FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1288, 902 aa 1>>>pF1KE1288 902 - 902 aa - 902 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.1619+/-0.000927; mu= 7.6930+/- 0.056 mean_var=130.1462+/-25.836, 0's: 0 Z-trim(109.5): 21 B-trim: 4 in 1/50 Lambda= 0.112424 statistics sampled from 10907 (10920) to 10907 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.335), width: 16 Scan time: 3.850 The best scores are: opt bits E(32554) CCDS677.1 ZZZ3 gene_id:26009|Hs108|chr1 ( 903) 6080 997.9 0 CCDS76172.1 ZZZ3 gene_id:26009|Hs108|chr1 ( 409) 2757 458.9 8.9e-129 >>CCDS677.1 ZZZ3 gene_id:26009|Hs108|chr1 (903 aa) initn: 6078 init1: 3949 opt: 6080 Z-score: 5332.6 bits: 997.9 E(32554): 0 Smith-Waterman score: 6080; 99.9% identity (99.9% similar) in 903 aa overlap (1-902:1-903) 10 20 30 40 50 60 pF1KE1 MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG 490 500 510 520 530 540 550 560 570 580 590 pF1KE1 FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDK-GL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: CCDS67 FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGL 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE1 PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE1 KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNL 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE1 YIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 YIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDE 730 740 750 760 770 780 780 790 800 810 820 830 pF1KE1 SIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 SIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD 790 800 810 820 830 840 840 850 860 870 880 890 pF1KE1 CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS67 CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFP 850 860 870 880 890 900 900 pF1KE1 ANR ::: CCDS67 ANR >>CCDS76172.1 ZZZ3 gene_id:26009|Hs108|chr1 (409 aa) initn: 2755 init1: 2143 opt: 2757 Z-score: 2425.4 bits: 458.9 E(32554): 8.9e-129 Smith-Waterman score: 2757; 99.8% identity (99.8% similar) in 401 aa overlap (503-902:9-409) 480 490 500 510 520 530 pF1KE1 ASQHITEEEDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQR :::::::::::::::::::::::::::::: CCDS76 MIDLWLYSYQRLLQTIAVLEAQRSQAVQDLESLGRHQR 10 20 30 540 550 560 570 580 590 pF1KE1 EALKNPIGFVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 EALKNPIGFVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVK 40 50 60 70 80 90 600 610 620 630 640 650 pF1KE1 LVFDK-GLPARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFN ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 LVFDKVGLPARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFN 100 110 120 130 140 150 660 670 680 690 700 710 pF1KE1 QLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIP 160 170 180 190 200 210 720 730 740 750 760 770 pF1KE1 VPGRTPNLYIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VPGRTPNLYIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTA 220 230 240 250 260 270 780 790 800 810 820 830 pF1KE1 VEDASDDESIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VEDASDDESIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQ 280 290 300 310 320 330 840 850 860 870 880 890 pF1KE1 GVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 GVRWHCQDCPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYN 340 350 360 370 380 390 900 pF1KE1 YLDPNYFPANR ::::::::::: CCDS76 YLDPNYFPANR 400 902 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:05:06 2016 done: Sun Nov 6 21:05:07 2016 Total Scan time: 3.850 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]