################################## # NO CUT ENZYMES ( 116 enzymes) # ################################## AatII Acc65I AccIII AclI AflIII AgeI AhdI Alw44I AlwNI AocI Aor51HI ApaLI AscI Asp718I AspEI AspI AviII AvrII BbrPI BbsI BcgI BciVI BclI BglII BlnI BlpI Bpu1102I BpuAI BsaBI BsaWI BseAI BsgI BsiWI BsmBI BsmI Bsp1407I BspDI BspEI BspHI BspLU11I BsrBI BsrGI BssHII BssSI Bst1107I BstAPI BstBI BstEII BstPI BstXI BstZ17I Bsu36I CelII ClaI CpoI Eam1105I Eco47III Eco81I EcoNI EcoO65I EcoRI EcoRV FbaI FseI FspI HindIII HpaI KpnI KspI MaeIII MamI MluI MroI NcoI NdeI NheI NotI NruI NspV PacI PaeR7I PflFI PinAI PmaCI PmeI PmlI PpuMI PshAI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfcI SfiI SfuI SgrAI SnaBI SphI Sse8387I SspBI SspI StuI SwaI TaqI Tsp45I Tth111I TthHB8I XhoI ################################### # ONE CUT ENZYMES ( 41 enzymes) # ################################### AccI 1699 GTAGAC GT^[AC][GT]AC AcsI 390 AAATTC [GA]^AATT[CT] ApaI 114 GGGCCC GGGCC^C ApoI 390 AAATTC [GA]^AATT[CT] AseI 1060 ATTAAT AT^TAAT AsnI 1060 ATTAAT AT^TAAT AvaI 106 CCCGGG C^[CT]CG[GA]G BalI 885 TGGCCA TGG^CCA BamHI 3 GGATCC G^GATCC BanII 114 GGGCCC G[GA]GC[CT]^C BbvCI 171 CCTCAGC CCTCAGC(-5/-2) BglI 116 GCCCTTGCGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BsaAI 649 CACGTA [CT]AC^GT[GA] BsaI 1801 GAGACC GGTCTC(1/5) BsiEI 149 CGGCCG CG[GA][CT]^CG BsoBI 106 CCCGGG C^[CT]CG[GA]G BspMI 1033 GCAGGT ACCTGC(4/8) BstF5I 1071 GGATG GGATG(2/0) DraI 1807 TTTAAA TTT^AAA DraII 114 GGGCCCT [GA]G^G[ACGT]CC[CT] DraIII 1420 CACAACGTG CAC[ACGT][ACGT][ACGT]^GTG DrdI 441 GACAGAAATGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC DsaI 309 CCACGG C^C[GA][CT]GG EagI 149 CGGCCG C^GGCCG EclXI 149 CGGCCG C^GGCCG Eco52I 149 CGGCCG C^GGCCG EcoO109I 114 GGGCCCT [GA]G^G[ACGT]CC[CT] EcoT22I 1761 ATGCAT ATGCA^T FokI 1071 GGATG GGATG(9/13) MluNI 885 TGGCCA TGG^CCA MscI 885 TGGCCA TGG^CCA NsiI 1761 ATGCAT ATGCA^T PflMI 499 CCAGGGGGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG PleI 64 GACTC GAGTC(4/5) PshBI 1060 ATTAAT AT^TAAT SmaI 106 CCCGGG CCC^GGG SpeI 1125 ACTAGT A^CTAGT Van91I 499 CCAGGGGGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG XbaI 873 TCTAGA T^CTAGA XmaCI 106 CCCGGG C^CCGGG XmaI 106 CCCGGG C^CCGGG ################################### # TWO CUT ENZYMES ( 39 enzymes) # ################################### AccII 177 CGCG CG^CG 327 CGCG AcyI 69 GGCGCC G[GA]^CG[CT]C 295 GGCGCC AflII 1773 CTTAAG C^TTAAG 1839 CTTAAG Asp700I 858 GAAGCATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1439 GAATACTTTC BbeI 69 GGCGCC GGCGC^C 295 GGCGCC BfaI 874 CTAG C^TAG 1126 CTAG BfrI 1773 CTTAAG C^TTAAG 1839 CTTAAG BpmI 452 CTCCAG CTGGAG(16/14) 1199 CTGGAG BsaHI 69 GGCGCC G[GA]^CG[CT]C 295 GGCGCC BsmFI 83 GGGAC GGGAC(10/14) 901 GTCCC BsrFI 188 GCCGGC [GA]^CCGG[CT] 316 GCCGGC BstUI 177 CGCG CG^CG 327 CGCG BstYI 3 GGATCC [GA]^GATC[CT] 1375 GGATCT Cfr10I 188 GCCGGC [GA]^CCGG[CT] 316 GCCGGC EaeI 149 CGGCCG [CT]^GGCC[GA] 885 TGGCCA EarI 565 GAAGAG CTCTTC(1/4) 1516 GAAGAG EcoT14I 512 CCTTGG C^C[AT][AT]GG 1234 CCTTGG HgaI 717 GACGC GACGC(5/10) 1574 GACGC Hin1I 69 GGCGCC G[GA]^CG[CT]C 295 GGCGCC HphI 1480 GGTGA GGTGA(8/7) 1835 TCACC KasI 69 GGCGCC G^GCGCC 295 GGCGCC Ksp632I 565 GAAGAG CTCTTC(1/4) 1516 GAAGAG MaeI 874 CTAG C^TAG 1126 CTAG MfeI 1319 CAATTG C^AATTG 1865 CAATTG MflI 3 GGATCC [GA]^GATC[CT] 1375 GGATCT MslI 625 CATGTAAATG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 649 CACGTAGATG MunI 1319 CAATTG C^AATTG 1865 CAATTG MvnI 177 CGCG CG^CG 327 CGCG NaeI 188 GCCGGC GCC^GGC 316 GCCGGC NarI 69 GGCGCC GG^CGCC 295 GGCGCC NgoMIV 188 GCCGGC G^CCGGC 316 GCCGGC NspI 624 GCATGT [GA]CATG^[CT] 1011 ACATGC PvuII 287 CAGCTG CAG^CTG 395 CAGCTG SfoI 69 GGCGCC GGC^GCC 295 GGCGCC StyI 512 CCTTGG C^C[AT][AT]GG 1234 CCTTGG TspRI 12 CAGTG CA[GC]TG[ACGT][ACGT]^ 1347 CACTG XcmI 454 CCAGAAGAATCATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG 1078 CCAACAGTAAATTGG XhoII 3 GGATCC [GA]^GATC[CT] 1375 GGATCT XmnI 858 GAAGCATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1439 GAATACTTTC ######################################### # 3 OR MORE CUT ENZYMES ( 62 enzymes) # ######################################### AciI AfaI AluI AlwI AspHI AvaII BanI BbvI BcnI BmyI BsaJI BseRI BsiHKAI BsiYI BslI BsmAI Bsp1286I BsrDI BsrI BssKI BstNI Cac8I CfoI Cfr13I DdeI DpnII EcoRII FauI Fnu4HI HaeII HaeIII HapII HhaI HinP1I HincII HindII HinfI HpaII ItaI MaeII MboI MboII MnlI MseI MspA1I MspI MvaI MwoI NciI NdeII NlaIII NlaIV RsaI Sau3AI Sau96I ScrFI SfaNI SmlI TfiI Tru9I TseI Tsp509I