Result of FASTA (ccds) for
pFN21AB5889
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5889, 493 aa
1>>>pF1KB5889 493 - 493 aa - 493 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.2071+/-0.00103; mu= -9.3887+/- 0.062
mean_var=538.5524+/-112.957, 0's: 0 Z-trim(117.4): 734 B-trim: 0 in 0/54
Lambda= 0.055266
statistics sampled from 17332 (18135) to 17332 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.557), width: 16
Scan time: 4.240
The best scores are: opt bits E(32554)
CCDS42144.1 MAZ gene_id:4150|Hs108|chr16 ( 493) 3413 286.4 4.8e-77
CCDS42143.1 MAZ gene_id:4150|Hs108|chr16 ( 477) 2935 248.3 1.4e-65
CCDS61902.1 MAZ gene_id:4150|Hs108|chr16 ( 454) 2682 228.1 1.6e-59
CCDS13894.1 PATZ1 gene_id:23598|Hs108|chr22 ( 687) 945 89.8 1e-17
CCDS82169.1 VEZF1 gene_id:7716|Hs108|chr17 ( 512) 880 84.5 3.1e-16
CCDS32687.1 VEZF1 gene_id:7716|Hs108|chr17 ( 521) 880 84.5 3.1e-16
CCDS46691.1 PATZ1 gene_id:23598|Hs108|chr22 ( 537) 858 82.7 1.1e-15
CCDS13895.1 PATZ1 gene_id:23598|Hs108|chr22 ( 641) 849 82.1 2e-15
>>CCDS42144.1 MAZ gene_id:4150|Hs108|chr16 (493 aa)
initn: 3413 init1: 3413 opt: 3413 Z-score: 1496.7 bits: 286.4 E(32554): 4.8e-77
Smith-Waterman score: 3413; 100.0% identity (100.0% similar) in 493 aa overlap (1-493:1-493)
10 20 30 40 50 60
pF1KB5 MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 HSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 STERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 STERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 CELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 CELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAP
430 440 450 460 470 480
490
pF1KB5 PVPGDAPQPQPTC
:::::::::::::
CCDS42 PVPGDAPQPQPTC
490
>>CCDS42143.1 MAZ gene_id:4150|Hs108|chr16 (477 aa)
initn: 2935 init1: 2935 opt: 2935 Z-score: 1290.9 bits: 248.3 E(32554): 1.4e-65
Smith-Waterman score: 2935; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427)
10 20 30 40 50 60
pF1KB5 MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MFPVFPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB5 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASAL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB5 EKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB5 LSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 LSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB5 HSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 HSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB5 STERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 STERPFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB5 CELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAP
:::::::
CCDS42 CELCNKGTGEVCPMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQPW
430 440 450 460 470
>>CCDS61902.1 MAZ gene_id:4150|Hs108|chr16 (454 aa)
initn: 2682 init1: 2682 opt: 2682 Z-score: 1182.1 bits: 228.1 E(32554): 1.6e-59
Smith-Waterman score: 2682; 100.0% identity (100.0% similar) in 393 aa overlap (35-427:12-404)
10 20 30 40 50 60
pF1KB5 FPCTLLAPPFPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQGCAQSPFQ
::::::::::::::::::::::::::::::
CCDS61 MDPSNWSSFIFQGHAQNPLQVGAELQSRFFASQGCAQSPFQ
10 20 30 40
70 80 90 100 110 120
pF1KB5 AAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 AAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB5 AALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 AALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASALEKKT
110 120 130 140 150 160
190 200 210 220 230 240
pF1KB5 KSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KSKGPYICALCAKEFKNGYNLRRHEAIHTGAKAGRVPSGAMKMPTMVPLSLLSVPQLSGA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KB5 GGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GGGGGEAGAGGGAAAVAAGGVVTTTASGKRIRKNHACEMCGKAFRDVYHLNRHKLSHSDE
230 240 250 260 270 280
310 320 330 340 350 360
pF1KB5 KPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 KPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTER
290 300 310 320 330 340
370 380 390 400 410 420
pF1KB5 PFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 PFKCEKCEAAFATKDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELC
350 360 370 380 390 400
430 440 450 460 470 480
pF1KB5 NKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPVPG
:::
CCDS61 NKGTGEVCPMAAAAAAAAAAAAAAVAAPPTAVGSLSGAEGVPVSSQPLPSQPW
410 420 430 440 450
>>CCDS13894.1 PATZ1 gene_id:23598|Hs108|chr22 (687 aa)
initn: 1118 init1: 923 opt: 945 Z-score: 431.5 bits: 89.8 E(32554): 1e-17
Smith-Waterman score: 997; 41.4% identity (63.1% similar) in 415 aa overlap (69-474:177-555)
40 50 60 70 80 90
pF1KB5 QNPLQVGAELQSRFFASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAA
:: : . . ::.. .::: ... :.
CCDS13 SVIEICQEVIKQSNVQILVPPARADIMLFRPPGT--SDLGFPLDMTNGAALAANSNGIAG
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB5 AAAAAAAAAAVAAAPPAPAAASTVDTAALKQPP-APPPPPPPVSAP---AAEAAPPASAA
. :: .:.: : :. : .. . : : : : ...: .: .::: ..
CCDS13 SMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAGPLSPQLLTSPFPSVASSAPPLTGK
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB5 TIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTG
. : . ... .: . : :.::.: : .. ::.::: : :
CCDS13 RGRGRPRKANL--LDSMFGSP------GGLREAGILPCGLCGKVFTDANRLRQHEAQH-G
270 280 290 300 310
220 230 240 250 260 270
pF1KB5 AKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKR
. . .. : . .: : :.:. : .: : . .:
CCDS13 VTSLQL--GYIDLP---P------PRLGENGLPISEDPDG--------------PRKRSR
320 330 340 350
280 290 300 310 320 330
pF1KB5 IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVH
::. :::.::: ::::::::::::::: ::::.:::: :::::::::::::::::.:
CCDS13 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB5 KPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPC
::: :. :::.::::::::.:..:::..::: ::. :.:.:::.::::.: . ::.::::
CCDS13 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPC
420 430 440 450 460 470
400 410 420 430 440 450
pF1KB5 HVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGFTTAAYLRIHAVKDHGLQAPRADR---
.::::.: .::..::.: ::.:: . : .::.::..:.::..:. ::. :...:
CCDS13 QVCGKYLRAAYMADHLKKHSEGPSNFCSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQE
480 490 500 510 520 530
460 470 480 490
pF1KB5 -ILCKLCSVHC-KTPAQLAGHMQTHLGGAAPPVPGDAPQPQPTC
:: . :: .: .. :. .:
CCDS13 PILNGGAAFHCARTYGNKEGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSANGSFSCDM
540 550 560 570 580 590
>>CCDS82169.1 VEZF1 gene_id:7716|Hs108|chr17 (512 aa)
initn: 1124 init1: 835 opt: 880 Z-score: 405.0 bits: 84.5 E(32554): 3.1e-16
Smith-Waterman score: 999; 54.6% identity (77.1% similar) in 262 aa overlap (182-429:57-315)
160 170 180 190 200 210
pF1KB5 SAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI
:: : : ..:. :.: :...:.:::::.
CCDS82 EPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESC
30 40 50 60 70 80
220 230 240 250 260
pF1KB5 HTGAKAGRVPSGAMKMPT-MVPL-SLLS--------VPQLSGAGGGGGEAGAGGGAAAVA
::: : :. : :: .::: : .. : ..: . ...: . .. :
CCDS82 HTGIKLVSRPK---KTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSA
90 100 110 120 130 140
270 280 290 300 310
pF1KB5 AGGVVTTTASGKR----IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFK
. .. .: : :. ..::::::::::::::::::::::::::::::..::.:.::::
CCDS82 STTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFK
150 160 170 180 190 200
320 330 340 350 360 370
pF1KB5 RKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFAT
:::::.::::::.:.. :::.:: :::.:::::::. ::..::::::::::. : :::::
CCDS82 RKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFAT
210 220 230 240 250 260
380 390 400 410 420 430
pF1KB5 KDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGFTTAAYLRIH
:::::.: :::: :: :..:::.::.:::..:.:.:.:. :. :..:..
CCDS82 KDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEET
270 280 290 300 310 320
440 450 460 470 480 490
pF1KB5 AVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPVPGDAPQPQPTC
CCDS82 SNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAAT
330 340 350 360 370 380
>>CCDS32687.1 VEZF1 gene_id:7716|Hs108|chr17 (521 aa)
initn: 1124 init1: 835 opt: 880 Z-score: 404.9 bits: 84.5 E(32554): 3.1e-16
Smith-Waterman score: 999; 54.6% identity (77.1% similar) in 262 aa overlap (182-429:66-324)
160 170 180 190 200 210
pF1KB5 SAATIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI
:: : : ..:. :.: :...:.:::::.
CCDS32 EPPDQKPLLPIPITQKPQGAPETLKDAIGIKKEKPKTSFVCTYCSKAFRDSYHLRRHESC
40 50 60 70 80 90
220 230 240 250 260
pF1KB5 HTGAKAGRVPSGAMKMPT-MVPL-SLLS--------VPQLSGAGGGGGEAGAGGGAAAVA
::: : :. : :: .::: : .. : ..: . ...: . .. :
CCDS32 HTGIKLVSRPK---KTPTTVVPLISTIAGDSSRTSLVSTIAGILSTVTTSSSGTNPSSSA
100 110 120 130 140 150
270 280 290 300 310
pF1KB5 AGGVVTTTASGKR----IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFK
. .. .: : :. ..::::::::::::::::::::::::::::::..::.:.::::
CCDS32 STTAMPVTQSVKKPSKPVKKNHACEMCGKAFRDVYHLNRHKLSHSDEKPFECPICNQRFK
160 170 180 190 200 210
320 330 340 350 360 370
pF1KB5 RKDRMSYHVRSHDGAVHKPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFAT
:::::.::::::.:.. :::.:: :::.:::::::. ::..::::::::::. : :::::
CCDS32 RKDRMTYHVRSHEGGITKPYTCSVCGKGFSRPDHLSCHVKHVHSTERPFKCQTCTAAFAT
220 230 240 250 260 270
380 390 400 410 420 430
pF1KB5 KDRLRAHTVRHEEKVPCHVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGFTTAAYLRIH
:::::.: :::: :: :..:::.::.:::..:.:.:.:. :. :..:..
CCDS32 KDRLRTHMVRHEGKVSCNICGKLLSAAYITSHLKTHGQSQSINCNTCKQGISKTCMSEET
280 290 300 310 320 330
440 450 460 470 480 490
pF1KB5 AVKDHGLQAPRADRILCKLCSVHCKTPAQLAGHMQTHLGGAAPPVPGDAPQPQPTC
CCDS32 SNQKQQQQQQQQQQQQQQQQQQHVTSWPGKQVETLRLWEEAVKARKKEAANLCQTSTAAT
340 350 360 370 380 390
>>CCDS46691.1 PATZ1 gene_id:23598|Hs108|chr22 (537 aa)
initn: 992 init1: 847 opt: 858 Z-score: 395.3 bits: 82.7 E(32554): 1.1e-15
Smith-Waterman score: 910; 43.1% identity (64.3% similar) in 364 aa overlap (69-428:177-504)
40 50 60 70 80 90
pF1KB5 QNPLQVGAELQSRFFASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAA
:: : . . ::.. .::: ... :.
CCDS46 SVIEICQEVIKQSNVQILVPPARADIMLFRPPGT--SDLGFPLDMTNGAALAANSNGIAG
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB5 AAAAAAAAAAVAAAPPAPAAASTVDTAALKQPP-APPPPPPPVSAP---AAEAAPPASAA
. :: .:.: : :. : .. . : : : : ...: .: .::: ..
CCDS46 SMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAGPLSPQLLTSPFPSVASSAPPLTGK
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB5 TIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTG
. : . ... .: ..: . : :.::.: : .. ::.::: : :
CCDS46 RGRGRPRKANL--LDSMFGSP--GGL----REAGILPCGLCGKVFTDANRLRQHEAQH-G
270 280 290 300 310
220 230 240 250 260 270
pF1KB5 AKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKR
. . .. : . .: : :.:. : .: : . .:
CCDS46 VTSLQL--GYIDLP---P------PRLGENGLPISEDPDG--------------PRKRSR
320 330 340 350
280 290 300 310 320 330
pF1KB5 IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVH
::. :::.::: ::::::::::::::: ::::.:::: :::::::::::::::::.:
CCDS46 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB5 KPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPC
::: :. :::.::::::::.:..:::..::: ::. :.:.:::.::::.: . ::.::::
CCDS46 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPC
420 430 440 450 460 470
400 410 420 430 440 450
pF1KB5 HVCGKMLSSAYISDHMKVHSQGPHHVCELCNKGFTTAAYLRIHAVKDHGLQAPRADRILC
.::::.: .::..::.: ::.:: . : .::.:.
CCDS46 QVCGKYLRAAYMADHLKKHSEGPSNFCSICNRGLQAPGAHPEWGSSVPLRQDLWQQRRPE
480 490 500 510 520 530
460 470 480 490
pF1KB5 KLCSVHCKTPAQLAGHMQTHLGGAAPPVPGDAPQPQPTC
CCDS46 MLTSGSD
>>CCDS13895.1 PATZ1 gene_id:23598|Hs108|chr22 (641 aa)
initn: 983 init1: 838 opt: 849 Z-score: 390.5 bits: 82.1 E(32554): 2e-15
Smith-Waterman score: 903; 38.9% identity (59.7% similar) in 434 aa overlap (69-493:177-564)
40 50 60 70 80 90
pF1KB5 QNPLQVGAELQSRFFASQGCAQSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAA
:: : . . ::.. .::: ... :.
CCDS13 SVIEICQEVIKQSNVQILVPPARADIMLFRPPGT--SDLGFPLDMTNGAALAANSNGIAG
150 160 170 180 190 200
100 110 120 130 140 150
pF1KB5 AAAAAAAAAAVAAAPPAPAAASTVDTAALKQPP-APPPPPPPVSAP---AAEAAPPASAA
. :: .:.: : :. : .. . : : : : ...: .: .::: ..
CCDS13 SMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAGPLSPQLLTSPFPSVASSAPPLTGK
210 220 230 240 250 260
160 170 180 190 200 210
pF1KB5 TIAAAAATAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAIHTG
. : . ... .: ..: . : :.::.: : .. ::.::: : :
CCDS13 RGRGRPRKANL--LDSMFGSP--GGL----REAGILPCGLCGKVFTDANRLRQHEAQH-G
270 280 290 300 310
220 230 240 250 260 270
pF1KB5 AKAGRVPSGAMKMPTMVPLSLLSVPQLSGAGGGGGEAGAGGGAAAVAAGGVVTTTASGKR
. . .. : . .: : :.:. : .: : . .:
CCDS13 VTSLQL--GYIDLP---P------PRLGENGLPISEDPDG--------------PRKRSR
320 330 340 350
280 290 300 310 320 330
pF1KB5 IRKNHACEMCGKAFRDVYHLNRHKLSHSDEKPYQCPVCQQRFKRKDRMSYHVRSHDGAVH
::. :::.::: ::::::::::::::: ::::.:::: :::::::::::::::::.:
CCDS13 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVG
360 370 380 390 400 410
340 350 360 370 380 390
pF1KB5 KPYNCSHCGKSFSRPDHLNSHVRQVHSTERPFKCEKCEAAFATKDRLRAHTVRHEEKVPC
::: :. :::.::::::::.:..:::..::: ::. :.:.:::.::::.: . ::.::::
CCDS13 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPC
420 430 440 450 460 470
400 410 420 430 440 450
pF1KB5 HVCGKMLSSAYISDHMKVHSQGPHHVCELCNK-GFTTAAYLRIHAVKDHGLQAPRADRIL
.::::.: .::..::.: ::.:: . : .::. : . :.. ..: . .:
CCDS13 QVCGKYLRAAYMADHLKKHSEGPSNFCSICNREGQKCSHQDPIESSDSYGDLSDASD---
480 490 500 510 520
460 470 480 490
pF1KB5 CKLCSVHCKTPAQLAGHMQTHLGGAAPP----VPGDAPQPQPTC
::: . ... . :.: :. : : :
CCDS13 -------LKTPEKQSANGSFSCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQK
530 540 550 560 570 580
CCDS13 VHVRALGGPLGDLGPALGSPFSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEG
590 600 610 620 630 640
493 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:57:24 2016 done: Sun Nov 6 21:57:24 2016
Total Scan time: 4.240 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]