FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8350, 266 aa 1>>>pF1KB8350 266 - 266 aa - 266 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1676+/-0.000912; mu= 7.8053+/- 0.054 mean_var=221.9222+/-46.411, 0's: 0 Z-trim(113.7): 841 B-trim: 0 in 0/53 Lambda= 0.086094 statistics sampled from 13322 (14294) to 13322 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.787), E-opt: 0.2 (0.439), width: 16 Scan time: 2.690 The best scores are: opt bits E(32554) CCDS1694.1 OSR1 gene_id:130497|Hs108|chr2 ( 266) 1856 242.7 2e-64 CCDS47902.1 OSR2 gene_id:116039|Hs108|chr8 ( 276) 1230 165.0 5.2e-41 CCDS47901.1 OSR2 gene_id:116039|Hs108|chr8 ( 312) 1224 164.3 9.3e-41 CCDS69520.1 OSR2 gene_id:116039|Hs108|chr8 ( 433) 1224 164.5 1.1e-40 >>CCDS1694.1 OSR1 gene_id:130497|Hs108|chr2 (266 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 1270.2 bits: 242.7 E(32554): 2e-64 Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 266 aa overlap (1-266:1-266) 10 20 30 40 50 60 pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 AMHLPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPALKTKPRFDFA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 NLALAATQEDPAKLGRGEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF 190 200 210 220 230 240 250 260 pF1KB8 CQSRTLAVHKTLHSQVKELKTSKIKC :::::::::::::::::::::::::: CCDS16 CQSRTLAVHKTLHSQVKELKTSKIKC 250 260 >>CCDS47902.1 OSR2 gene_id:116039|Hs108|chr8 (276 aa) initn: 1230 init1: 711 opt: 1230 Z-score: 849.8 bits: 165.0 E(32554): 5.2e-41 Smith-Waterman score: 1230; 66.8% identity (84.3% similar) in 274 aa overlap (1-266:1-265) 10 20 30 40 50 60 pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP ::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...:::::: CCDS47 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP 10 20 30 40 50 70 80 90 100 110 pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD .: . ::..... .....:::::: .::.:. :...:: : .::: : .:::: CCDS47 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE :::::.::::::: :.: . : ::: .:: .::.:..::.::::::::::: CCDS47 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 180 190 200 210 220 230 240 250 260 pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKE--LKTSKIKC ::::::::::::::::::: :.. .: :: CCDS47 ECGKGFCQSRTLAVHKTLHMQTSSPTAASSAAKCSGETVICGGTA 240 250 260 270 >>CCDS47901.1 OSR2 gene_id:116039|Hs108|chr8 (312 aa) initn: 1230 init1: 711 opt: 1224 Z-score: 845.2 bits: 164.3 E(32554): 9.3e-41 Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:1-252) 10 20 30 40 50 60 pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGLPTVPSDHLPNLYGFSALHAVHLHQWTLGYP ::::.::::.:.:::::::::::::::: .:.. ::: .:::.::....:...:::::: CCDS47 MGSKALPAPIPLHPSLQLTNYSFLQAVNTFPAT-VDHLQGLYGLSAVQTMHMNHWTLGYP 10 20 30 40 50 70 80 90 100 110 pF1KB8 AMH-LPRSSFSKVPGTVSSLVDARFQLPAFPWFPHVIQPKPEITAGGSVPAL-KTKPRFD .: . ::..... .....:::::: .::.:. :...:: : .::: : .:::: CCDS47 NVHEITRSTITEM-AAAQGLVDARFPFPALPFTTHLFHPKQGAIAH-VLPALHKDRPRFD 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 FANLALAATQEDPAKLGR----GEGPGSPAGGLGALLDVTKLSPEKKPTRGRLPSKTKKE :::::.::::::: :.: . : ::: .:: .::.:..::.::::::::::: CCDS47 FANLAVAATQEDPPKMGDLSKLSPGLGSPISGL------SKLTPDRKPSRGRLPSKTKKE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB8 FVCKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 180 190 200 210 220 230 240 250 260 pF1KB8 ECGKGFCQSRTLAVHKTLHSQVKELKTSKIKC ::::::::::::::::::: : CCDS47 ECGKGFCQSRTLAVHKTLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGK 240 250 260 270 280 290 >>CCDS69520.1 OSR2 gene_id:116039|Hs108|chr8 (433 aa) initn: 1230 init1: 711 opt: 1224 Z-score: 843.6 bits: 164.5 E(32554): 1.1e-40 Smith-Waterman score: 1224; 69.0% identity (86.2% similar) in 261 aa overlap (1-255:122-373) 10 20 30 pF1KB8 MGSKTLPAPVPIHPSLQLTNYSFLQAVNGL ::::.::::.:.:::::::::::::::: . CCDS69 HWVFVGAPRPPASDSWKKGLVPSAPPASRKMGSKALPAPIPLHPSLQLTNYSFLQAVNTF 100 110 120 130 140 150 40 50 60 70 80 pF1KB8 PTVPSDHLPNLYGFSALHAVHLHQWTLGYPAMH-LPRSSFSKVPGTVSSLVDARFQLPAF :.. ::: .:::.::....:...:::::: .: . ::..... .....:::::: .::. CCDS69 PAT-VDHLQGLYGLSAVQTMHMNHWTLGYPNVHEITRSTITEM-AAAQGLVDARFPFPAL 160 170 180 190 200 90 100 110 120 130 140 pF1KB8 PWFPHVIQPKPEITAGGSVPAL-KTKPRFDFANLALAATQEDPAKLGR----GEGPGSPA :. :...:: : .::: : .:::::::::.::::::: :.: . : ::: CCDS69 PFTTHLFHPKQGAIAH-VLPALHKDRPRFDFANLAVAATQEDPPKMGDLSKLSPGLGSPI 210 220 230 240 250 260 150 160 170 180 190 200 pF1KB8 GGLGALLDVTKLSPEKKPTRGRLPSKTKKEFVCKFCGRHFTKSYNLLIHERTHTDERPYT .:: .::.:..::.::::::::::::.:::::::::::::::::::::::::::: CCDS69 SGL------SKLTPDRKPSRGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYT 270 280 290 300 310 320 210 220 230 240 250 260 pF1KB8 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHSQVKELKTSKI ::::::::::::::::::::::::::::::::::::::::::::::::: : CCDS69 CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQESPHKCPTC 330 340 350 360 370 380 pF1KB8 KC CCDS69 GRTFNQRSNLKTHLLTHTDIKPYSCEQCGKVFRRNCDLRRHSLTHTPRQDF 390 400 410 420 430 266 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:26:45 2016 done: Sun Nov 6 21:26:45 2016 Total Scan time: 2.690 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]