FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1876, 398 aa 1>>>pF1KE1876 398 - 398 aa - 398 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7227+/-0.000923; mu= 14.8810+/- 0.056 mean_var=68.0335+/-13.524, 0's: 0 Z-trim(105.1): 20 B-trim: 0 in 0/50 Lambda= 0.155494 statistics sampled from 8236 (8240) to 8236 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.253), width: 16 Scan time: 2.410 The best scores are: opt bits E(32554) CCDS1120.1 DAP3 gene_id:7818|Hs108|chr1 ( 398) 2691 612.7 1.8e-175 CCDS55647.1 DAP3 gene_id:7818|Hs108|chr1 ( 357) 2328 531.3 5.4e-151 CCDS55646.1 DAP3 gene_id:7818|Hs108|chr1 ( 364) 2081 475.9 2.6e-134 >>CCDS1120.1 DAP3 gene_id:7818|Hs108|chr1 (398 aa) initn: 2691 init1: 2691 opt: 2691 Z-score: 3263.7 bits: 612.7 E(32554): 1.8e-175 Smith-Waterman score: 2691; 100.0% identity (100.0% similar) in 398 aa overlap (1-398:1-398) 10 20 30 40 50 60 pF1KE1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 310 320 330 340 350 360 370 380 390 pF1KE1 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL :::::::::::::::::::::::::::::::::::::: CCDS11 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 370 380 390 >>CCDS55647.1 DAP3 gene_id:7818|Hs108|chr1 (357 aa) initn: 2400 init1: 2321 opt: 2328 Z-score: 2824.3 bits: 531.3 E(32554): 5.4e-151 Smith-Waterman score: 2328; 98.0% identity (98.6% similar) in 353 aa overlap (46-398:8-357) 20 30 40 50 60 70 pF1KE1 LDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHGDQHEGQHYNISPQDL : ::: .. ::::::::::::::::::: CCDS55 MMLKGITRLISRIHK---AKHGDQHEGQHYNISPQDL 10 20 30 80 90 100 110 120 130 pF1KE1 ETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKT 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE1 LSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTN 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE1 ERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 ERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGM 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE1 FHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 FHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGS 220 230 240 250 260 270 320 330 340 350 360 370 pF1KE1 LFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEE 280 290 300 310 320 330 380 390 pF1KE1 GKKELLFLSNANPSLLERHCAYL ::::::::::::::::::::::: CCDS55 GKKELLFLSNANPSLLERHCAYL 340 350 >>CCDS55646.1 DAP3 gene_id:7818|Hs108|chr1 (364 aa) initn: 2093 init1: 2070 opt: 2081 Z-score: 2524.7 bits: 475.9 E(32554): 2.6e-134 Smith-Waterman score: 2362; 91.5% identity (91.5% similar) in 398 aa overlap (1-398:1-364) 10 20 30 40 50 60 pF1KE1 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDP---- 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 DQHEGQHYNISPQDLETVFPHGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYP :::::::::::::::::::::::::::::: CCDS55 ------------------------------VKTFSEACLMVRKPALELLHYLKNTSFAYP 60 70 80 130 140 150 160 170 180 pF1KE1 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 AIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQ 90 100 110 120 130 140 190 200 210 220 230 240 pF1KE1 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 PLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV 150 160 170 180 190 200 250 260 270 280 290 300 pF1KE1 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKND 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 WHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYY 270 280 290 300 310 320 370 380 390 pF1KE1 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL :::::::::::::::::::::::::::::::::::::: CCDS55 LENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL 330 340 350 360 398 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:08:23 2016 done: Sun Nov 6 21:08:23 2016 Total Scan time: 2.410 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]