 220 230 240 250 260 270 100 110 120 130 140 150 pF1KB7 FHIRPATEGPGVLFAITDSAQAMVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 FHIRPATEGPGVLFAITDSAQAMVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRL 280 290 300 310 320 330 160 170 180 190 200 210 pF1KB7 PAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 PAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDK 340 350 360 370 380 390 220 230 240 250 260 270 pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP 400 410 420 430 440 450 280 290 300 310 320 330 pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKE 460 470 480 490 500 510 340 350 360 370 380 390 pF1KB7 GGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 GGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQGPPGPP 520 530 540 550 560 570 400 410 420 430 440 450 pF1KB7 GRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 GRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPG 580 590 600 610 620 630 460 470 480 490 500 510 pF1KB7 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 PPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV 640 650 660 670 680 690 520 530 540 550 560 570 pF1KB7 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP 700 710 720 730 740 750 580 590 600 610 620 630 pF1KB7 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP 760 770 780 790 800 810 640 650 660 670 680 690 pF1KB7 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD 820 830 840 850 860 870 700 710 720 730 740 750 pF1KB7 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS 880 890 900 910 920 930 760 770 780 790 800 810 pF1KB7 PGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 PGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPG 940 950 960 970 980 990 820 830 840 850 860 870 pF1KB7 MNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 MNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGN 1000 1010 1020 1030 1040 1050 880 890 900 910 920 930 pF1KB7 QGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 QGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGS 1060 1070 1080 1090 1100 1110 940 950 960 970 980 990 pF1KB7 SLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 SLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSF 1120 1130 1140 1150 1160 1170 1000 1010 1020 1030 1040 1050 pF1KB7 PGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 PGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQE 1180 1190 1200 1210 1220 1230 1060 1070 1080 1090 1100 1110 pF1KB7 ELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 ELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARPWRA 1240 1250 1260 1270 1280 1290 1120 1130 1140 1150 1160 1170 pF1KB7 DDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 DDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGG 1300 1310 1320 1330 1340 1350 1180 1190 1200 1210 1220 1230 pF1KB7 MRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 MRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPS 1360 1370 1380 1390 1400 1410 1240 1250 1260 1270 1280 1290 pF1KB7 WEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_085 WEALFSGSEGPLKPGARIFSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEA 1420 1430 1440 1450 1460 1470 1300 1310 1320 1330 pF1KB7 PSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK ::::::::::::::::::::::::::::::::::::::::: NP_085 PSATGQASSLLGGRLLGQSAASCHHAYIVLCIENSFMTASK 1480 1490 1500 1510 >>NP_569711 (OMIM: 120328,267750) collagen alpha-1(XVIII (1751 aa) initn: 9496 init1: 9496 opt: 9496 Z-score: 3464.9 bits: 653.9 E(85289): 2.9e-186 Smith-Waterman score: 9496; 100.0% identity (100.0% similar) in 1301 aa overlap (36-1336:451-1751) 10 20 30 40 50 60 pF1KB7 PWPWPRRRRLLDVLAPLVLLLGVRAASAEPERISEEVGLLQLLGDPPPQQVTQTDDPDVG :::::::::::::::::::::::::::::: NP_569 SRLGGGRLPVACASLPTQEDGYCVLIGPAAERISEEVGLLQLLGDPPPQQVTQTDDPDVG 430 440 450 460 470 480 70 80 90 100 110 120 pF1KB7 LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 LAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATEGPGVLFAITDSAQAMVLLGVKL 490 500 510 520 530 540 130 140 150 160 170 180 pF1KB7 SGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 SGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALYVDCEEFQR 550 560 570 580 590 600 190 200 210 220 230 240 pF1KB7 MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 MPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD 610 620 630 640 650 660 250 260 270 280 290 300 pF1KB7 GASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GASGDSGSGLGDARELLREETGAALKPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTV 670 680 690 700 710 720 310 320 330 340 350 360 pF1KB7 ASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 ASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGP 730 740 750 760 770 780 370 380 390 400 410 420 pF1KB7 PGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PGLPCPVSPLGPAGPALQTVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFP 790 800 810 820 830 840 430 440 450 460 470 480 pF1KB7 GTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GTPGDVGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRG 850 860 870 880 890 900 490 500 510 520 530 540 pF1KB7 PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGR 910 920 930 940 950 960 550 560 570 580 590 600 pF1KB7 EGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 EGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP 970 980 990 1000 1010 1020 610 620 630 640 650 660 pF1KB7 GLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFP 1030 1040 1050 1060 1070 1080 670 680 690 700 710 720 pF1KB7 GLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDGSVLSV 1090 1100 1110 1120 1130 1140 730 740 750 760 770 780 pF1KB7 PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKG 1150 1160 1170 1180 1190 1200 790 800 810 820 830 840 pF1KB7 EPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 EPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPP 1210 1220 1230 1240 1250 1260 850 860 870 880 890 900 pF1KB7 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLE 1270 1280 1290 1300 1310 1320 910 920 930 940 950 960 pF1KB7 AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 AEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPG 1330 1340 1350 1360 1370 1380 970 980 990 1000 1010 1020 pF1KB7 PPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 PPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASS 1390 1400 1410 1420 1430 1440 1030 1040 1050 1060 1070 1080 pF1KB7 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 GVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVA 1450 1460 1470 1480 1490 1500 1090 1100 1110 1120 1130 1140 pF1KB7 ALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 ALQPPVVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRP 1510 1520 1530 1540 1550 1560 1150 1160 1170 1180 1190 1200 pF1KB7 ARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 ARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSS 1570 1580 1590 1600 1610 1620 1210 1220 1230 1240 1250 1260 pF1KB7 RLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 RLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARIFSFDGKDVLRHP 1630 1640 1650 1660 1670 1680 1270 1280 1290 1300 1310 1320 pF1KB7 TWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_569 TWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQSAASCHHAYIVL 1690 1700 1710 1720 1730 1740 1330 pF1KB7 CIENSFMTASK ::::::::::: NP_569 CIENSFMTASK 1750 >>NP_000081 (OMIM: 120180,130020,130050) collagen alpha- (1466 aa) initn: 785 init1: 475 opt: 1946 Z-score: 728.6 bits: 147.3 E(85289): 7.6e-34 Smith-Waterman score: 2082; 41.7% identity (54.1% similar) in 917 aa overlap (183-1026:343-1198) 160 170 180 190 200 210 pF1KB7 FRLPAFVGQWTHLALSVAGGFVALYVDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGAD : : :.. : ::.. .: : NP_000 LPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPGQRGEPG 320 330 340 350 360 370 220 230 240 250 260 270 pF1KB7 PDKFQGVIAELKVRRDPQVSPMHCLDEEG-DDSDGASGDSG-SGLGDARELLREETGAAL :. :. . : : : . : :..:. : .:. : :. .: NP_000 PQGHAGA-------QGPPGPP-------GINGSPGGKGEMGPAGIPGAPGLM-----GAR 380 390 400 410 280 290 300 310 320 330 pF1KB7 KPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPG : :.: .. : :.. : ... : . : .:: ... ::. .:: NP_000 GP--PGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPG 420 430 440 450 460 470 340 350 360 370 380 pF1KB7 GRVKEGGLKGQKGEPGVPGPPGRAGPPGSPCLPGPPG---LPCPVSPLGPAG-PALQTVP . .:: : :: :.:: : ::: : : :: : : :..: : :: :. . :: NP_000 -EPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVP 480 490 500 510 520 530 390 400 410 420 430 440 pF1KB7 GPQGPPGPPGRDGTPGRDGEPGDPGEDGK------PGDTGPQGFPGTPGDVGPKGDKGDP : : : :: : :: ::.:: :: .:. :: .::.: ::. : ::::. : : NP_000 GGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAP 540 550 560 570 580 590 450 460 470 480 490 pF1KB7 GV-GERGPPGPQGPPGPPGPSFRHDKLTFIDMEG-SGFGGDLEALRGP------RGFPGP : :::: :: :: :::: .. . : .: ::: .. :: .:.:: NP_000 GKNGERGGPGGPGPQGPPG---KNGETGPQGPPGPTGPGGD-KGDTGPPGPQGLQGLPGT 600 610 620 630 640 500 510 520 530 540 pF1KB7 PGPPGVPGLPGEPGRFG-VNSSDVPGPAGLPGVPGREGPPGFPGLPG------PPGPPGR :::: : ::::: : ... .:: : :.::..::::. : :: :::: : NP_000 GGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGG 650 660 670 680 690 700 550 560 570 580 590 pF1KB7 EG---PPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGA---PGPAGPPGPPGP .: ::: : :. : : ::..:. :.::: : .:: : :: :: :: :: :: NP_000 KGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGPGADGVPGKDGPRGPTGP 710 720 730 740 750 760 600 610 620 630 640 pF1KB7 PGPPGP-GLPA-----GFDDMEGSGGPFWSTA-RSADGPQGP---PGLPGLKGDPGVPGL ::::: : :. : . : .:: : . :. :: :: :: :: .:.:: : NP_000 IGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGE 770 780 790 800 810 820 650 660 670 680 690 700 pF1KB7 PGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGV-GQPGLPGPPG- :: :: : : :: : :: : ::: ::.: .: :: : :: : : ::::::: NP_000 RGAPGEKGEGGPPGVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGS 830 840 850 860 870 880 710 720 730 740 750 760 pF1KB7 -----PPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEK :::: .:: ::: : : : :: .::::. :. ::.:::: .: NP_000 NGNPGPPGPS-GSPGKDGP----PGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPP 890 900 910 920 930 940 770 780 790 pF1KB7 GEPG-----------SIFSPDG-----GALGPAQ-KGAKGEPGF------RGPPGPYGRP : :: .. .: : :. :: :: .:.:: :::::: : : NP_000 GAPGPLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSGERGPPGPQGLP 950 960 970 980 990 1000 800 810 820 830 840 850 pF1KB7 GYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSN : : : ::: : :: .:: :. : :: . : : :: :: :: ::::: :: .. NP_000 GLAGTAGEPGRDGNPGSDGLPGRDGSPGGKG-DRGENGSPGAPGAPGHPGPPG-PVGPAG 1010 1020 1030 1040 1050 860 870 880 890 900 910 pF1KB7 VFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQLEAEMKGEKGDRGDAG .. .. :: : :. : ::: :..: :: :: :. ::: :.:: :: NP_000 KSGDRGESGPAG-PA--GAPGPAGSRGAPGPQGPRGD------------KGETGERGAAG 1060 1070 1080 1090 1100 920 930 940 950 960 970 pF1KB7 QKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQGPPGIGYEG ::.:: ::. : :: ::: : .: : ::: : :: ::.:::: .: NP_000 IKGHRGFPGNPG-----APGSPGPAGQQGAIGSPGPAGPR-----GPVGPSGPPG--KDG 1110 1120 1130 1140 1150 980 990 1000 1010 1020 1030 pF1KB7 RQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQ .: ::: ::::: . : .: . . :: :: ::::::::. : : NP_000 TSGHPGPIGPPGPRGNRG-ERGSEGSPGHPGQPGPPGPPGAPGPCCGGVGAAAIAGIGGE 1160 1170 1180 1190 1200 1210 1040 1050 1060 1070 1080 1090 pF1KB7 VHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNP NP_000 KAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPARNCRDLKFCHPE 1220 1230 1240 1250 1260 1270 >-- initn: 1376 init1: 373 opt: 688 Z-score: 272.6 bits: 62.9 E(85289): 1.9e-08 Smith-Waterman score: 768; 42.9% identity (52.9% similar) in 310 aa overlap (368-675:72-342) 340 350 360 370 380 390 pF1KB7 LKGQKGEPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQTVPGPQ-GPPGPPG : :: .: : : . : : .: ::. NP_000 RDVWKPEPCQICVCDSGSVLCDDIICDDQELDCP-NPEIPFGECCAVCPQPPTAPTRPPN 50 60 70 80 90 100 400 410 420 430 440 450 pF1KB7 RDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGPKGDKGDPGVGERGPPGPQGPPGP .: : :.:: :: :. :: : : ::.::. :: ::. : : :::. .: NP_000 GQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGP------PGICESCPTGPQNY-SP 110 120 130 140 150 460 470 480 490 500 510 pF1KB7 PGPSFRHDKLTFIDME-GSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDV :. :.. : . :: : . :: : ::::::::. : :: :: : . NP_000 QYDSY--------DVKSGVAVGG-LAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQ---- 160 170 180 190 200 520 530 540 550 560 570 pF1KB7 PGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGP :: : :: : :::: :: :: :: :..: :: :. : : : :: :: : :: NP_000 -GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGF 210 220 230 240 250 580 590 600 610 620 630 pF1KB7 AGARGESGLAGAPGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPP : .:. :. : : : : :: : : :: : .: : ::.:: NP_000 PGMKGHRGFDGRNGEKGETGAPGLKGENG--LP-------GENG--------APGPMGPR 260 270 280 290 300 640 650 660 670 680 690 pF1KB7 GLPGLKGDPGVPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKD : :: .: ::.:: ::.:. :: : : :: :: : :: NP_000 GAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSN 310 320 330 340 350 360 700 710 720 730 740 750 pF1KB7 GVGQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGS NP_000 GAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGAN 370 380 390 400 410 420 >>XP_016869755 (OMIM: 120215,130000) PREDICTED: collagen (1715 aa) initn: 899 init1: 486 opt: 1919 Z-score: 718.1 bits: 145.6 E(85289): 2.9e-33 Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577) 220 230 240 250 260 270 pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP : : ::: : :. : : . :. XP_016 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ-- 550 560 570 580 590 280 290 300 310 320 330 pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR .: : :: .:. . .:. .: ::. .::. . . .:: . :: XP_016 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG-- 600 610 620 630 640 340 350 360 370 380 pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP--- : : .:. : : ::::: ..:: : : ::: :: : .: :: :: XP_016 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV 650 660 670 680 690 390 400 410 420 430 pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP ... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: : XP_016 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA 700 710 720 730 740 750 440 450 460 470 pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF : : :: ::.: ::::::: : ::: . . ..:. :: XP_016 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF 760 770 780 790 800 810 480 490 500 510 520 pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG ::. ...: :: ::::: : : : :: : :.. : :: : ::: :: XP_016 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG 820 830 840 850 860 870 530 540 550 560 570 pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG :.:: ::::: :: ::: :..:: : :..: : .: :: ::..: XP_016 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG 880 890 900 910 920 930 580 590 600 610 620 pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW . :::: :: : : ::.: ::: ::::::: :: :. ::. : :: XP_016 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 940 950 960 970 980 990 630 640 650 660 pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG .. :. :: :::: :::: ::::: :::: : : : XP_016 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG 1000 1010 1020 1030 1040 1050 670 680 690 700 710 pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV :: :::: .: :: :: : :: ::.: : : .: :: ::: :::::. XP_016 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA- 1060 1070 1080 1090 1100 1110 720 730 740 750 760 pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG .:. . . : :: :: :. .:.:::::: ::..: :..:: : :: XP_016 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG 1120 1130 1140 1150 1160 1170 770 780 790 800 810 820 pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK :.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..:: XP_016 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP 1180 1190 1200 1210 1220 1230 830 840 850 860 pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP--- : :: :... :. : :::::: :: :: : : . . .. .:...:: XP_016 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 1240 1250 1260 1270 1280 1290 870 880 890 900 pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM :::::. ::::::: .:: .::::: :: : XP_016 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE 1300 1310 1320 1330 1340 1350 910 920 930 940 950 960 pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP : :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: : XP_016 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE 1360 1370 1380 1390 1400 1410 970 980 990 1000 1010 1020 pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG- : .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: : XP_016 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL 1420 1430 1440 1450 1460 1470 1030 1040 1050 1060 1070 1080 pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD ..:: . . ...: . : : :: : . . :. : . .: XP_016 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT 1480 1490 1500 1510 1520 1090 1100 1110 1120 1130 pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA . . . :: . : :. . ::. : ... .:: : : :: : XP_016 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ 1530 1540 1550 1560 1570 1140 1150 1160 1170 1180 1190 pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG XP_016 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC 1580 1590 1600 1610 1620 1630 >>NP_001265003 (OMIM: 120215,130000) collagen alpha-1(V) (1838 aa) initn: 899 init1: 486 opt: 1919 Z-score: 717.7 bits: 145.6 E(85289): 3.1e-33 Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577) 220 230 240 250 260 270 pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP : : ::: : :. : : . :. NP_001 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ-- 550 560 570 580 590 280 290 300 310 320 330 pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR .: : :: .:. . .:. .: ::. .::. . . .:: . :: NP_001 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG-- 600 610 620 630 640 340 350 360 370 380 pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP--- : : .:. : : ::::: ..:: : : ::: :: : .: :: :: NP_001 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV 650 660 670 680 690 390 400 410 420 430 pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP ... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: : NP_001 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA 700 710 720 730 740 750 440 450 460 470 pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF : : :: ::.: ::::::: : ::: . . ..:. :: NP_001 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF 760 770 780 790 800 810 480 490 500 510 520 pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG ::. ...: :: ::::: : : : :: : :.. : :: : ::: :: NP_001 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG 820 830 840 850 860 870 530 540 550 560 570 pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG :.:: ::::: :: ::: :..:: : :..: : .: :: ::..: NP_001 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG 880 890 900 910 920 930 580 590 600 610 620 pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW . :::: :: : : ::.: ::: ::::::: :: :. ::. : :: NP_001 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 940 950 960 970 980 990 630 640 650 660 pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG .. :. :: :::: :::: ::::: :::: : : : NP_001 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG 1000 1010 1020 1030 1040 1050 670 680 690 700 710 pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV :: :::: .: :: :: : :: ::.: : : .: :: ::: :::::. NP_001 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA- 1060 1070 1080 1090 1100 1110 720 730 740 750 760 pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG .:. . . : :: :: :. .:.:::::: ::..: :..:: : :: NP_001 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG 1120 1130 1140 1150 1160 1170 770 780 790 800 810 820 pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK :.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..:: NP_001 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP 1180 1190 1200 1210 1220 1230 830 840 850 860 pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP--- : :: :... :. : :::::: :: :: : : . . .. .:...:: NP_001 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 1240 1250 1260 1270 1280 1290 870 880 890 900 pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM :::::. ::::::: .:: .::::: :: : NP_001 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE 1300 1310 1320 1330 1340 1350 910 920 930 940 950 960 pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP : :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: : NP_001 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE 1360 1370 1380 1390 1400 1410 970 980 990 1000 1010 1020 pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG- : .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: : NP_001 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL 1420 1430 1440 1450 1460 1470 1030 1040 1050 1060 1070 1080 pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD ..:: . . ...: . : : :: : . . :. : . .: NP_001 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT 1480 1490 1500 1510 1520 1090 1100 1110 1120 1130 pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA . . . :: . : :. . ::. : ... .:: : : :: : NP_001 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ 1530 1540 1550 1560 1570 1140 1150 1160 1170 1180 1190 pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG NP_001 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC 1580 1590 1600 1610 1620 1630 >>NP_000084 (OMIM: 120215,130000) collagen alpha-1(V) ch (1838 aa) initn: 899 init1: 486 opt: 1919 Z-score: 717.7 bits: 145.6 E(85289): 3.1e-33 Smith-Waterman score: 2091; 39.3% identity (52.3% similar) in 1048 aa overlap (246-1132:571-1577) 220 230 240 250 260 270 pF1KB7 FQGVIAELKVRRDPQVSPMHCLDEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLP : : ::: : :. : : . :. NP_000 AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSG-G-----LKGEPGD-VGPQ-- 550 560 570 580 590 280 290 300 310 320 330 pF1KB7 APPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVST---WDGSVRTPGGR .: : :: .:. . .:. .: ::. .::. . . .:: . :: NP_000 GPRGVQGPPGPAGKPGRRGRA---------GSDGARGMPGQTGPKGDRGFDGLAGLPG-- 600 610 620 630 640 340 350 360 370 380 pF1KB7 VKEGGLKGQKGEPGVPGPPG---------RAGPPGSPCLPGPPGLPCPVSPLGPAGP--- : : .:. : : ::::: ..:: : : ::: :: : .: :: :: NP_000 --EKGHRGDPGPSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGV 650 660 670 680 690 390 400 410 420 430 pF1KB7 -ALQTVPGP------QGPPGPPGRDGTPGRDGEPGDPGEDGKPGDTGPQGFPGTPGDVGP ... ::: :: :::::..:.:: .: :: : : ::. :: : :: :: : NP_000 TGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGA 700 710 720 730 740 750 440 450 460 470 pF1KB7 KGDKGDPGV----GERG---PPGPQGPPGPPGPSFRHDKLTFIDMEGS----------GF : : :: ::.: ::::::: : ::: . . ..:. :: NP_000 DGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGF 760 770 780 790 800 810 480 490 500 510 520 pF1KB7 GGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVP-GPAG---------LPGVPG ::. ...: :: ::::: : : : :: : :.. : :: : ::: :: NP_000 KGDM-GIKGDRGEIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPG 820 830 840 850 860 870 530 540 550 560 570 pF1KB7 REGP------PGFPG---------LPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKG :.:: ::::: :: ::: :..:: : :..: : .: :: ::..: NP_000 RQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSG 880 890 900 910 920 930 580 590 600 610 620 pF1KB7 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPG----PGLPA-----GFDDMEGSGGPFW . :::: :: : : ::.: ::: ::::::: :: :. ::. : :: NP_000 GDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPG 940 950 960 970 980 990 630 640 650 660 pF1KB7 STA-------------RSADGPQGPPG---LPGL------KGDPGVPGLPGAKGEVGADG .. :. :: :::: :::: ::::: :::: : : : NP_000 VVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRG 1000 1010 1020 1030 1040 1050 670 680 690 700 710 pF1KB7 VPGFPGLPGR------EGIAGPQGPKGDRGSRGEKGDPGKDG-VGQPGLPGPPGPPGPVV :: :::: .: :: :: : :: ::.: : : .: :: ::: :::::. NP_000 FPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPA- 1060 1070 1080 1090 1100 1110 720 730 740 750 760 pF1KB7 YVSEQDGSVLSVP-GPEGRPGF---AGFPGPAGP---------KGNLGSKGERGSPGPKG .:. . . : :: :: :. .:.:::::: ::..: :..:: : :: NP_000 --GEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKG 1120 1130 1140 1150 1160 1170 770 780 790 800 810 820 pF1KB7 EKGEPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLK :.: :: .:.: :. .:: :::: :: : .:. : .: :::: :: :..:: NP_000 EQGPPGPT-GPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLP 1180 1190 1200 1210 1220 1230 830 840 850 860 pF1KB7 GEKGEPGDASLGFGMRGMPGPPGP------PGPPGPPGTP--VYDSNVFAESSRPGP--- : :: :... :. : :::::: :: :: : : . . .. .:...:: NP_000 GPPGEKGETG-DVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIGNPGAVGEKGEPGEAGE 1240 1250 1260 1270 1280 1290 870 880 890 900 pF1KB7 PGLPGNQGPPGPKGAKGE---------VGPPGP------------PGQFPFDFLQLEAEM :::::. ::::::: .:: .::::: :: : NP_000 PGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE 1300 1310 1320 1330 1340 1350 910 920 930 940 950 960 pF1KB7 KGEKGDRGDAGQKGERGEPGGGGFFG-SSLPGPPGPPGPRGYPGIPGPKG-ESIRGQPGP : :. : :.::. :::: : : .. ::: :::: :: :: ::.: .. .: : NP_000 PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGE 1360 1370 1380 1390 1400 1410 970 980 990 1000 1010 1020 pF1KB7 PGPQGPPG-IGYEGRQGPPGPPGPPGPPSFPGP-HRQTI-SVPGPPGPPGPPGPPGTMG- : .:::: : : :: :: ::: : ..::: .: . . ::: ::::: :::: : NP_000 AGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGL 1420 1430 1440 1450 1460 1470 1030 1040 1050 1060 1070 1080 pF1KB7 -ASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFRKVQLEARTPLPRGTD ..:: . . ...: . : : :: : . . :. : . .: NP_000 KGDSGPKGEKGHPGLIGLIG--PPG------EQGE---KGDRGLPGPQGSSGPKGEQGIT 1480 1490 1500 1510 1520 1090 1100 1110 1120 1130 pF1KB7 NEVAALQPPVVQLHDSNPYPR--REHPHPTARPWRADDILASPPRLPEP-----QPYPGA . . . :: . : :. . ::. : ... .:: : : :: : NP_000 GPSGPIGPPGPPGLPGPPGPKGAKGSSGPTG-P-KGEAGHPGPPGPPGPPGEVIQPLPIQ 1530 1540 1550 1560 1570 1140 1150 1160 1170 1180 1190 pF1KB7 PHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG NP_000 ASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKLEIEQMKRPLGTQQNPARTC 1580 1590 1600 1610 1620 1630 >>XP_016884752 (OMIM: 301050,303630) PREDICTED: collagen (1136 aa) initn: 3059 init1: 930 opt: 1895 Z-score: 711.4 bits: 143.7 E(85289): 6.9e-33 Smith-Waterman score: 2082; 41.1% identity (54.9% similar) in 947 aa overlap (301-1183:4-889) 280 290 300 310 320 330 pF1KB7 KPRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGAQTLPGSDSVSTWDGSVRTPG .. ..: :: ::: .. :: :: XP_016 MKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 10 20 30 340 350 360 370 380 pF1KB7 GRVKEGGL--KGQKG---EPGVPGPPGRAGPPGSPCLPGPPGLPCPVSPLGPAGPALQT- . . ::. ::..: .::.:: :: :: : : . :::: ::. : : : . XP_016 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGF-GPPG---PVGEKGIQGVAGNPG 40 50 60 70 80 390 400 410 420 430 440 pF1KB7 VPGPQGPPGPPGRDGT-PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDP :: :: : ::. : ::. : ::.::.:: ::: : : :: :: : ::. : : XP_016 QPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIP 90 100 110 120 130 140 450 460 470 480 490 500 pF1KB7 GVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPG :.: :::::.: :: ::: : : : :. ::::::: :: XP_016 GIGLPGPPGPKGFPGIPGPP--------------GAPGT----PGRIGLEGPPGPPGFPG 150 160 170 180 190 510 520 530 540 550 560 pF1KB7 LPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGE :::: :.. . ::: :::: : :: : :.::::::::: : : : ::..: XP_016 PKGEPG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGP 200 210 220 230 240 570 580 590 600 610 pF1KB7 AGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGG : :: : : :: :..: : : ::: : :: : :: : :: : :.: . : : XP_016 NGQPGPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPG 250 260 270 280 290 300 620 630 640 650 660 670 pF1KB7 PFWSTA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAG : . .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :. XP_016 ERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV-- 310 320 330 340 350 360 680 690 700 710 720 730 pF1KB7 PQGPKGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGF : : ::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::. XP_016 P-GLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGL 370 380 390 400 410 740 750 760 770 780 790 pF1KB7 AGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP-- :.:: .:::: : :. :.:: .:. : :: .: :. :.: : : ::..: XP_016 PGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIG 420 430 440 450 460 470 800 810 820 830 840 pF1KB7 ----PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPP ::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: : XP_016 DMGFPGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLP 480 490 500 510 520 530 850 860 870 880 890 900 pF1KB7 GPPGTP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFD : ::.: : : .. . . :: ::::: : ::: : :: :::: :: XP_016 GYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG----- 540 550 560 570 580 910 920 930 940 950 pF1KB7 FLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPG : : : : :. : ::.:.:: :. : . :: :: ::: : ::. : XP_016 -LPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSG 590 600 610 620 630 640 960 970 980 990 1000 pF1KB7 PKGES----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTIS ::.. : :.:: :::.: ::. :. : :::::::: ::: :. :::. . XP_016 QKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-G 650 660 670 680 690 700 1010 1020 1030 1040 pF1KB7 VPGP------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI----- ::: ::: :::: ::. :. .: . . .. : . . : : XP_016 RPGPTGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRP 710 720 730 740 750 760 1050 1060 1070 1080 1090 1100 pF1KB7 -FVAEQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHP . . . . . :: .. . .: : ..: . . :: .: : : XP_016 GLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSG 770 780 790 800 810 1110 1120 1130 1140 1150 1160 pF1KB7 TARPWRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA- . ..: :.:: .: : : .. : :. ::.::. :. : . .. XP_016 QSIIIKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGG 820 830 840 850 860 870 1170 1180 1190 1200 1210 1220 pF1KB7 -LNSPLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVN ..: :. : :: : XP_016 RKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTL 880 890 900 910 920 930 >>NP_203699 (OMIM: 301050,303630) collagen alpha-5(IV) c (1691 aa) initn: 3059 init1: 930 opt: 1895 Z-score: 709.4 bits: 144.0 E(85289): 8.9e-33 Smith-Waterman score: 2110; 38.8% identity (53.2% similar) in 1063 aa overlap (229-1183:442-1444) 200 210 220 230 240 250 pF1KB7 PGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD-GASGDSG----S :.. : . : : . :. ::.: . NP_203 GPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQ 420 430 440 450 460 470 260 270 280 290 300 310 pF1KB7 GL-GDARELLREETGAALK--PRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGA :. :: . . :.... : :. : . :: :: ... : . ... : NP_203 GVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP---GSLGFPGQKGEKGQAGATGPKGL 480 490 500 510 520 320 330 340 350 360 pF1KB7 QTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGE---PGVPGPPGRAGPPGS---PCLPG .::. .. . :: :: . :.::.::: ::.:: :: : ::. : ::: NP_203 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 530 540 550 560 570 580 370 380 390 pF1KB7 P---------------------PGLPCPVSPLGPAG--P-------ALQTV---PGPQGP : :::: ..:.:: : : ..: : :: : NP_203 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI 590 600 610 620 630 640 400 410 420 430 440 pF1KB7 PGPPGRDGT----PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDPGVGE ::: : : ::. : ::.::.:: ::: : : :: :: : ::. : ::.: NP_203 PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGL 650 660 670 680 690 700 450 460 470 480 490 500 pF1KB7 RGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGE :::::.: :: ::: . : : . :. ::::::: :: :: NP_203 PGPPGPKGFPGIPGPP-----------GAPGTPGRI-------GLEGPPGPPGFPGPKGE 710 720 730 740 750 510 520 530 540 550 560 pF1KB7 PGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAP :: :.. . ::: :::: : :: : :.::::::::: : : : ::..: : : NP_203 PG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP 760 770 780 790 800 570 580 590 600 610 620 pF1KB7 GHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGGPFWS : : : :: :..: : : ::: : :: : :: : :: : :.: . : : : NP_203 GPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPGERGS 810 820 830 840 850 860 630 640 650 660 670 pF1KB7 TA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAGPQGP . .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :. : : NP_203 PGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV--P-GL 870 880 890 900 910 920 680 690 700 710 720 730 pF1KB7 KGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFP ::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::. :.: NP_203 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGLPGIP 930 940 950 960 970 740 750 760 770 780 790 pF1KB7 GPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP------ : .:::: : :. :.:: .:. : :: .: :. :.: : : ::..: NP_203 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIGDMGF 980 990 1000 1010 1020 1030 800 810 820 830 840 850 pF1KB7 PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPG ::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: :: :: NP_203 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLPGYPG 1040 1050 1060 1070 1080 1090 860 870 880 890 900 pF1KB7 TP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQL .: : : .. . . :: ::::: : ::: : :: :::: :: : NP_203 NPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG------LPG 1100 1110 1120 1130 1140 910 920 930 940 950 pF1KB7 EAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPGPKGE : : : :. : ::.:.:: :. : . :: :: ::: : ::. : ::. NP_203 EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGD 1150 1160 1170 1180 1190 1200 960 970 980 990 1000 pF1KB7 S----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTISVPGP . : :.:: :::.: ::. :. : :::::::: ::: :. :::. . ::: NP_203 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-GRPGP 1210 1220 1230 1240 1250 1260 1010 1020 1030 1040 1050 pF1KB7 ------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI------FVA ::: :::: ::. :. .: . . .. : . . : : . . NP_203 TGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG 1270 1280 1290 1300 1310 1320 1060 1070 1080 1090 1100 1110 pF1KB7 EQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARP . . . :: .. . .: : ..: . . :: .: : : . NP_203 MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSGQSII 1330 1340 1350 1360 1370 1120 1130 1140 1150 1160 1170 pF1KB7 WRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA--LNS ..: :.:: .: : : .. : :. ::.::. :. : . .. .. NP_203 IKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGGRKGD 1380 1390 1400 1410 1420 1430 1180 1190 1200 1210 1220 1230 pF1KB7 PLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDE : :. : :: : NP_203 PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYE 1440 1450 1460 1470 1480 1490 >-- initn: 791 init1: 435 opt: 1108 Z-score: 424.1 bits: 91.2 E(85289): 6.9e-17 Smith-Waterman score: 1241; 43.8% identity (54.2% similar) in 504 aa overlap (501-992:19-439) 480 490 500 510 520 pF1KB7 MEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGP----AGLPGVPG : :.:.. .. . :: .:. : : NP_203 MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKG 10 20 30 40 530 540 550 560 570 580 pF1KB7 REGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAG ..: ::. : :: :: :: ::::: ::::. : : :: :: .: :: : : :: : NP_203 ERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPG 50 60 70 80 90 100 590 600 610 620 630 640 pF1KB7 APGPAGPPGPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPG- :: : ::: : :: : :: : : .:: ::::.::.::.:: NP_203 MPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPG--------LQGPPGPPGIPGMKGEPGS 110 120 130 140 150 160 650 660 670 680 690 700 pF1KB7 --VPGLPGAKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLP . .::: ::. : : ::. :::: :: :: :: : : ::: NP_203 IIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPG----------P-------PGLM 170 180 190 200 710 720 730 740 750 760 pF1KB7 GPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKG ::::::: .:::.: :. .: :: : ::. : .: : :: .:. NP_203 GPPGPPG--------------LPGPKGNMGL-NFQGPKGEKGEQGLQGPPGPPGQISEQK 210 220 230 240 770 780 790 800 810 820 pF1KB7 EPGSIFSPDGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEK .: .. ::: .: :: :::::: :: .: :: :: : .: :::. NP_203 RPIDV---------EFQKGDQGLPGDRGPPGP---PGIRGP---PGPPG--GEKGEKGEQ 250 260 270 280 290 830 840 850 860 870 880 pF1KB7 GEPGDASLGFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKG :::: :: :: : : :: :: : : :: ::. : : :: NP_203 GEPGK-------RGKPGKDGENGQPGIPGLP-------------GDPGYPGEPGRDGEKG 300 310 320 330 890 900 910 920 930 940 pF1KB7 AKGEVGPPGPPGQ-FPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPG ::..::::::: .: . ::. : : :.::::: :: : : :::::: NP_203 QKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPG--LPGPPG 340 350 360 370 380 950 960 970 980 990 pF1KB7 PP--GPRGYPGIPGPKGESIRGQPGPPGPQ--GPPGIGYEGRQGPPGPPGPPGPPSFPGP :: : ::.:: .:. .:. :::: . ::::. .:. : :: :::::: NP_203 AAVMGPPGPPGFPGERGQ--KGDEGPPGISIPGPPGL--DGQPGAPGLPGPPGPAGPHIP 390 400 410 420 430 440 1000 1010 1020 1030 1040 1050 pF1KB7 HRQTISVPGPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELY NP_203 PSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP 450 460 470 480 490 500 >>XP_011529151 (OMIM: 301050,303630) PREDICTED: collagen (1696 aa) initn: 3059 init1: 930 opt: 1895 Z-score: 709.4 bits: 144.0 E(85289): 8.9e-33 Smith-Waterman score: 2110; 38.8% identity (53.2% similar) in 1063 aa overlap (229-1183:447-1449) 200 210 220 230 240 250 pF1KB7 PGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCLDEEGDDSD-GASGDSG----S :.. : . : : . :. ::.: . XP_011 GPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQ 420 430 440 450 460 470 260 270 280 290 300 310 pF1KB7 GL-GDARELLREETGAALK--PRLPAPPPVTTPPLAGGSSTEDSRSEEVEEQTTVASLGA :. :: . . :.... : :. : . :: :: ... : . ... : XP_011 GVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPP---GSLGFPGQKGEKGQAGATGPKGL 480 490 500 510 520 530 320 330 340 350 360 pF1KB7 QTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGE---PGVPGPPGRAGPPGS---PCLPG .::. .. . :: :: . :.::.::: ::.:: :: : ::. : ::: XP_011 PGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPG 540 550 560 570 580 590 370 380 390 pF1KB7 P---------------------PGLPCPVSPLGPAG--P-------ALQTV---PGPQGP : :::: ..:.:: : : ..: : :: : XP_011 PKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGI 600 610 620 630 640 650 400 410 420 430 440 pF1KB7 PGPPGRDGT----PGRDGEPGDPGEDGK---PGDTGPQGFPGTPGDVGPKGDKGDPGVGE ::: : : ::. : ::.::.:: ::: : : :: :: : ::. : ::.: XP_011 PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGL 660 670 680 690 700 710 450 460 470 480 490 500 pF1KB7 RGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFGGDLEALRGPRGFPGPPGPPGVPGLPGE :::::.: :: ::: . : : . :. ::::::: :: :: XP_011 PGPPGPKGFPGIPGPP-----------GAPGTPGRI-------GLEGPPGPPGFPGPKGE 720 730 740 750 510 520 530 540 550 560 pF1KB7 PGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLPGPPGPPGREGPPGRTGQKGSLGEAGAP :: :.. . ::: :::: : :: : :.::::::::: : : : ::..: : : XP_011 PG-FALPGP--PGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQP 760 770 780 790 800 810 570 580 590 600 610 620 pF1KB7 GHKGSKGAPGPAGARGESGLAGAPGPAGPPGPPGPPGPPG-PGLPAGFDDMEGSGGPFWS : : : :: :..: : : ::: : :: : :: : :: : :.: . : : : XP_011 GPMGPPGLPG-IGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLD-VPGPPGERGS 820 830 840 850 860 630 640 650 660 670 pF1KB7 TA-RSADGPQGPPGLPGLKGDPGVPGLPGAKGEVGADGVPGFPG---LPGREGIAGPQGP . .: :: :::: ::: : :. :.::.:::.: : :: :: .::: :. : : XP_011 PGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPPGPLGIPGRSGV--P-GL 870 880 890 900 910 920 680 690 700 710 720 730 pF1KB7 KGDRGSRGEKGDPGKDGV-GQPGLPGPPGPPGPVVYVSEQDGSVLSVPGPEGRPGFAGFP ::: : .:. : :: : :. : :: ::::::. : ..:. : .:.::. :.: XP_011 KGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPM------DPNLLGSKGEKGEPGLPGIP 930 940 950 960 970 980 740 750 760 770 780 790 pF1KB7 GPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPDGGALGPAQKGAKGEPGFRGP------ : .:::: : :. :.:: .:. : :: .: :. :.: : : ::..: XP_011 GVSGPKGYQGLPGDPGQPGLSGQPGLPGPP-GPKGNPGLPGQPGLIGPPGLKGTIGDMGF 990 1000 1010 1020 1030 800 810 820 830 840 850 pF1KB7 PGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRGMPGPPGPPGPPGPPG ::: : : : : ::.:: ::. : ::.::.:: .:. :. :.::: : :: :: :: XP_011 PGPQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSI--GLPGLPGPKGEPGLPGYPG 1040 1050 1060 1070 1080 1090 860 870 880 890 900 pF1KB7 TP-----VYDSNVFAESSRPGP---PGLPGNQGPPGPKGAKGEVGPPGPPGQFPFDFLQL .: : : .. . . :: ::::: : ::: : :: :::: :: : XP_011 NPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPG------LPG 1100 1110 1120 1130 1140 1150 910 920 930 940 950 pF1KB7 EAEMKGEKGDRGDAGQKGERGEPGGGGFFGSS----LPGPPG--PPGPRGYPGIPGPKGE : : : :. : ::.:.:: :. : . :: :: ::: : ::. : ::. XP_011 EPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGD 1160 1170 1180 1190 1200 1210 960 970 980 990 1000 pF1KB7 S----IRGQPGPPGPQGPPGI-GYEGRQGPPGPPGPPGP----PSF-PGPHRQTISVPGP . : :.:: :::.: ::. :. : :::::::: ::: :. :::. . ::: XP_011 GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP-GRPGP 1220 1230 1240 1250 1260 1270 1010 1020 1030 1040 1050 pF1KB7 ------PGPPGPPGPPGTMGASSGVRLWATRQAMLG----QVHEVPEGWLI------FVA ::: :::: ::. :. .: . . .. : . . : : . . XP_011 TGFQGLPGPEGPPGLPGN-GGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNG 1280 1290 1300 1310 1320 1060 1070 1080 1090 1100 1110 pF1KB7 EQEELYVRVQNGFRKVQLEARTPLPRGTDNEVAALQPPVVQLHDSNPYPRREHPHPTARP . . . :: .. . .: : ..: . . :: .: : : . XP_011 MKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPP-------GP-PGLPGPSGQSII 1330 1340 1350 1360 1370 1380 1120 1130 1140 1150 1160 1170 pF1KB7 WRADDILASPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHSHRDFQPVLHLVA--LNS ..: :.:: .: : : .. : :. ::.::. :. : . .. .. XP_011 IKGD---AGPPGIPGQPGLKGLPGPQGPQGL-PG-PTGPPGDPGRNGLPGFDGAGGRKGD 1390 1400 1410 1420 1430 1180 1190 1200 1210 1220 1230 pF1KB7 PLSGGMRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDE : :. : :: : XP_011 PGLPGQPGTRGLDGPPGPDGLQGPPGPPGTSSVAHGFLITRHSQTTDAPQCPQGTLQVYE 1440 1450 1460 1470 1480 1490 >-- initn: 791 init1: 435 opt: 1108 Z-score: 424.1 bits: 91.2 E(85289): 7e-17 Smith-Waterman score: 1238; 44.4% identity (53.4% similar) in 496 aa overlap (505-992:39-444) 480 490 500 510 520 530 pF1KB7 GFGGDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFP :: . : . : : : :: :: ::.: XP_011 ENRDWEGFCYSTSAYWKNLYDGLLACYGCSPGS-KCDCSGIKGEKGERGFPGLEGHPGLP 10 20 30 40 50 60 540 550 560 570 580 590 pF1KB7 GLPGPPGPPGREGPPGRTGQKGSLGEAGAPGHKGSKGAPGPAGARGESGLAGAPGPAGPP :.::: ::::: ::::. : : :: :: .: :: : : :: : :: : : XP_011 GFPGP------EGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAP 70 80 90 100 110 120 600 610 620 630 640 650 pF1KB7 GPPGPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGPPGLPGLKGDPG---VPGLPG :: : :: : :: : : .:: ::::.::.::.:: . .::: XP_011 GPQGIPGCNGTKGERGFPGSPGFPG--------LQGPPGPPGIPGMKGEPGSIIMSSLPG 130 140 150 160 170 660 670 680 690 700 710 pF1KB7 AKGEVGADGVPGFPGLPGREGIAGPQGPKGDRGSRGEKGDPGKDGVGQPGLPGPPGPPGP ::. : : ::. :::: :: :: :: : : ::: ::::::: XP_011 PKGNPGYPGPPGIQGLPGPTGIPGPIGPPG----------P-------PGLMGPPGPPG- 180 190 200 210 720 730 740 750 760 770 pF1KB7 VVYVSEQDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSP .:::.: :. .: :: : ::. : .: : :: .:. .: .. XP_011 -------------LPGPKGNMGL-NFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDV--- 220 230 240 250 780 790 800 810 820 830 pF1KB7 DGGALGPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASL ::: .: :: :::::: :: .: :: :: : .: :::.:::: XP_011 ------EFQKGDQGLPGDRGPPGP---PGIRGP---PGPPG--GEKGEKGEQGEPGK--- 260 270 280 290 300 840 850 860 870 880 890 pF1KB7 GFGMRGMPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPP :: :: : : :: :: : : :: ::. : : :: ::..::: XP_011 ----RGKPGKDGENGQPGIPGLP-------------GDPGYPGEPGRDGEKGQKGDTGPP 310 320 330 340 900 910 920 930 940 pF1KB7 GPPGQ-FPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPP--GPRG :::: .: . ::. : : :.::::: :: : : :::::: :: : XP_011 GPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPG--LPGPPGAAVMGPPG 350 360 370 380 390 400 950 960 970 980 990 1000 pF1KB7 YPGIPGPKGESIRGQPGPPGPQ--GPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVP ::.:: .:. .:. :::: . ::::. .:. : :: :::::: XP_011 PPGFPGERGQ--KGDEGPPGISIPGPPGL--DGQPGAPGLPGPPGPAGPHIPPSDEICEP 410 420 430 440 450 1010 1020 1030 1040 1050 1060 pF1KB7 GPPGPPGPPGPPGTMGASSGVRLWATRQAMLGQVHEVPEGWLIFVAEQEELYVRVQNGFR XP_011 GPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQ 460 470 480 490 500 510 1336 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:46:35 2016 done: Sun Nov 6 20:46:38 2016 Total Scan time: 21.670 Total Display time: 0.560 Function used was FASTA [36.3.4 Apr, 2011]