FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2210, 879 aa 1>>>pF1KE2210 879 - 879 aa - 879 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4047+/-0.00128; mu= 15.9612+/- 0.077 mean_var=96.7225+/-19.008, 0's: 0 Z-trim(102.3): 28 B-trim: 40 in 2/51 Lambda= 0.130410 statistics sampled from 6874 (6879) to 6874 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.552), E-opt: 0.2 (0.211), width: 16 Scan time: 3.740 The best scores are: opt bits E(32554) CCDS3503.1 EXOC1 gene_id:55763|Hs108|chr4 ( 879) 5702 1084.2 0 CCDS3502.1 EXOC1 gene_id:55763|Hs108|chr4 ( 894) 2892 555.6 1.5e-157 >>CCDS3503.1 EXOC1 gene_id:55763|Hs108|chr4 (879 aa) initn: 5702 init1: 5702 opt: 5702 Z-score: 5799.5 bits: 1084.2 E(32554): 0 Smith-Waterman score: 5702; 100.0% identity (100.0% similar) in 879 aa overlap (1-879:1-879) 10 20 30 40 50 60 pF1KE2 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 EIKDFFEVAKIKMTGTTKESKKFGLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 EIKDFFEVAKIKMTGTTKESKKFGLHGSSGKLTGSTSSLNKLSVQSSGNRRSQSSSLLDM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 GNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQQHQSMPGTMAEAEDL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 DGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 DGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIALGDKIDSFNSLYMLVK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 MSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEEVKISKKSKVGILPFV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 AEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 AEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANESQKTPRDVVMMENFHH 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 IFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGIRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 IFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNHFFEGVEARVAQGIRE 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 EEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 EEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEENLLQVVWHSMQDEFI 790 800 810 820 830 840 850 860 870 pF1KE2 RQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH ::::::::::::::::::::::::::::::::::::::: CCDS35 RQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 850 860 870 >>CCDS3502.1 EXOC1 gene_id:55763|Hs108|chr4 (894 aa) initn: 5680 init1: 2857 opt: 2892 Z-score: 2942.2 bits: 555.6 E(32554): 1.5e-157 Smith-Waterman score: 5654; 98.2% identity (98.3% similar) in 894 aa overlap (1-879:1-894) 10 20 30 40 50 60 pF1KE2 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MTAIKHALQRDIFTPNDERLLSIVNVCKAGKKKKNCFLCATVTTERPVQVKVVKVKKSDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GDFYKRQIAWALRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 RYLRKKIDFVNVSSQLLEESVPSGENQSVTGGDEEVVDEYQELNAREEQDIEIMMEGCEY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 AISNAEAFAEKLSRELQVLDGANIQSIMASEKQVNILMKLLDEALKEVDQIELKLSSYEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MLQSVKEQMDQISESNHLIHLSNTNNVKLLSEIEFLVNHMDLAKGHIKALQEGDLASSRG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 IEACTNAADALLQCMNVALRPGHDLLLAVKQQQQRFSDLRELFARRLASHLNNVFVQQGH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 DQSSTLAQHSVELTLPNHHPFHRDLLRYAKLMEWLKSTDYGKYEGLTKNYMDYLSRLYER 370 380 390 400 410 420 430 440 450 460 pF1KE2 EIKDFFEVAKIKMTGTTKESKKFG---------------LHGSSGKLTGSTSSLNKLSVQ :::::::::::::::::::::::. ::::::::::::::::::::: CCDS35 EIKDFFEVAKIKMTGTTKESKKFATLPRKESAVKQETESLHGSSGKLTGSTSSLNKLSVQ 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE2 SSGNRRSQSSSLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 SSGNRRSQSSSLLDMGNMSASDLDVADRTKFDKIFEQVLSELEPLCLAEQDFISKFFKLQ 490 500 510 520 530 540 530 540 550 560 570 580 pF1KE2 QHQSMPGTMAEAEDLDGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QHQSMPGTMAEAEDLDGGTLSRQHNCGTPLPVSSEKDMIRQMMIKIFRCIEPELNNLIAL 550 560 570 580 590 600 590 600 610 620 630 640 pF1KE2 GDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 GDKIDSFNSLYMLVKMSHHVWTAQNVDPASFLSTTLGNVLVTVKRNFDKCISNQIRQMEE 610 620 630 640 650 660 650 660 670 680 690 700 pF1KE2 VKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 VKISKKSKVGILPFVAEFEEFAGLAESIFKNAERRGDLDKAYTKLIRGVFVNVEKVANES 670 680 690 700 710 720 710 720 730 740 750 760 pF1KE2 QKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QKTPRDVVMMENFHHIFATLSRLKISCLEAEKKEAKQKYTDHLQSYVIYSLGQPLEKLNH 730 740 750 760 770 780 770 780 790 800 810 820 pF1KE2 FFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 FFEGVEARVAQGIREEEVSYQLAFNKQELRKVIKEYPGKEVKKGLDNLYKKVDKHLCEEE 790 800 810 820 830 840 830 840 850 860 870 pF1KE2 NLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 NLLQVVWHSMQDEFIRQYKHFEGLIARCYPGSGVTMEFTIQDILDYCSSIAQSH 850 860 870 880 890 879 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:47:46 2016 done: Sun Nov 6 21:47:47 2016 Total Scan time: 3.740 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]