FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1859, 379 aa 1>>>pF1KE1859 379 - 379 aa - 379 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9076+/-0.000836; mu= 8.0205+/- 0.051 mean_var=179.8982+/-36.403, 0's: 0 Z-trim(114.3): 3 B-trim: 863 in 1/51 Lambda= 0.095623 statistics sampled from 14851 (14853) to 14851 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.456), width: 16 Scan time: 1.620 The best scores are: opt bits E(32554) CCDS6140.1 FNTA gene_id:2339|Hs108|chr8 ( 379) 2596 369.6 2.5e-102 >>CCDS6140.1 FNTA gene_id:2339|Hs108|chr8 (379 aa) initn: 2596 init1: 2596 opt: 2596 Z-score: 1950.6 bits: 369.6 E(32554): 2.5e-102 Smith-Waterman score: 2596; 100.0% identity (100.0% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS61 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 310 320 330 340 350 360 370 pF1KE1 RSLQSKHSTENDSPTNVQQ ::::::::::::::::::: CCDS61 RSLQSKHSTENDSPTNVQQ 370 379 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:29:31 2016 done: Sun Nov 6 21:29:31 2016 Total Scan time: 1.620 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]