FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2037, 634 aa 1>>>pF1KE2037 634 - 634 aa - 634 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4795+/-0.000335; mu= 11.7779+/- 0.021 mean_var=178.2690+/-35.810, 0's: 0 Z-trim(120.9): 22 B-trim: 157 in 1/58 Lambda= 0.096059 statistics sampled from 36663 (36686) to 36663 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.43), width: 16 Scan time: 12.750 The best scores are: opt bits E(85289) NP_002085 (OMIM: 139259) eukaryotic peptide chain ( 637) 4271 604.2 4.4e-172 NP_001123478 (OMIM: 139259) eukaryotic peptide cha ( 636) 4254 601.9 2.2e-171 NP_060564 (OMIM: 300418) eukaryotic peptide chain ( 628) 3674 521.5 3.5e-147 NP_001123479 (OMIM: 139259) eukaryotic peptide cha ( 499) 3362 478.2 3.1e-134 NP_001138630 (OMIM: 612450) HBS1-like protein isof ( 642) 1162 173.4 2.2e-42 NP_006611 (OMIM: 612450) HBS1-like protein isoform ( 684) 1162 173.4 2.3e-42 XP_011533816 (OMIM: 130590) PREDICTED: elongation ( 462) 707 110.2 1.7e-23 NP_001393 (OMIM: 130590) elongation factor 1-alpha ( 462) 707 110.2 1.7e-23 NP_001949 (OMIM: 602959,616393,616409) elongation ( 463) 704 109.8 2.2e-23 NP_003312 (OMIM: 602389,610678) elongation factor ( 455) 272 49.9 2.3e-05 XP_016879108 (OMIM: 602389,610678) PREDICTED: elon ( 455) 272 49.9 2.3e-05 XP_011544230 (OMIM: 602389,610678) PREDICTED: elon ( 427) 235 44.8 0.00078 >>NP_002085 (OMIM: 139259) eukaryotic peptide chain rele (637 aa) initn: 4257 init1: 4257 opt: 4271 Z-score: 3210.4 bits: 604.2 E(85289): 4.4e-172 Smith-Waterman score: 4271; 99.4% identity (99.4% similar) in 637 aa overlap (1-634:1-637) 10 20 30 40 50 pF1KE2 MDPGSGGGGGGGG---SSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: NP_002 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRCPAAPPPPAGGAANNHGAGSGAGGRAAPV ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: NP_002 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE2 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE2 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE2 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE2 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 550 560 570 580 590 600 600 610 620 630 pF1KE2 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD ::::::::::::::::::::::::::::::::::::: NP_002 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 610 620 630 >>NP_001123478 (OMIM: 139259) eukaryotic peptide chain r (636 aa) initn: 3389 init1: 3389 opt: 4254 Z-score: 3197.7 bits: 601.9 E(85289): 2.2e-171 Smith-Waterman score: 4254; 99.2% identity (99.2% similar) in 637 aa overlap (1-634:1-636) 10 20 30 40 50 pF1KE2 MDPGSGGGGGGGG---SSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: NP_001 MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQREN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE2 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRCPAAPPPPAGGAANNHGAGSGAGGRAAPV ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: NP_001 LSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAGGRAAPV 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE2 ESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: NP_001 ESSQEEQSLCEGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRP 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVD 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGH 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE2 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKM 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE2 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGL 360 370 380 390 400 410 420 430 440 450 460 470 pF1KE2 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVE 420 430 440 450 460 470 480 490 500 510 520 530 pF1KE2 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEH 480 490 500 510 520 530 540 550 560 570 580 590 pF1KE2 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGT 540 550 560 570 580 590 600 610 620 630 pF1KE2 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD ::::::::::::::::::::::::::::::::::::: NP_001 ICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 600 610 620 630 >>NP_060564 (OMIM: 300418) eukaryotic peptide chain rele (628 aa) initn: 3523 init1: 3198 opt: 3674 Z-score: 2763.4 bits: 521.5 E(85289): 3.5e-147 Smith-Waterman score: 3674; 88.5% identity (94.4% similar) in 627 aa overlap (16-634:3-628) 10 20 30 40 50 60 pF1KE2 MDPGSGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSA :::::::::::::::.:::.:: .: : : : .:.:::::: ::. NP_060 MDSGSSSSDSAPDCWDQVDMESPGSAPSGDGVS-SAVAEAQREPLSS 10 20 30 40 70 80 90 100 110 pF1KE2 AFSRQLNVNAKPFVPNVHAAEFVPSFLRCPAAPPP-PAGGAANNH---GAGSGAG---GR ::::.::::::::::::::::::::::: :. :: :::...:.. ::: : :: NP_060 AFSRKLNVNAKPFVPNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGR 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 AAPVESSQEEQSLC-EGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSL .:::: :.:: . :::::::.::::::.:::::.::. ::::::..:.::::::::: NP_060 GAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 GDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYL ::. :::::..:::::.::: : :::..: ::::::::::::::::::::::::::::.: NP_060 GDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTIL :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: NP_060 TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTIL 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE2 LINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCP ::::::::::::: :::::::::::::::::::.:::::::::::::::::.:::::::: NP_060 LINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCP 350 360 370 380 390 400 420 430 440 450 460 470 pF1KE2 WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPN :: :::::::::::::::::.:::::::::::::::::::::::::::: :::::::::: NP_060 WYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPN 410 420 430 440 450 460 480 490 500 510 520 530 pF1KE2 KHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQI :::::::::::::.::: ::::::::::::::::::::::::::::.::::::::::.:: NP_060 KHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQI 470 480 490 500 510 520 540 550 560 570 580 590 pF1KE2 VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: NP_060 VIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARL 530 540 550 560 570 580 600 610 620 630 pF1KE2 RTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD :::::::::::::::::::::::::::::::::::::::::: NP_060 RTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 590 600 610 620 >>NP_001123479 (OMIM: 139259) eukaryotic peptide chain r (499 aa) initn: 3362 init1: 3362 opt: 3362 Z-score: 2531.0 bits: 478.2 E(85289): 3.1e-134 Smith-Waterman score: 3362; 100.0% identity (100.0% similar) in 499 aa overlap (136-634:1-499) 110 120 130 140 150 160 pF1KE2 AGSGAGGRAAPVESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEA :::::::::::::::::::::::::::::: NP_001 MELSEPIVENGETEMSPEESWEHKEEISEA 10 20 30 170 180 190 200 210 220 pF1KE2 EPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTI 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE2 GGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE 100 110 120 130 140 150 290 300 310 320 330 340 pF1KE2 KKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTA 160 170 180 190 200 210 350 360 370 380 390 400 pF1KE2 GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLK 220 230 240 250 260 270 410 420 430 440 450 460 pF1KE2 EQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQSDFCPWYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQ 280 290 300 310 320 330 470 480 490 500 510 520 pF1KE2 QLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSG 340 350 360 370 380 390 530 540 550 560 570 580 pF1KE2 RTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQD 400 410 420 430 440 450 590 600 610 620 630 pF1KE2 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD ::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 460 470 480 490 >>NP_001138630 (OMIM: 612450) HBS1-like protein isoform (642 aa) initn: 926 init1: 637 opt: 1162 Z-score: 881.8 bits: 173.4 E(85289): 2.2e-42 Smith-Waterman score: 1170; 37.3% identity (66.5% similar) in 549 aa overlap (107-629:97-640) 80 90 100 110 120 130 pF1KE2 VHAAEFVPSFLRCPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEG------S :. : :. . ..:. :. . : NP_001 KFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVS 70 80 90 100 110 120 140 150 160 170 180 pF1KE2 NSAVSMELSEPIV---ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME .. .: . : : :::.. .:... .. :. .. . .. ::. . : NP_001 GKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASE 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 EEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGM :. : : ... . : :. .:.: ::::::::::. :...:: : NP_001 EQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGN 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE2 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP ..:::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..::: NP_001 INKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAP 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE2 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN :::.:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .: NP_001 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE2 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCP :::. :::..::..: :: :::..::. ..:. :.: :::.: :: ...:.. NP_001 KMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTK 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE2 WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMM :: :: .. .:.. .::.: :.:: . : .::.:. . ::.:.: : :..:. : NP_001 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAM 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE2 PNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDA : ... : :: : .: .: :..... : :.. .: : :.: :. .. : : NP_001 PPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE2 QIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIA .:.:.. . : :. ..:: .: : . : :: ...:..:: .: .:.:. . : .. NP_001 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALV 550 560 570 580 590 600 600 610 620 630 pF1KE2 RLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD .:.: : :: .::: ..::: :: :.::: : : .. NP_001 ELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 610 620 630 640 >>NP_006611 (OMIM: 612450) HBS1-like protein isoform 1 [ (684 aa) initn: 926 init1: 637 opt: 1162 Z-score: 881.5 bits: 173.4 E(85289): 2.3e-42 Smith-Waterman score: 1170; 37.3% identity (66.5% similar) in 549 aa overlap (107-629:139-682) 80 90 100 110 120 130 pF1KE2 VHAAEFVPSFLRCPAAPPPPAGGAANNHGAGSGAGGRAAPVESSQEEQSLCEG------S :. : :. . ..:. :. . : NP_006 KFDVQKALSGVLEQDRVQSLKDKNEATVSTGKIAKGKPVDSQTSRSESEIVPKVAKMTVS 110 120 130 140 150 160 140 150 160 170 180 pF1KE2 NSAVSMELSEPIV---ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME .. .: . : : :::.. .:... .. :. .. . .. ::. . : NP_006 GKKQTMGFEVPGVSSEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTI--QASE 170 180 190 200 210 220 190 200 210 220 230 pF1KE2 EEEEIPKP--------KSVVAPPGAPK----KEHVNVVFIGHVDAGKSTIGGQIMYLTGM :. : : ... . : :. .:.: ::::::::::. :...:: : NP_006 EQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGN 230 240 250 260 270 280 240 250 260 270 280 290 pF1KE2 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP ..:::..:::.:.:. .. .. .:.:: . :::..: :..:: . ::: : .:..::: NP_006 INKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAP 290 300 310 320 330 340 300 310 320 330 340 350 pF1KE2 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN :::.:.:::: ::.:::.::::..: .::::.::: :::::::..:... :: .: : .: NP_006 GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN 350 360 370 380 390 400 360 370 380 390 400 410 pF1KE2 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANL---KEQSDFCP :::. :::..::..: :: :::..::. ..:. :.: :::.: :: ...:.. NP_006 KMDQ--VNWQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTK 410 420 430 440 450 460 420 430 440 450 460 470 pF1KE2 WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGT--VVLGKLESGSICKGQQLVMM :: :: .. .:.. .::.: :.:: . : .::.:. . ::.:.: : :..:. : NP_006 WYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAM 470 480 490 500 510 520 480 490 500 510 520 530 pF1KE2 PNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDA : ... : :: : .: .: :..... : :.. .: : :.: :. .. : : NP_006 PPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRA 530 540 550 560 570 580 540 550 560 570 580 590 pF1KE2 QIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIA .:.:.. . : :. ..:: .: : . : :: ...:..:: .: .:.:. . : .. NP_006 RILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALV 590 600 610 620 630 640 600 610 620 630 pF1KE2 RLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD .:.: : :: .::: ..::: :: :.::: : : .. NP_006 ELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 650 660 670 680 >>XP_011533816 (OMIM: 130590) PREDICTED: elongation fact (462 aa) initn: 909 init1: 642 opt: 707 Z-score: 542.9 bits: 110.2 E(85289): 1.7e-23 Smith-Waterman score: 1046; 38.4% identity (66.7% similar) in 445 aa overlap (206-633:4-444) 180 190 200 210 220 230 pF1KE2 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM .: :.:.: :::::.:::: :...: : XP_011 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 240 250 260 270 280 290 pF1KE2 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : . ::.::: XP_011 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAP 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE2 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: XP_011 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE2 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYI :::. .:..:::: ... ..::.:.:: . :.: :: .: :. : : ::. XP_011 KMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDT-VAFVPISGWNGDNMLEPSANMPWFK 160 170 180 190 200 210 420 430 440 450 460 pF1KE2 G------------LPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI : .. :: . .: .: :.:::. : :: .::: .:..:.: . XP_011 GWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 220 230 240 250 260 270 470 480 490 500 510 520 pF1KE2 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNN- :. ... : . ..:: .. . . ::.:. . .:.. ... : . : .: XP_011 KPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKND 280 290 300 310 320 330 530 540 550 560 570 pF1KE2 --LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTR . .: : ::..:..: . : :: :: :: ... : .:..::.: . XP_011 PPMEAAG--FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDG 340 350 360 370 380 390 580 590 600 610 620 630 pF1KE2 PRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD :.:.:. .. :. . . .:.:.:.:.: .:::..:: .:.:.: :.: : .: XP_011 PKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVG-VIKAVDKKAAGAG 400 410 420 430 440 XP_011 KVTKSAQKAQKAK 450 460 >>NP_001393 (OMIM: 130590) elongation factor 1-alpha 1 [ (462 aa) initn: 909 init1: 642 opt: 707 Z-score: 542.9 bits: 110.2 E(85289): 1.7e-23 Smith-Waterman score: 1046; 38.4% identity (66.7% similar) in 445 aa overlap (206-633:4-444) 180 190 200 210 220 230 pF1KE2 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM .: :.:.: :::::.:::: :...: : NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 240 250 260 270 280 290 pF1KE2 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : . ::.::: NP_001 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAP 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE2 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: NP_001 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE2 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYI :::. .:..:::: ... ..::.:.:: . :.: :: .: :. : : ::. NP_001 KMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDT-VAFVPISGWNGDNMLEPSANMPWFK 160 170 180 190 200 210 420 430 440 450 460 pF1KE2 G------------LPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI : .. :: . .: .: :.:::. : :: .::: .:..:.: . NP_001 GWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 220 230 240 250 260 270 470 480 490 500 510 520 pF1KE2 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNN- :. ... : . ..:: .. . . ::.:. . .:.. ... : . : .: NP_001 KPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKND 280 290 300 310 320 330 530 540 550 560 570 pF1KE2 --LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTR . .: : ::..:..: . : :: :: :: ... : .:..::.: . NP_001 PPMEAAG--FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDG 340 350 360 370 380 390 580 590 600 610 620 630 pF1KE2 PRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD :.:.:. .. :. . . .:.:.:.:.: .:::..:: .:.:.: :.: : .: NP_001 PKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVG-VIKAVDKKAAGAG 400 410 420 430 440 NP_001 KVTKSAQKAQKAK 450 460 >>NP_001949 (OMIM: 602959,616393,616409) elongation fact (463 aa) initn: 886 init1: 640 opt: 704 Z-score: 540.6 bits: 109.8 E(85289): 2.2e-23 Smith-Waterman score: 1020; 37.2% identity (67.5% similar) in 443 aa overlap (206-633:4-444) 180 190 200 210 220 230 pF1KE2 RPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM .: :.:.: :::::.:::: :...: : NP_001 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGG 10 20 30 240 250 260 270 280 290 pF1KE2 VDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP .::::.::.:.:: : .. .. .:.:: . ::..: :.... ::: : ..::.::: NP_001 IDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAP 40 50 60 70 80 90 300 310 320 330 340 350 pF1KE2 GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLIN ::..:. ::: :.:::: :::...: ::::.:. :.:::::::.:: : :::.::: .: NP_001 GHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVN 100 110 120 130 140 150 360 370 380 390 400 410 pF1KE2 KMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYI :::. .:..::.: ... ..::.:.:: . :.: :: : :. : : ::. NP_001 KMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPAT-VPFVPISGWHGDNMLEPSPNMPWFK 160 170 180 190 200 210 420 430 440 450 460 pF1KE2 G------------LPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSI : . .. ::.. .: .: :.:::. : :: .::: .:..:.: . NP_001 GWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGIL 220 230 240 250 260 270 470 480 490 500 510 520 pF1KE2 CKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NN :. ... : . ..:: .. . . ::.:. . .:.. ..: : . : .. NP_001 RPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSD 280 290 300 310 320 330 530 540 550 560 570 580 pF1KE2 LCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPR . . : .:..:..: . : ::. :. :: ... : .:..::.: . :. NP_001 PPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPK 340 350 360 370 380 390 590 600 610 620 630 pF1KE2 FVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD .:. .. :... . .:.:.:...: .:::..:: .:.:.: :.: : .: NP_001 SLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVG-VIKNVEKKSGGAGKV 400 410 420 430 440 450 NP_001 TKSAQKAQKAGK 460 >>NP_003312 (OMIM: 602389,610678) elongation factor Tu, (455 aa) initn: 407 init1: 148 opt: 272 Z-score: 217.2 bits: 49.9 E(85289): 2.3e-05 Smith-Waterman score: 401; 27.8% identity (54.7% similar) in 338 aa overlap (207-535:58-362) 180 190 200 210 220 230 pF1KE2 PPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMV : :::: ::::: ::.:. . : . . NP_003 QGLLRLLKAPALPLLCRGLAVEAKKTYVRDKPHVNVGTIGHVDHGKTTLTAAITKILAEG 30 40 50 60 70 80 240 250 260 270 280 290 pF1KE2 DKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPG ..:::. .:. ::: .: :...... . : .:.. : :: NP_003 GGAKFKKYEE---------------IDNAPEERARGITINAAHVEYSTAARHYAHTDCPG 90 100 110 120 130 300 310 320 330 340 350 pF1KE2 HKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINK : ..: ::: :.. : .::..: : . ::::: .::. ::.:..: .:: NP_003 HADYVKNMITGTAPLDGCILVVAANDGPMP-------QTREHLLLARQIGVEHVVVYVNK 140 150 160 170 180 360 370 380 390 400 410 pF1KE2 MDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIG : . ..: : . .. .: . :.. .. : ..:. : : .: NP_003 AD---AVQDSEMVELVELEIRELLTEFGYKGEET----PV--IVGSALCALEGRDP-ELG 190 200 210 220 230 420 430 440 450 460 pF1KE2 LPFIPYLDN-----LPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVM : . : . .: :... :. ::. :. :::: : :: : . ::.. . NP_003 LKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECEL 240 250 260 270 280 290 470 480 490 500 510 520 pF1KE2 MPNKHNVE--VLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRT . ...:.. : :: . . :.:: ..:...:.. :... :... . . NP_003 LGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKPGSI-KPHQK 300 310 320 330 340 350 530 540 550 560 570 580 pF1KE2 FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQV .::. :. NP_003 VEAQVYILSKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPEKELAMPGEDLKFNLILR 360 370 380 390 400 410 634 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:40:49 2016 done: Sun Nov 6 21:40:51 2016 Total Scan time: 12.750 Total Display time: 0.130 Function used was FASTA [36.3.4 Apr, 2011]