FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1736, 242 aa 1>>>pF1KE1736 242 - 242 aa - 242 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0798+/-0.000731; mu= 15.4162+/- 0.044 mean_var=61.2872+/-12.324, 0's: 0 Z-trim(108.6): 7 B-trim: 443 in 1/50 Lambda= 0.163828 statistics sampled from 10301 (10302) to 10301 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.316), width: 16 Scan time: 2.130 The best scores are: opt bits E(32554) CCDS7895.1 APIP gene_id:51074|Hs108|chr11 ( 242) 1700 409.9 7.7e-115 >>CCDS7895.1 APIP gene_id:51074|Hs108|chr11 (242 aa) initn: 1700 init1: 1700 opt: 1700 Z-score: 2175.2 bits: 409.9 E(32554): 7.7e-115 Smith-Waterman score: 1700; 100.0% identity (100.0% similar) in 242 aa overlap (1-242:1-242) 10 20 30 40 50 60 pF1KE1 MSGCDAREGDCCSRRCGAQDKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 MSGCDAREGDCCSRRCGAQDKEHPRYLIPELCKQFYHLGWVTGTGGGISLKHGDEIYIAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 SGVQKERIQPEDMFVCDINEKDISGPSPSKKLKKSQCTPLFMNAYTMRGAGAVIHTHSKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 AVMATLLFPGREFKITHQEMIKGIKKCTSGGYYRYDDMLVVPIIENTPEEKDLKDRMAHA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 MNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 MNEYPDSCAVLVRRHGVYVWGETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGENG 190 200 210 220 230 240 pF1KE1 IV :: CCDS78 IV 242 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:24:51 2016 done: Sun Nov 6 21:24:52 2016 Total Scan time: 2.130 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]