FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6914, 225 aa 1>>>pF1KB6914 225 - 225 aa - 225 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7199+/-0.000826; mu= 11.3796+/- 0.049 mean_var=64.9885+/-12.774, 0's: 0 Z-trim(106.8): 14 B-trim: 0 in 0/51 Lambda= 0.159095 statistics sampled from 9209 (9219) to 9209 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.283), width: 16 Scan time: 2.040 The best scores are: opt bits E(32554) CCDS2321.1 MOB4 gene_id:25843|Hs108|chr2 ( 225) 1546 363.4 6.6e-101 CCDS63079.1 MOB4 gene_id:100529241|Hs108|chr2 ( 261) 1437 338.4 2.6e-93 CCDS2322.1 MOB4 gene_id:25843|Hs108|chr2 ( 193) 1322 312.0 1.7e-85 CCDS46480.1 MOB4 gene_id:25843|Hs108|chr2 ( 204) 1275 301.2 3.2e-82 >>CCDS2321.1 MOB4 gene_id:25843|Hs108|chr2 (225 aa) initn: 1546 init1: 1546 opt: 1546 Z-score: 1925.0 bits: 363.4 E(32554): 6.6e-101 Smith-Waterman score: 1546; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225) 10 20 30 40 50 60 pF1KB6 MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 AIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 AIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDE 130 140 150 160 170 180 190 200 210 220 pF1KB6 YENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA ::::::::::::::::::::::::::::::::::::::::::::: CCDS23 YENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA 190 200 210 220 >>CCDS63079.1 MOB4 gene_id:100529241|Hs108|chr2 (261 aa) initn: 1437 init1: 1437 opt: 1437 Z-score: 1788.8 bits: 338.4 E(32554): 2.6e-93 Smith-Waterman score: 1437; 98.6% identity (100.0% similar) in 210 aa overlap (16-225:52-261) 10 20 30 40 pF1KB6 MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQ :.:..::::::::::::::::::::::::: CCDS63 AAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKDFYNWPDESFDEMDSTLAVQQYIQQ 30 40 50 60 70 80 50 60 70 80 90 100 pF1KB6 NIRADCSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 NIRADCSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQ 90 100 110 120 130 140 110 120 130 140 150 160 pF1KB6 WIFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 WIFLCAAHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYR 150 160 170 180 190 200 170 180 190 200 210 220 pF1KB6 IFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 IFSHAYFHHRQIFDEYENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA 210 220 230 240 250 260 >>CCDS2322.1 MOB4 gene_id:25843|Hs108|chr2 (193 aa) initn: 1322 init1: 1322 opt: 1322 Z-score: 1648.3 bits: 312.0 E(32554): 1.7e-85 Smith-Waterman score: 1322; 100.0% identity (100.0% similar) in 193 aa overlap (33-225:1-193) 10 20 30 40 50 60 pF1KB6 MAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEPPE :::::::::::::::::::::::::::::: CCDS23 MDSTLAVQQYIQQNIRADCSNIDKILEPPE 10 20 30 70 80 90 100 110 120 pF1KB6 GQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECPAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 GQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECPAI 40 50 60 70 80 90 130 140 150 160 170 180 pF1KB6 DYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 DYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDEYE 100 110 120 130 140 150 190 200 210 220 pF1KB6 NETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA ::::::::::::::::::::::::::::::::::::::::::: CCDS23 NETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA 160 170 180 190 >>CCDS46480.1 MOB4 gene_id:25843|Hs108|chr2 (204 aa) initn: 1275 init1: 1275 opt: 1275 Z-score: 1589.6 bits: 301.2 E(32554): 3.2e-82 Smith-Waterman score: 1343; 90.7% identity (90.7% similar) in 225 aa overlap (1-225:1-204) 10 20 30 40 50 60 pF1KB6 MVMAEGTAVLRRNRPGTKAQDFYNWPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEP :::::::::::::::::::: ::::::::::::::::::: CCDS46 MVMAEGTAVLRRNRPGTKAQ---------------------YIQQNIRADCSNIDKILEP 10 20 30 70 80 90 100 110 120 pF1KB6 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQWIFLCAAHKTPKECP 40 50 60 70 80 90 130 140 150 160 170 180 pF1KB6 AIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AIDYTRHTLDGAACLLNSNKYFPSRVSIKESSVAKLGSVCRRIYRIFSHAYFHHRQIFDE 100 110 120 130 140 150 190 200 210 220 pF1KB6 YENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA ::::::::::::::::::::::::::::::::::::::::::::: CCDS46 YENETFLCHRFTKFVMKYNLMSKDNLIVPILEEEVQNSVSGESEA 160 170 180 190 200 225 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:07:48 2016 done: Sun Nov 6 21:07:49 2016 Total Scan time: 2.040 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]