FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1792, 304 aa 1>>>pF1KE1792 304 - 304 aa - 304 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3356+/-0.000758; mu= 15.5735+/- 0.046 mean_var=65.9263+/-13.216, 0's: 0 Z-trim(107.9): 33 B-trim: 0 in 0/53 Lambda= 0.157959 statistics sampled from 9811 (9843) to 9811 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.688), E-opt: 0.2 (0.302), width: 16 Scan time: 1.960 The best scores are: opt bits E(32554) CCDS2294.1 TFPI gene_id:7035|Hs108|chr2 ( 304) 2143 496.9 7.8e-141 CCDS33349.1 TFPI gene_id:7035|Hs108|chr2 ( 251) 1471 343.7 8.3e-95 CCDS5632.1 TFPI2 gene_id:7980|Hs108|chr7 ( 235) 267 69.3 3.1e-12 >>CCDS2294.1 TFPI gene_id:7035|Hs108|chr2 (304 aa) initn: 2143 init1: 2143 opt: 2143 Z-score: 2641.9 bits: 496.9 E(32554): 7.8e-141 Smith-Waterman score: 2143; 100.0% identity (100.0% similar) in 304 aa overlap (1-304:1-304) 10 20 30 40 50 60 pF1KE1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 KCRPFKYSGCGGNENNFTSKQECLRACKKGFIQRISKGGLIKTKRKRKKQRVKIAYEEIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 KCRPFKYSGCGGNENNFTSKQECLRACKKGFIQRISKGGLIKTKRKRKKQRVKIAYEEIF 250 260 270 280 290 300 pF1KE1 VKNM :::: CCDS22 VKNM >>CCDS33349.1 TFPI gene_id:7035|Hs108|chr2 (251 aa) initn: 1471 init1: 1471 opt: 1471 Z-score: 1815.5 bits: 343.7 E(32554): 8.3e-95 Smith-Waterman score: 1471; 100.0% identity (100.0% similar) in 209 aa overlap (1-209:1-209) 10 20 30 40 50 60 pF1KE1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIG ::::::::::::::::::::::::::::: CCDS33 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFVTKEGTNDGWKNAAHIYQVFLNAFCIHASMF 190 200 210 220 230 240 >>CCDS5632.1 TFPI2 gene_id:7980|Hs108|chr7 (235 aa) initn: 702 init1: 258 opt: 267 Z-score: 333.1 bits: 69.3 E(32554): 3.1e-12 Smith-Waterman score: 478; 32.4% identity (52.3% similar) in 256 aa overlap (41-290:23-234) 20 30 40 50 60 70 pF1KE1 LWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRF :. : .: . : :::.:.. :. CCDS56 MDPARPLGLSILLLFLTEAALGDAAQEPTGNNAEICLLPLDYGPCRALLLRY 10 20 30 40 50 80 90 100 110 120 130 pF1KE1 FFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQEKPDFCFLEED ... .:..:..:.::::::: : : . : : : : .. : : :. . CCDS56 YYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWR-----------IEKVPKVCRLQVS 60 70 80 90 100 140 150 160 170 180 pF1KE1 -PGICRGYITRYFYNNQTKQCERFKYGGCLGNM--NNFETLEECKNICEDGPNGFQVDNY :.: .::.: .. ::.: ::: : : : : ..: CCDS56 VDDQCEGSTEKYFFNLSSMTCEKFFSGGCHRNRIENRFPDEATCMGFC------------ 110 120 130 140 190 200 210 220 230 240 pF1KE1 GTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKY .:. :.::. : .: :.::: :: .:.:.: : : : CCDS56 -----------APK--KIPSF--------CYSPKDEGLCSANVTRYYFNPRYRTCDAFTY 150 160 170 180 250 260 270 280 290 300 pF1KE1 SGCGGNENNFTSKQECLRACKKGFIQR--ISKGGLIKTKRK-RKKQRVKIAYEEIFVKNM .:::::.:::.:...: ::: :.. .. . : . . :: :::: CCDS56 TGCGGNDNNFVSREDCKRACAKALKKKKKMPKLRFASRIRKIRKKQF 190 200 210 220 230 304 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:28:25 2016 done: Sun Nov 6 21:28:26 2016 Total Scan time: 1.960 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]