FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1588, 102 aa 1>>>pF1KE1588 102 - 102 aa - 102 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9821+/-0.000525; mu= 8.1795+/- 0.032 mean_var=96.4462+/-19.089, 0's: 0 Z-trim(117.9): 5 B-trim: 289 in 1/50 Lambda= 0.130597 statistics sampled from 18674 (18679) to 18674 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.872), E-opt: 0.2 (0.574), width: 16 Scan time: 1.390 The best scores are: opt bits E(32554) CCDS3880.1 DAP gene_id:1611|Hs108|chr5 ( 102) 724 144.6 9.8e-36 CCDS77997.1 DAP gene_id:1611|Hs108|chr5 ( 204) 361 76.5 6.5e-15 >>CCDS3880.1 DAP gene_id:1611|Hs108|chr5 (102 aa) initn: 724 init1: 724 opt: 724 Z-score: 755.0 bits: 144.6 E(32554): 9.8e-36 Smith-Waterman score: 724; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE1 MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDTKEEKDKDDQEWESPSPPKPTVFIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS38 MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDTKEEKDKDDQEWESPSPPKPTVFIS 10 20 30 40 50 60 70 80 90 100 pF1KE1 GVIARGDKDFPPAAAQVAHQKPHASMDKHPSPRTQHIQQPRK :::::::::::::::::::::::::::::::::::::::::: CCDS38 GVIARGDKDFPPAAAQVAHQKPHASMDKHPSPRTQHIQQPRK 70 80 90 100 >>CCDS77997.1 DAP gene_id:1611|Hs108|chr5 (204 aa) initn: 386 init1: 355 opt: 361 Z-score: 381.2 bits: 76.5 E(32554): 6.5e-15 Smith-Waterman score: 361; 59.4% identity (74.3% similar) in 101 aa overlap (1-100:1-95) 10 20 30 40 50 pF1KE1 MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDTKEEKDKDDQEWESPSPPKPTVF-I :::::::::::::::::::::::::::::::::::::::::::::::::: : . . CCDS77 MSSPPEGKLETKAGHPPAVKAGGMRIVQKHPHTGDTKEEKDKDDQEWESPRVTKISPRRL 10 20 30 40 50 60 60 70 80 90 100 pF1KE1 SGVIARGDKDFPPAAAQVAHQKPHASMDKHPSPRTQHIQQPRK ..:. .:: .. . :.: .: .. : ..:: CCDS77 RRWLTRS--RMPPWTS-ILPQEPSTSSSHASEP---GVHQPAPWPRLCCTWYFPDRENQQ 70 80 90 100 110 CCDS77 FRPNPTLLGNLRQNQVLCPLPYISIFKTRNSSSPNLVYGESGWMSFEDHCAPRGAISRIC 120 130 140 150 160 170 102 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:40:10 2016 done: Sun Nov 6 21:40:11 2016 Total Scan time: 1.390 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]