FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1954, 510 aa 1>>>pF1KE1954 510 - 510 aa - 510 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8703+/-0.00105; mu= 15.5253+/- 0.063 mean_var=69.7455+/-13.968, 0's: 0 Z-trim(103.8): 12 B-trim: 0 in 0/49 Lambda= 0.153573 statistics sampled from 7565 (7570) to 7565 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.585), E-opt: 0.2 (0.233), width: 16 Scan time: 2.610 The best scores are: opt bits E(32554) CCDS1617.1 FH gene_id:2271|Hs108|chr1 ( 510) 3300 740.5 1e-213 >>CCDS1617.1 FH gene_id:2271|Hs108|chr1 (510 aa) initn: 3300 init1: 3300 opt: 3300 Z-score: 3950.4 bits: 740.5 E(32554): 1e-213 Smith-Waterman score: 3300; 100.0% identity (100.0% similar) in 510 aa overlap (1-510:1-510) 10 20 30 40 50 60 pF1KE1 MYRALRLLARSRPLVRAPAAALASAPGLGGAAVPSFWPPNAARMASQNSFRIEYDTFGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MYRALRLLARSRPLVRAPAAALASAPGLGGAAVPSFWPPNAARMASQNSFRIEYDTFGEL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 KVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYGLDPKIANAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 MKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 VNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 PLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 TGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 NEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 NEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 RLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 RLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGS 430 440 450 460 470 480 490 500 510 pF1KE1 TLKETAIELGYLTAEQFDEWVKPKDMLGPK :::::::::::::::::::::::::::::: CCDS16 TLKETAIELGYLTAEQFDEWVKPKDMLGPK 490 500 510 510 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:20:38 2016 done: Sun Nov 6 21:20:39 2016 Total Scan time: 2.610 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]