FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0263, 132 aa 1>>>pF1KE0263 132 - 132 aa - 132 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3917+/-0.00105; mu= 10.1463+/- 0.063 mean_var=57.3676+/-11.162, 0's: 0 Z-trim(102.3): 26 B-trim: 0 in 0/47 Lambda= 0.169333 statistics sampled from 6879 (6900) to 6879 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.212), width: 16 Scan time: 1.400 The best scores are: opt bits E(32554) CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 585 151.2 1.8e-37 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 583 150.7 2.5e-37 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 511 133.1 4.9e-32 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 496 129.4 6.6e-31 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 473 123.8 3.1e-29 CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 463 121.4 1.7e-28 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 442 116.3 7.2e-27 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 299 81.3 2e-16 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 283 77.4 3e-15 CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 278 76.2 6.8e-15 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 275 75.5 1.6e-14 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 267 73.5 4.4e-14 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 240 66.9 4.3e-12 CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 232 64.9 1.9e-11 CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 230 64.5 2.7e-11 CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 229 64.2 2.7e-11 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 585 init1: 585 opt: 585 Z-score: 786.3 bits: 151.2 E(32554): 1.8e-37 Smith-Waterman score: 585; 67.4% identity (90.2% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD : . :::::::::::::.:::: :::..:.:....:.:::: :: : ..::::::.:.. CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM :.::::::.::.::::::::.:: .::. ::. .::.: :::::::::.:. :::.:::: CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV ...: ::::::: CCDS62 KGVVCTRIYEKV 130 >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 602 init1: 567 opt: 583 Z-score: 783.7 bits: 150.7 E(32554): 2.5e-37 Smith-Waterman score: 583; 64.1% identity (91.6% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD : . :.:::::::::::.:::::.::.::.:..::..::.. :::.: ..::..::.:.. CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM :.::: ::.::::.:::.:::::::::..: ..::::: :: :::::: :.:.:::: : CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV ....:::.::. CCDS62 KGVTSTRVYERA 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 511 init1: 511 opt: 511 Z-score: 688.6 bits: 133.1 E(32554): 4.9e-32 Smith-Waterman score: 511; 55.7% identity (86.3% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD ::. ::::::::.:.::.:::: :::.::.:..:...:::. : .: ..:..:.:.:.. CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM :.:::::: ::::::::.::::: .::..:...:.::: :.:::. :...: :... CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV .. : :: ::: CCDS34 GTAVCTRTYEKEA 130 >>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 (140 aa) initn: 496 init1: 496 opt: 496 Z-score: 668.4 bits: 129.4 E(32554): 6.6e-31 Smith-Waterman score: 496; 57.6% identity (83.3% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD :.. . :::: .: :: ::::::::.. :.:... :.:::::::.:: ..::.:.: :.. CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM ..:::::::::.: : ..:.:: .::.. :.:.:: : :::::: ::.:: ::::: . CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV :... :: :::: CCDS47 NSVICTRTYEKVSSNSVSNS 130 140 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 473 init1: 473 opt: 473 Z-score: 638.4 bits: 123.8 E(32554): 3.1e-29 Smith-Waterman score: 473; 53.4% identity (86.3% similar) in 131 aa overlap (1-131:1-131) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD ::: : .::::..:.::..::: :::.::.:......:::: :: .: ..::: :.:.. CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM :.:::.:::::::::::.:. ::...:.. ...:.::: ::::.. :.: : :::. . CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV ...:..: ::: CCDS51 GDVVAVRHYEKA 130 >>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 (135 aa) initn: 463 init1: 463 opt: 463 Z-score: 625.1 bits: 121.4 E(32554): 1.7e-28 Smith-Waterman score: 463; 51.1% identity (84.0% similar) in 131 aa overlap (2-132:4-134) 10 20 30 40 50 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSF :. . : :.::.:..:..:::::::..: :.:....:: :. ::: .::.:::.. CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVEC . :..: :::.:.:::::.::.... .. .:.... :.: :::.:: ::. : :.:::: CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC 70 80 90 100 110 120 120 130 pF1KE0 KMNNIVSTRIYEKV :::.. ::::::: CCDS62 VMNNVTCTRIYEKVE 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 456 init1: 442 opt: 442 Z-score: 595.9 bits: 116.3 E(32554): 7.2e-27 Smith-Waterman score: 442; 56.0% identity (87.9% similar) in 116 aa overlap (1-116:1-116) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD ::: : .::::..:.::..::: :::.::.:......:::: :: .: ..::: :.:.. CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 TKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKM :.:::.:::::::::::.:. ::...:.. ...:.::: ::::.. :.: : :::. CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND 70 80 90 100 110 120 130 pF1KE0 NNIVSTRIYEKV CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 130 140 150 160 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 276 init1: 160 opt: 299 Z-score: 408.4 bits: 81.3 E(32554): 2e-16 Smith-Waterman score: 299; 39.7% identity (66.4% similar) in 131 aa overlap (5-129:4-134) 10 20 30 40 50 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMA--GLVKPTVTISVDGKMMTIRTESSF : ::::. :::::.. .: :::: :..: . :: : : :: .. :.: .. CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLENGSMIHVQKWL----GKETTIKRKIVDEKM . :.:.::.:: :.: :.:.:: .: : :: . :: . : : .: :....... CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL 60 70 80 90 100 110 120 130 pF1KE0 VVECKMNNIVSTRIYEKV .. ...: :::: CCDS10 ILTFGADDVVCTRIYVRE 120 130 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 242 init1: 141 opt: 283 Z-score: 387.3 bits: 77.4 E(32554): 3e-15 Smith-Waterman score: 283; 37.9% identity (68.2% similar) in 132 aa overlap (5-129:4-135) 10 20 30 40 50 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMA--GLVKPTVTISVDGKMMTIRTESSF : :.::.. :::::. .: :::: :..: . ::.: :. .: . :.: .. CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 QDTKISFKLGEEFDETTADNRKVKSTITLEN-GSMIHVQKWL---GKETTIKRKIV-DEK . :.:.::.::::.: :.:.: :: . :. ..:. :: : : .:. :... : . CCDS11 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE 60 70 80 90 100 110 120 130 pF1KE0 MVVECKMNNIVSTRIYEKV ... ...: ::.: CCDS11 LILTMTADDVVCTRVYVRE 120 130 >>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa) initn: 277 init1: 230 opt: 278 Z-score: 380.9 bits: 76.2 E(32554): 6.8e-15 Smith-Waterman score: 278; 38.6% identity (66.1% similar) in 127 aa overlap (7-131:7-133) 10 20 30 40 50 60 pF1KE0 MVEPFLGTWKLVSSENFEDYMKELGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQD ::: :.::.::: :: ::..::.:..: :.:: .: .: .::.:.::... CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 TKISFKLGEEFDETTA--DNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVEC ..::.:::::: . :::: :: . .: . .:: :. . : .:. .: CCDS10 YFVKFKVGEEFDEDNRGLDNRKCKSLVIWDNDRLTCIQKGEKKNRGWTHWIEGDKLHLEM 70 80 90 100 110 120 120 130 pF1KE0 KMNNIVSTRIYEKV .. : . ... CCDS10 FCEGQVCKQTFQRA 130 132 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Thu Nov 3 18:32:59 2016 done: Thu Nov 3 18:32:59 2016 Total Scan time: 1.400 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]