(Linear) (Six-base) MAPSORT of: KIEE0303.seq Check: 3854 from: 1 to: 1788 KIEE0303.orf With 182 enzymes: SgfI * April 24, 2009 13:12 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 54 1788 Size: 54 1734 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 824 1788 Size: 824 964 AfeI AGC'GCT Cuts at: 0 994 1788 Size: 994 794 AleI CACnn'nnGTG Cuts at: 0 482 553 631 1788 Size: 482 71 78 1157 Fragments arranged by size: 1157 482 78 71 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1310 1788 Size: 1310 478 AlwNI CAG_nnn'CTG Cuts at: 0 1477 1788 Size: 1477 311 ApaLI G'TGCA_C Cuts at: 0 1248 1788 Size: 1248 540 AseI AT'TA_AT Cuts at: 0 739 1788 Size: 739 1049 AvaI C'yCGr_G Cuts at: 0 1103 1788 Size: 1103 685 BamHI G'GATC_C Cuts at: 0 1656 1788 Size: 1656 132 BanI G'GyrC_C Cuts at: 0 55 661 1788 Size: 55 606 1127 Fragments arranged by size: 1127 606 55 BanII G_rGCy'C Cuts at: 0 130 1788 Size: 130 1658 BbvCI CC'TCA_GC Cuts at: 0 11 1788 Size: 11 1777 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 318 352 1788 Size: 318 34 1436 Fragments arranged by size: 1436 318 34 BclI T'GATC_A Cuts at: 0 1113 1788 Size: 1113 675 BfrBI ATG'CAT Cuts at: 0 1775 1788 Size: 1775 13 BlpI GC'TnA_GC Cuts at: 0 899 1788 Size: 899 889 Bme1580I G_kGCm'C Cuts at: 0 58 664 1252 1700 1788 Size: 58 606 588 448 88 Fragments arranged by size: 606 588 448 88 58 BmgBI CAC'GTC Cuts at: 0 573 1788 Size: 573 1215 BmrI ACTGGGnnnn_n' Cuts at: 0 307 1788 Size: 307 1481 BmtI G_CTAG'C Cuts at: 0 1082 1788 Size: 1082 706 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1055 1788 Size: 1055 733 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 1234 1545 1788 Size: 1234 311 243 Fragments arranged by size: 1234 311 243 Bpu10I CC'TnA_GC Cuts at: 0 11 989 1467 1788 Size: 11 978 478 321 Fragments arranged by size: 978 478 321 11 BsaWI w'CCGG_w Cuts at: 0 222 1121 1788 Size: 222 899 667 Fragments arranged by size: 899 667 222 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 568 598 1788 Size: 568 30 1190 Fragments arranged by size: 1190 568 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 49 1788 Size: 49 1739 BseYI C'CCAG_C Cuts at: 0 903 1788 Size: 903 885 BsiEI CG_ry'CG Cuts at: 0 234 567 1788 Size: 234 333 1221 Fragments arranged by size: 1221 333 234 BsiHKAI G_wGCw'C Cuts at: 0 130 503 1252 1788 Size: 130 373 749 536 Fragments arranged by size: 749 536 373 130 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1281 1563 1653 1788 Size: 1281 282 90 135 Fragments arranged by size: 1281 282 135 90 Bsp1286I G_dGCh'C Cuts at: 0 58 130 503 664 1252 1700 1788 Size: 58 72 373 161 588 448 88 Fragments arranged by size: 588 448 373 161 88 72 58 BspEI T'CCGG_A Cuts at: 0 222 1121 1788 Size: 222 899 667 Fragments arranged by size: 899 667 222 BspHI T'CATG_A Cuts at: 0 191 368 1788 Size: 191 177 1420 Fragments arranged by size: 1420 191 177 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 54 1788 Size: 54 1734 BsrDI GCAATG_nn' Cuts at: 0 416 487 1067 1788 Size: 416 71 580 721 Fragments arranged by size: 721 580 416 71 BssSI C'ACGA_G Cuts at: 0 123 1788 Size: 123 1665 BstAPI GCAn_nnn'nTGC Cuts at: 0 1309 1788 Size: 1309 479 BstBI TT'CG_AA Cuts at: 0 1489 1788 Size: 1489 299 BstXI CCAn_nnnn'nTGG Cuts at: 0 633 1788 Size: 633 1155 BstYI r'GATC_y Cuts at: 0 210 1656 1788 Size: 210 1446 132 Fragments arranged by size: 1446 210 132 BtgI C'CryG_G Cuts at: 0 1056 1280 1652 1788 Size: 1056 224 372 136 Fragments arranged by size: 1056 372 224 136 BtsI GCAGTG_nn' Cuts at: 0 501 626 1691 1788 Size: 501 125 1065 97 Fragments arranged by size: 1065 501 125 97 DrdI GACnn_nn'nnGTC Cuts at: 0 238 1788 Size: 238 1550 EaeI y'GGCC_r Cuts at: 0 80 132 564 638 1763 1788 Size: 80 52 432 74 1125 25 Fragments arranged by size: 1125 432 80 74 52 25 EagI C'GGCC_G Cuts at: 0 564 1788 Size: 564 1224 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 19 1396 1788 Size: 19 1377 392 Fragments arranged by size: 1377 392 19 EcoICRI GAG'CTC Cuts at: 0 128 1788 Size: 128 1660 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 824 1234 1545 1788 Size: 824 410 311 243 Fragments arranged by size: 824 410 311 243 EcoO109I rG'GnC_Cy Cuts at: 0 1401 1788 Size: 1401 387 FspI TGC'GCA Cuts at: 0 1641 1788 Size: 1641 147 HaeII r_GCGC'y Cuts at: 0 528 996 1788 Size: 528 468 792 Fragments arranged by size: 792 528 468 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 154 186 227 259 367 399 819 851 Size: 154 32 41 32 108 32 420 32 Cuts at: 851 855 887 1261 1293 1788 Size: 4 32 374 32 495 Fragments arranged by size: 495 420 374 154 108 41 32 32 32 32 32 32 4 HincII GTy'rAC Cuts at: 0 810 1788 Size: 810 978 MscI TGG'CCA Cuts at: 0 82 640 1788 Size: 82 558 1148 Fragments arranged by size: 1148 558 82 MslI CAynn'nnrTG Cuts at: 0 172 482 553 631 1594 1788 Size: 172 310 71 78 963 194 Fragments arranged by size: 963 310 194 172 78 71 MspA1I CmG'CkG Cuts at: 0 1474 1788 Size: 1474 314 NcoI C'CATG_G Cuts at: 0 1652 1788 Size: 1652 136 NheI G'CTAG_C Cuts at: 0 1078 1788 Size: 1078 710 NsiI A_TGCA'T Cuts at: 0 1777 1788 Size: 1777 11 NspI r_CATG'y Cuts at: 0 119 311 697 884 1291 1779 1788 Size: 119 192 386 187 407 488 9 Fragments arranged by size: 488 407 386 192 187 119 9 PfoI T'CCnGG_A Cuts at: 0 29 1788 Size: 29 1759 PpuMI rG'GwC_Cy Cuts at: 0 1401 1788 Size: 1401 387 PspXI vC'TCGA_Gb Cuts at: 0 1103 1788 Size: 1103 685 PvuII CAG'CTG Cuts at: 0 1474 1788 Size: 1474 314 SacI G_AGCT'C Cuts at: 0 130 1788 Size: 130 1658 ScaI AGT'ACT Cuts at: 0 334 1788 Size: 334 1454 SexAI A'CCwGG_T Cuts at: 0 946 1788 Size: 946 842 SfcI C'TryA_G Cuts at: 0 429 1788 Size: 429 1359 SmlI C'TyrA_G Cuts at: 0 1103 1788 Size: 1103 685 SphI G_CATG'C Cuts at: 0 697 884 1291 1788 Size: 697 187 407 497 Fragments arranged by size: 697 497 407 187 StuI AGG'CCT Cuts at: 0 1133 1788 Size: 1133 655 StyI C'CwwG_G Cuts at: 0 1313 1397 1652 1788 Size: 1313 84 255 136 Fragments arranged by size: 1313 255 136 84 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 248 530 1788 Size: 248 282 1258 Fragments arranged by size: 1258 282 248 TatI w'GTAC_w Cuts at: 0 332 1788 Size: 332 1456 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 568 600 1439 1471 1788 Size: 568 32 839 32 317 Fragments arranged by size: 839 568 317 32 32 Tth111I GACn'n_nGTC Cuts at: 0 1426 1788 Size: 1426 362 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 633 1536 1788 Size: 633 903 252 Fragments arranged by size: 903 633 252 XhoI C'TCGA_G Cuts at: 0 1103 1788 Size: 1103 685 XmnI GAAnn'nnTTC Cuts at: 0 99 1788 Size: 99 1689 Enzymes that do cut: AarI AcuI AfeI AleI AlfI AlwNI ApaLI AseI AvaI BamHI BanI BanII BbvCI BcgI BclI BfrBI BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI BsmBI Bsp1286I BspEI BspHI BspMI BsrDI BssSI BstAPI BstBI BstXI BstYI BtgI BtsI DrdI EaeI EagI EciI EcoICRI Eco57MI EcoO109I FspI HaeII Hin4I HincII MscI MslI MspA1I NcoI NheI NsiI NspI PfoI PpuMI PspXI PvuII SacI ScaI SexAI SfcI SmlI SphI StuI StyI TaqII TatI TstI Tth111I XcmI XhoI XmnI Enzymes that do not cut: AatII AccI Acc65I AclI AflII AflIII AgeI AhdI AloI ApaI ApoI AscI AsiSI AvrII BaeI BbeI BbsI BciVI BglI BglII BpuEI BsaI BsaAI BsaBI BsaHI BsgI BsiWI BsmI BsrBI BsrFI BsrGI BssHII BstEII BstZ17I Bsu36I BtgZI ClaI CspCI DraI DraIII EarI EcoNI EcoRI EcoRV FalI FseI FspAI HindIII HpaI KasI KpnI MfeI MluI MmeI NaeI NarI NdeI NgoMIV NotI NruI PacI PasI PciI PflMI PmeI PmlI PpiI PshAI PsiI PspOMI PsrI PstI PvuI RsrII SacII SalI SanDI SapI SbfI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SrfI SspI SwaI XbaI XmaI ZraI