Result of FASTA (ccds) for
pFN21AE1818
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1818, 278 aa
1>>>pF1KE1818 278 - 278 aa - 278 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1671+/-0.000693; mu= 16.4461+/- 0.042
mean_var=69.0516+/-14.033, 0's: 0 Z-trim(110.7): 47 B-trim: 248 in 1/50
Lambda= 0.154343
statistics sampled from 11728 (11775) to 11728 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.733), E-opt: 0.2 (0.362), width: 16
Scan time: 2.490
The best scores are: opt bits E(32554)
CCDS1176.1 CD1B gene_id:910|Hs108|chr1 ( 333) 1688 384.3 6.1e-107
CCDS1175.1 CD1C gene_id:911|Hs108|chr1 ( 333) 1019 235.4 4.3e-62
CCDS1174.1 CD1A gene_id:909|Hs108|chr1 ( 327) 944 218.6 4.5e-57
CCDS41419.1 CD1E gene_id:913|Hs108|chr1 ( 321) 910 211.1 8.4e-55
CCDS41421.1 CD1E gene_id:913|Hs108|chr1 ( 290) 899 208.6 4.2e-54
CCDS41418.1 CD1E gene_id:913|Hs108|chr1 ( 376) 899 208.7 5.2e-54
CCDS41417.1 CD1E gene_id:913|Hs108|chr1 ( 388) 899 208.7 5.3e-54
CCDS1173.1 CD1D gene_id:912|Hs108|chr1 ( 335) 780 182.1 4.5e-46
CCDS53387.1 CD1E gene_id:913|Hs108|chr1 ( 289) 548 130.4 1.4e-30
CCDS53384.1 CD1E gene_id:913|Hs108|chr1 ( 231) 334 82.7 2.6e-16
CCDS53386.1 CD1E gene_id:913|Hs108|chr1 ( 286) 334 82.8 3.1e-16
CCDS53385.1 CD1E gene_id:913|Hs108|chr1 ( 298) 334 82.8 3.2e-16
CCDS53388.1 CD1E gene_id:913|Hs108|chr1 ( 144) 316 78.6 2.9e-15
CCDS53389.1 CD1E gene_id:913|Hs108|chr1 ( 132) 311 77.4 5.9e-15
CCDS41422.1 CD1E gene_id:913|Hs108|chr1 ( 101) 300 74.9 2.6e-14
CCDS41420.1 CD1E gene_id:913|Hs108|chr1 ( 187) 300 75.1 4.2e-14
CCDS53390.1 CD1E gene_id:913|Hs108|chr1 ( 199) 300 75.1 4.4e-14
>>CCDS1176.1 CD1B gene_id:910|Hs108|chr1 (333 aa)
initn: 1903 init1: 1676 opt: 1688 Z-score: 2033.4 bits: 384.3 E(32554): 6.1e-107
Smith-Waterman score: 1688; 91.9% identity (94.4% similar) in 270 aa overlap (1-270:1-264)
10 20 30 40 50 60
pF1KE1 MLLLPFQLLAVLFPGGNSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MLLLPFQLLAVLFPGGNSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 YETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMR
190 200 210 220 230 240
250 260 270
pF1KE1 GNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
:. . :. :. :.:. ::.:
CCDS11 GEQEQQGTQ-LGDILPNANWT-----WYLRATLDVADGEAAGLSCRVKHSSLEGQDIILY
250 260 270 280 290
>>CCDS1175.1 CD1C gene_id:911|Hs108|chr1 (333 aa)
initn: 1097 init1: 656 opt: 1019 Z-score: 1228.3 bits: 235.4 E(32554): 4.3e-62
Smith-Waterman score: 1019; 59.0% identity (80.7% similar) in 249 aa overlap (1-248:1-249)
10 20 30 40 50 60
pF1KE1 MLLLPFQLLAVLFPGGNSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDS
::.: : :::.:.:::.. : : .:::::: ::.:..::. :::::::.:: :::::
CCDS11 MLFLQFLLLALLLPGGDNADASQEHVSFHVIQIFSFVNQSWARGQGSGWLDELQTHGWDS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGC
.::: :::. :::::::..:...:: .:: :.::..::.:: :.. :::::.: :::
CCDS11 ESGTIIFLHNWSKGNFSNEELSDLELLFRFYLFGLTREIQDHASQDYSKYPFEVQVKAGC
70 80 90 100 110 120
130 140 150 160 170
pF1KE1 ELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALII-QYQGIMETVRIL
::::: . .:.. :..:::.:: .:.. :::: :: ::. : :. ::.:. ::: :
CCDS11 ELHSGKSPEGFFQVAFNGLDLLSFQNTTWVPSPGCGSLAQSVCHLLNHQYEGVTETVYNL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE1 LYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWM
. ::::.:::.:.::: ..:::.::::::: :: : :.: ::::.:::::::::: ::
CCDS11 IRSTCPRFLLGLLDAGKMYVHRQVRPEAWLSSRPSLGSGQLLLVCHASGFYPKPVWVTWM
190 200 210 220 230 240
240 250 260 270
pF1KE1 RGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
:.. ..:.
CCDS11 RNEQEQLGTKHGDILPNADGTWYLQVILEVASEEPAGLSCRVRHSSLGGQDIILYWGHHF
250 260 270 280 290 300
>>CCDS1174.1 CD1A gene_id:909|Hs108|chr1 (327 aa)
initn: 992 init1: 911 opt: 944 Z-score: 1138.2 bits: 218.6 E(32554): 4.5e-57
Smith-Waterman score: 944; 52.6% identity (73.3% similar) in 270 aa overlap (1-270:1-263)
10 20 30 40 50 60
pF1KE1 MLLLPFQLLAVLFPGGNSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDS
::.: . ::::: :: .. ... : :::: .:: : .: :. ::::.::: : :::
CCDS11 MLFLLLPLLAVL-PGDGNADGLKEPLSFHVTWIASFYNHSWKQNLVSGWLSDLQTHTWDS
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 DSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGC
.:.: .:: :::.::::..: ::: .::. . . .. .: ..:..:::::: .::
CCDS11 NSSTIVFLCPWSRGNFSNEEWKELETLFRIRTIRSFEGIRRYAHELQFEYPFEIQVTGGC
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 ELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILL
::::: . :::. : : ::.: .: : .: : .:. :..:: .. : : . .. ::
CCDS11 ELHSGKVSGSFLQLAYQGSDFVSFQNNSWLPYPVAGNMAKHFCKVLNQNQHENDITHNLL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 YETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMR
.::::..::.:.:::: :::::::::::: :::::::.:::::::::::::::::::::
CCDS11 SDTCPRFILGLLDAGKAHLQRQVKPEAWLSHGPSPGPGHLQLVCHVSGFYPKPVWVMWMR
180 190 200 210 220 230
250 260 270
pF1KE1 GNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
:. . :. . :.:: . ::.:
CCDS11 GEQEQQGTQR-GDILPS-----ADGTWYLRATLEVAAGEAADLSCRVKHSSLEGQDIVLY
240 250 260 270 280 290
>>CCDS41419.1 CD1E gene_id:913|Hs108|chr1 (321 aa)
initn: 915 init1: 500 opt: 910 Z-score: 1097.4 bits: 211.1 E(32554): 8.4e-55
Smith-Waterman score: 910; 49.6% identity (73.8% similar) in 282 aa overlap (1-273:1-278)
10 20 30 40 50
pF1KE1 MLLLPFQLLAVLFPGGNSE--HAFQG-------PTSFHVIQTSSFTNSTWAQTQGSGWLD
:::: . . .. :: :. .:.:. ::...:::::.: .::...:::::
CCDS41 MLLLFLLFEGLCCPGENTAAPQALQSYHLAAEEQLSFRMLQTSSFANHSWAHSEGSGWLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYP
::: ::::. :: ::::::.:::: .:. .:. .:..:. .: . :: ::.::..::
CCDS41 DLQTHGWDTVLGTIRFLKPWSHGNFSKQELKNLQSLFQLYFHSFIQIVQASAGQFQLEYP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQG
:::: .:::.... :: : : :::: .. : ::: .: :::..: .. .:
CCDS41 FEIQILAGCRMNAPQI---FLNMAYQGSDFLSFQGISWEPSPGAGIRAQNICKVLNRYLD
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 IMETVRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYP
: : .. :: .::::.: :...::...:.:.:::::::: ::::::::::::::::::::
CCDS41 IKEILQSLLGHTCPRFLAGLMEAGESELKRKVKPEAWLSCGPSPGPGRLQLVCHVSGFYP
180 190 200 210 220 230
240 250 260 270
pF1KE1 KPVWVMWMRGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
::::::::::. :: :.. . : :..: .. ....:
CCDS41 KPVWVMWMRGG-YSIFLILICLTVIVTLVILVVVDSRLKKQSPVFLMGANTQDTKNSRHQ
240 250 260 270 280 290
CCDS41 FCLAQVSWIKNRVLKKWKTRLNQLW
300 310 320
>>CCDS41421.1 CD1E gene_id:913|Hs108|chr1 (290 aa)
initn: 915 init1: 500 opt: 899 Z-score: 1084.7 bits: 208.6 E(32554): 4.2e-54
Smith-Waterman score: 899; 52.1% identity (75.1% similar) in 257 aa overlap (1-248:1-254)
10 20 30 40 50
pF1KE1 MLLLPFQLLAVLFPGGNSE--HAFQG-------PTSFHVIQTSSFTNSTWAQTQGSGWLD
:::: . . .. :: :. .:.:. ::...:::::.: .::...:::::
CCDS41 MLLLFLLFEGLCCPGENTAAPQALQSYHLAAEEQLSFRMLQTSSFANHSWAHSEGSGWLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYP
::: ::::. :: ::::::.:::: .:. .:. .:..:. .: . :: ::.::..::
CCDS41 DLQTHGWDTVLGTIRFLKPWSHGNFSKQELKNLQSLFQLYFHSFIQIVQASAGQFQLEYP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQG
:::: .:::.... :: : : :::: .. : ::: .: :::..: .. .:
CCDS41 FEIQILAGCRMNAPQI---FLNMAYQGSDFLSFQGISWEPSPGAGIRAQNICKVLNRYLD
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 IMETVRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYP
: : .. :: .::::.: :...::...:.:.:::::::: ::::::::::::::::::::
CCDS41 IKEILQSLLGHTCPRFLAGLMEAGESELKRKVKPEAWLSCGPSPGPGRLQLVCHVSGFYP
180 190 200 210 220 230
240 250 260 270
pF1KE1 KPVWVMWMRGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
::::::::::. . :.
CCDS41 KPVWVMWMRGEQEQRGTQRGDVLPNADETWWIFHLSHPDLFDCDSYPGHIGCS
240 250 260 270 280 290
>>CCDS41418.1 CD1E gene_id:913|Hs108|chr1 (376 aa)
initn: 915 init1: 500 opt: 899 Z-score: 1083.1 bits: 208.7 E(32554): 5.2e-54
Smith-Waterman score: 899; 52.1% identity (75.1% similar) in 257 aa overlap (1-248:1-254)
10 20 30 40 50
pF1KE1 MLLLPFQLLAVLFPGGNSE--HAFQG-------PTSFHVIQTSSFTNSTWAQTQGSGWLD
:::: . . .. :: :. .:.:. ::...:::::.: .::...:::::
CCDS41 MLLLFLLFEGLCCPGENTAAPQALQSYHLAAEEQLSFRMLQTSSFANHSWAHSEGSGWLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYP
::: ::::. :: ::::::.:::: .:. .:. .:..:. .: . :: ::.::..::
CCDS41 DLQTHGWDTVLGTIRFLKPWSHGNFSKQELKNLQSLFQLYFHSFIQIVQASAGQFQLEYP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQG
:::: .:::.... :: : : :::: .. : ::: .: :::..: .. .:
CCDS41 FEIQILAGCRMNAPQI---FLNMAYQGSDFLSFQGISWEPSPGAGIRAQNICKVLNRYLD
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 IMETVRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYP
: : .. :: .::::.: :...::...:.:.:::::::: ::::::::::::::::::::
CCDS41 IKEILQSLLGHTCPRFLAGLMEAGESELKRKVKPEAWLSCGPSPGPGRLQLVCHVSGFYP
180 190 200 210 220 230
240 250 260 270
pF1KE1 KPVWVMWMRGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
::::::::::. . :.
CCDS41 KPVWVMWMRGEQEQRGTQRGDVLPNADETWYLRATLDVAAGEAAGLSCRVKHSSLGGHDL
240 250 260 270 280 290
>>CCDS41417.1 CD1E gene_id:913|Hs108|chr1 (388 aa)
initn: 915 init1: 500 opt: 899 Z-score: 1082.9 bits: 208.7 E(32554): 5.3e-54
Smith-Waterman score: 899; 52.1% identity (75.1% similar) in 257 aa overlap (1-248:1-254)
10 20 30 40 50
pF1KE1 MLLLPFQLLAVLFPGGNSE--HAFQG-------PTSFHVIQTSSFTNSTWAQTQGSGWLD
:::: . . .. :: :. .:.:. ::...:::::.: .::...:::::
CCDS41 MLLLFLLFEGLCCPGENTAAPQALQSYHLAAEEQLSFRMLQTSSFANHSWAHSEGSGWLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYP
::: ::::. :: ::::::.:::: .:. .:. .:..:. .: . :: ::.::..::
CCDS41 DLQTHGWDTVLGTIRFLKPWSHGNFSKQELKNLQSLFQLYFHSFIQIVQASAGQFQLEYP
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE1 FEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQG
:::: .:::.... :: : : :::: .. : ::: .: :::..: .. .:
CCDS41 FEIQILAGCRMNAPQI---FLNMAYQGSDFLSFQGISWEPSPGAGIRAQNICKVLNRYLD
130 140 150 160 170
180 190 200 210 220 230
pF1KE1 IMETVRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYP
: : .. :: .::::.: :...::...:.:.:::::::: ::::::::::::::::::::
CCDS41 IKEILQSLLGHTCPRFLAGLMEAGESELKRKVKPEAWLSCGPSPGPGRLQLVCHVSGFYP
180 190 200 210 220 230
240 250 260 270
pF1KE1 KPVWVMWMRGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
::::::::::. . :.
CCDS41 KPVWVMWMRGEQEQRGTQRGDVLPNADETWYLRATLDVAAGEAAGLSCRVKHSSLGGHDL
240 250 260 270 280 290
>>CCDS1173.1 CD1D gene_id:912|Hs108|chr1 (335 aa)
initn: 755 init1: 755 opt: 780 Z-score: 940.6 bits: 182.1 E(32554): 4.5e-46
Smith-Waterman score: 780; 45.2% identity (71.9% similar) in 270 aa overlap (1-270:1-264)
10 20 30 40 50 60
pF1KE1 MLLLPFQLLAVLFPGGNSEHAFQGPTSFHVIQTSSFTNSTWAQTQGSGWLDDLQIHGWDS
: : : :: .:. . .: .. : .. .: :::.::.:..:.: .:: .:: :.:..
CCDS11 MGCLLFLLLWALLQAWGSAEVPQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 DSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGC
:: :. :::::.:.:::.. :..::::: .:.:.:..:: ....::.:.: :::
CCDS11 DSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGC
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 ELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILL
:.: :.: .:.. :. : :.:: ...: :. :. .. .. : . :::. ::
CCDS11 EVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMR
:::... :.:..::..:..::::.:::: ::::::::: ::::::::::::::: :::
CCDS11 NGTCPQFVSGLLESGKSELKKQVKPKAWLSRGPSPGPGRLLLVCHVSGFYPKPVWVKWMR
190 200 210 220 230 240
250 260 270
pF1KE1 GNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
:. . :. :. .: ::.:
CCDS11 GEQEQQGTQ------PGDILPNADETWYLRATLDVVAGEAAGLSCRVKHSSLEGQDIVLY
250 260 270 280 290
>>CCDS53387.1 CD1E gene_id:913|Hs108|chr1 (289 aa)
initn: 580 init1: 500 opt: 548 Z-score: 662.4 bits: 130.4 E(32554): 1.4e-30
Smith-Waterman score: 548; 57.2% identity (77.5% similar) in 138 aa overlap (111-248:21-155)
90 100 110 120 130 140
pF1KE1 VAELEEIFRVYIFGFAREVQDFAGDFQMKYPFEIQGIAGCELHSGGAIVSFLRGALGGLD
::::: .:::.... :: : : :
CCDS53 MLLLFLLFEGLCCPGENTADPFEIQILAGCRMNAPQI---FLNMAYQGSD
10 20 30 40
150 160 170 180 190 200
pF1KE1 FLSVKNASCVPSPEGGSRAQKFCALIIQYQGIMETVRILLYETCPRYLLGVLNAGKADLQ
::: .. : ::: .: :::..: .. .: : : .. :: .::::.: :...::...:.
CCDS53 FLSFQGISWEPSPGAGIRAQNICKVLNRYLDIKEILQSLLGHTCPRFLAGLMEAGESELK
50 60 70 80 90 100
210 220 230 240 250 260
pF1KE1 RQVKPEAWLSSGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGNPTSIGSIVLAIIVPSLLL
:.:::::::: ::::::::::::::::::::::::::::::. . :.
CCDS53 RKVKPEAWLSCGPSPGPGRLQLVCHVSGFYPKPVWVMWMRGEQEQRGTQRGDVLPNADET
110 120 130 140 150 160
270
pF1KE1 LLCLALWYMRRRSYQNIP
CCDS53 WYLRATLDVAAGEAAGLSCRVKHSSLGGHDLIIHWGGYSIFLILICLTVIVTLVILVVVD
170 180 190 200 210 220
>>CCDS53384.1 CD1E gene_id:913|Hs108|chr1 (231 aa)
initn: 381 init1: 334 opt: 334 Z-score: 406.2 bits: 82.7 E(32554): 2.6e-16
Smith-Waterman score: 455; 34.8% identity (50.4% similar) in 282 aa overlap (1-273:1-188)
10 20 30 40 50
pF1KE1 MLLLPFQLLAVLFPGGNSE--HAFQG-------PTSFHVIQTSSFTNSTWAQTQGSGWLD
:::: . . .. :: :. .:.:. ::...:::::.: .::...:::::
CCDS53 MLLLFLLFEGLCCPGENTAAPQALQSYHLAAEEQLSFRMLQTSSFANHSWAHSEGSGWLG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 DLQIHGWDSDSGTAIFLKPWSKGNFSDKEVAELEEIFRVYIFGFAREVQDFAGDFQMKYP
::: ::::. :: ::::::.:::: .:. .:. .:..:. .: . :: ::.::.
CCDS53 DLQTHGWDTVLGTIRFLKPWSHGNFSKQELKNLQSLFQLYFHSFIQIVQASAGQFQL---
70 80 90 100 110
120 130 140 150 160 170
pF1KE1 FEIQGIAGCELHSGGAIVSFLRGALGGLDFLSVKNASCVPSPEGGSRAQKFCALIIQYQG
CCDS53 ------------------------------------------------------------
180 190 200 210 220 230
pF1KE1 IMETVRILLYETCPRYLLGVLNAGKADLQRQVKPEAWLSSGPSPGPGRLQLVCHVSGFYP
..::::::: ::::::::::::::::::::
CCDS53 ------------------------------ELKPEAWLSCGPSPGPGRLQLVCHVSGFYP
120 130 140
240 250 260 270
pF1KE1 KPVWVMWMRGNPTSIGSIVLAIIVPSLLLLLCLALWYMRRRSYQNIP
::::::::::. :: :.. . : :..: .. ....:
CCDS53 KPVWVMWMRGG-YSIFLILICLTVIVTLVILVVVDSRLKKQSPVFLMGANTQDTKNSRHQ
150 160 170 180 190 200
CCDS53 FCLAQVSWIKNRVLKKWKTRLNQLW
210 220 230
278 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:27:55 2016 done: Sun Nov 6 21:27:55 2016
Total Scan time: 2.490 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]