FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1232, 365 aa 1>>>pF1KE1232 365 - 365 aa - 365 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5617+/-0.000427; mu= 13.1177+/- 0.027 mean_var=382.9333+/-89.752, 0's: 0 Z-trim(118.9): 1412 B-trim: 0 in 0/52 Lambda= 0.065541 statistics sampled from 30315 (32313) to 30315 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.732), E-opt: 0.2 (0.379), width: 16 Scan time: 5.670 The best scores are: opt bits E(85289) NP_002088 (OMIM: 600860) transcription factor IIIA ( 365) 2580 258.3 2e-68 NP_001311076 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08 NP_001311079 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08 NP_001311073 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08 NP_001311069 (OMIM: 314995) zinc finger protein 41 ( 779) 469 59.3 3.4e-08 NP_700359 (OMIM: 314995) zinc finger protein 41 is ( 779) 469 59.3 3.4e-08 NP_009061 (OMIM: 314995) zinc finger protein 41 is ( 779) 469 59.3 3.4e-08 XP_016885306 (OMIM: 314995) PREDICTED: zinc finger ( 779) 469 59.3 3.4e-08 NP_001311084 (OMIM: 314995) zinc finger protein 41 ( 821) 469 59.4 3.4e-08 NP_001247415 (OMIM: 604086) zinc finger protein 15 ( 538) 461 58.3 4.8e-08 NP_003436 (OMIM: 604086) zinc finger protein 155 i ( 538) 461 58.3 4.8e-08 XP_005259272 (OMIM: 604086) PREDICTED: zinc finger ( 538) 461 58.3 4.8e-08 NP_932355 (OMIM: 604086) zinc finger protein 155 i ( 538) 461 58.3 4.8e-08 NP_001247416 (OMIM: 604086) zinc finger protein 15 ( 538) 461 58.3 4.8e-08 XP_011525580 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08 XP_016882737 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08 NP_001247417 (OMIM: 604086) zinc finger protein 15 ( 549) 461 58.3 4.9e-08 XP_011525581 (OMIM: 604086) PREDICTED: zinc finger ( 549) 461 58.3 4.9e-08 XP_016881642 (OMIM: 604750) PREDICTED: zinc finger ( 502) 457 57.8 6.1e-08 XP_016881641 (OMIM: 604750) PREDICTED: zinc finger ( 502) 457 57.8 6.1e-08 XP_016881640 (OMIM: 604750) PREDICTED: zinc finger ( 669) 457 58.1 6.9e-08 XP_016881639 (OMIM: 604750) PREDICTED: zinc finger ( 688) 457 58.1 7e-08 XP_006723037 (OMIM: 604750) PREDICTED: zinc finger ( 700) 457 58.1 7e-08 NP_006621 (OMIM: 604750) zinc finger protein 234 [ ( 700) 457 58.1 7e-08 XP_016881638 (OMIM: 604750) PREDICTED: zinc finger ( 700) 457 58.1 7e-08 NP_001138296 (OMIM: 604750) zinc finger protein 23 ( 700) 457 58.1 7e-08 NP_001243583 (OMIM: 603972) zinc finger protein 43 ( 744) 453 57.8 9.4e-08 NP_001243580 (OMIM: 603972) zinc finger protein 43 ( 744) 453 57.8 9.4e-08 XP_016873753 (OMIM: 602187) PREDICTED: zinc finger ( 489) 450 57.1 9.5e-08 NP_001243577 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08 XP_016882699 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882705 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 NP_001243578 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08 NP_001243579 (OMIM: 603972) zinc finger protein 43 ( 803) 453 57.8 9.7e-08 XP_016882698 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882697 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_011526559 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_011526561 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882701 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882696 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882704 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882703 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882702 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 XP_016882700 (OMIM: 603972) PREDICTED: zinc finger ( 803) 453 57.8 9.7e-08 NP_003414 (OMIM: 603972) zinc finger protein 43 is ( 809) 453 57.8 9.7e-08 NP_001243582 (OMIM: 603972) zinc finger protein 43 ( 818) 453 57.9 9.8e-08 XP_016873755 (OMIM: 602187) PREDICTED: zinc finger ( 530) 450 57.2 9.9e-08 XP_016873754 (OMIM: 602187) PREDICTED: zinc finger ( 530) 450 57.2 9.9e-08 NP_775802 (OMIM: 603982) zinc finger protein 100 [ ( 542) 450 57.2 1e-07 XP_016873756 (OMIM: 602187) PREDICTED: zinc finger ( 553) 450 57.2 1e-07 >>NP_002088 (OMIM: 600860) transcription factor IIIA [Ho (365 aa) initn: 2580 init1: 2580 opt: 2580 Z-score: 1349.5 bits: 258.3 E(85289): 2e-68 Smith-Waterman score: 2580; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:1-365) 10 20 30 40 50 60 pF1KE1 MDPPAVVAESVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MDPPAVVAESVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 LCKHTGERPFVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 FERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 FERKHENQQKQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEEILCEVCRKTFKRKDYLKQHMKTHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 RHAKAHEGYVCQKGCSFVAKTWTELLKHVRETHKEEILCEVCRKTFKRKDYLKQHMKTHA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PERDVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PERDVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 HDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 HDPDKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVA 310 320 330 340 350 360 pF1KE1 VLTLG ::::: NP_002 VLTLG >>NP_001311076 (OMIM: 314995) zinc finger protein 41 iso (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_001311079 (OMIM: 314995) zinc finger protein 41 iso (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_001311073 (OMIM: 314995) zinc finger protein 41 iso (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_001311069 (OMIM: 314995) zinc finger protein 41 iso (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_700359 (OMIM: 314995) zinc finger protein 41 isofor (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_700 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_700 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_700 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_700 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_700 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_700 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_009061 (OMIM: 314995) zinc finger protein 41 isofor (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_009 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_009 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_009 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_009 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_009 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_009 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>XP_016885306 (OMIM: 314995) PREDICTED: zinc finger pro (779 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.2 bits: 59.3 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:469-735) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. XP_016 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 440 450 460 470 480 490 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : XP_016 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 500 510 520 530 540 550 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : XP_016 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 560 570 580 590 600 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. XP_016 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 610 620 630 640 650 660 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. XP_016 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 670 680 690 700 710 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : XP_016 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 720 730 740 750 760 770 >>NP_001311084 (OMIM: 314995) zinc finger protein 41 iso (821 aa) initn: 225 init1: 122 opt: 469 Z-score: 268.0 bits: 59.4 E(85289): 3.4e-08 Smith-Waterman score: 551; 34.7% identity (60.1% similar) in 288 aa overlap (42-323:511-777) 20 30 40 50 60 70 pF1KE1 SSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERPFV :: ::. ...: .: .: ::::.:.. NP_001 YVCADCGKAFIQKSHFNTHQRIHTGEKPYECS--DCGKSFTKKSQLHVHQRIHTGEKPYI 490 500 510 520 530 80 90 100 110 120 130 pF1KE1 CDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQKQ : :::.: . .:. : :::::::..:: : . :. .::: :: .. : .. : NP_001 CTE--CGKVFTHRTNLTTHQKTHTGEKPYMCAE--CGKAFTDQSNLIKH-QKTHTGE-KP 540 550 560 570 580 590 140 150 160 170 180 pF1KE1 YICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG--- : :. : :.: ...::::: .: .: ..: . ::: : . : :. : . : : NP_001 YKCN--GCGKAFIWKSRLKIHQKSHIGERHYEC--KDCGKAFIQKSTLSVHQRIHTGEKP 600 610 620 630 640 190 200 210 220 230 240 pF1KE1 YVCQK-GCSFVAKTWTELLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER-DV ::: . : .:. :. ... : : .: .. : : : : .:. :. :.: :. :. .. NP_001 YVCPECGKAFIQKS--HFIAHHRIHTGEKPYECSDCGKCFTKKSQLRVHQKIHTGEKPNI 650 660 670 680 690 700 250 260 270 280 290 300 pF1KE1 CRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDPDK : ::...: :: .: ..: . .:. : . :::::. :. :. : : .. NP_001 C----AECGKAFTDRSNLITH-QKIHTREKPYEC--GDCGKTFTWKSRLNIHQKSHTGER 710 720 730 740 750 310 320 330 340 350 360 pF1KE1 KKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLTLG . : :. ... : NP_001 HYECSKCGKAFIQKATLSMHQIIHTGKKPYACTECQKAFTDRSNLIKHQKMHSGEKRYKA 760 770 780 790 800 810 >>NP_001247415 (OMIM: 604086) zinc finger protein 155 is (538 aa) initn: 486 init1: 123 opt: 461 Z-score: 265.4 bits: 58.3 E(85289): 4.8e-08 Smith-Waterman score: 528; 33.8% identity (58.8% similar) in 311 aa overlap (40-344:232-516) 10 20 30 40 50 60 pF1KE1 SVSSLTIADAFIAAGESSAPTPPRPALPRRFICSFPDCSANYSKAWKLDAHLCKHTGERP : : .:. ..:. :..: ::::.: NP_001 KLFMCDVCGKEFSQSSHLQTHQRVHTGEKPFKCE--QCGKGFSRRSALNVHRKLHTGEKP 210 220 230 240 250 70 80 90 100 110 120 pF1KE1 FVCDYEGCGKAFIRDYHLSRHILTHTGEKPFVCAANGCDQKFNTKSNLKKHFERKHENQQ ..: :.::::::.: .:..: ::::::: : . : . : .: ::.: : .. NP_001 YIC--EACGKAFIHDSQLKEHKRIHTGEKPFKC--DICGKTFYFRSRLKSH-SMVHTGE- 260 270 280 290 300 310 130 140 150 160 170 180 pF1KE1 KQYICSFEDCKKTFKKHQQLKIHQCQHTNEPLFKCTQEGCGKHFASPSKLKRHAKAHEG- : . : . : :.:.... :. : ::.: ..: : ::: : . . .: .: : NP_001 KPFRC--DTCDKSFHQRSALNRHCMVHTGEKPYRCEQ--CGKGFIGRLDFYKHQVVHTGE 320 330 340 350 360 190 200 210 220 230 240 pF1KE1 --YVCQK-GCSFVAKTWTE-LLKHVR-ETHKEEILCEVCRKTFKRKDYLKQHMKTHAPER : :.. : :: :. ::.: : .. .. . :: : : : .. :..:...:. :. NP_001 KPYNCKECGKSF---RWSSCLLNHQRVHSGEKSFKCEECGKGFYTNSQLSSHQRSHSGEK 370 380 390 400 410 420 250 260 270 280 290 300 pF1KE1 DVCRCPREGCGRTYTTVFNLQSHILSFHEESRPFVCEHAGCGKTFAMKQSLTRHAVVHDP .: : ::. :.: :::. : : ::. :.. :::.:. .:. : .: NP_001 PY-KC--EECGKGYVTKFNLDLH-QRVHTGERPYNCKE--CGKNFSRASSILNHKRLHC- 430 440 450 460 470 310 320 330 340 350 360 pF1KE1 DKKKMKLKVKKSREKRSLASHLSGYIPPKRKQGQGLSLCQNGESPNCVEDKMLSTVAVLT .:: .: . .: :. . :. .:.. : :.. NP_001 QKKPFKCEDCGKR----LVHRTYRKDQPRDYSGENPSKCEDCGRRYKRRLNLDILLSLFL 480 490 500 510 520 530 pF1KE1 LG NP_001 NDT 365 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:35:27 2016 done: Sun Nov 6 21:35:28 2016 Total Scan time: 5.670 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]