Result of FASTA (ccds) for
pFN21AE0031
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0031, 494 aa
1>>>pF1KE0031 494 - 494 aa - 494 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8515+/-0.00114; mu= 11.1140+/- 0.068
mean_var=110.7554+/-22.090, 0's: 0 Z-trim(105.3): 109 B-trim: 438 in 1/49
Lambda= 0.121869
statistics sampled from 8253 (8368) to 8253 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.613), E-opt: 0.2 (0.257), width: 16
Scan time: 2.840
The best scores are: opt bits E(32554)
CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17 ( 494) 3291 589.9 2.1e-168
CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17 ( 438) 2930 526.4 2.5e-149
CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13 ( 504) 635 122.9 8.1e-28
>>CCDS45677.1 DNAJC7 gene_id:7266|Hs108|chr17 (494 aa)
initn: 3291 init1: 3291 opt: 3291 Z-score: 3136.8 bits: 589.9 E(32554): 2.1e-168
Smith-Waterman score: 3291; 99.8% identity (100.0% similar) in 494 aa overlap (1-494:1-494)
10 20 30 40 50 60
pF1KE0 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 NASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 RALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RALELDHKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 LKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 PDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PDHEKACIACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 GTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE0 KEHKQLLKNAQLELRKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE0 QKEEEKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QKEEEKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFS
430 440 450 460 470 480
490
pF1KE0 FEASGPGNFFFQFG
::::::::::::::
CCDS45 FEASGPGNFFFQFG
490
>>CCDS45678.1 DNAJC7 gene_id:7266|Hs108|chr17 (438 aa)
initn: 2930 init1: 2930 opt: 2930 Z-score: 2794.5 bits: 526.4 E(32554): 2.5e-149
Smith-Waterman score: 2930; 99.8% identity (100.0% similar) in 438 aa overlap (57-494:1-438)
30 40 50 60 70 80
pF1KE0 EAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQ
::::::::::::::::::::::::::::::
CCDS45 MCPKNASYYGNRAATLMMLGRFREALGDAQ
10 20 30
90 100 110 120 130 140
pF1KE0 QSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYE
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE0 KIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQSVASDILRMD
100 110 120 130 140 150
210 220 230 240 250 260
pF1KE0 STNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 STNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKA
160 170 180 190 200 210
270 280 290 300 310 320
pF1KE0 FKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDT
220 230 240 250 260 270
330 340 350 360 370 380
pF1KE0 YIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELRKSKRKDYYKIL
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
CCDS45 YIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKIL
280 290 300 310 320 330
390 400 410 420 430 440
pF1KE0 GVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTR
340 350 360 370 380 390
450 460 470 480 490
pF1KE0 YDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFSFEASGPGNFFFQFG
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 YDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGFSFEASGPGNFFFQFG
400 410 420 430
>>CCDS9479.1 DNAJC3 gene_id:5611|Hs108|chr13 (504 aa)
initn: 320 init1: 184 opt: 635 Z-score: 612.9 bits: 122.9 E(32554): 8.1e-28
Smith-Waterman score: 635; 28.3% identity (62.7% similar) in 480 aa overlap (27-493:36-503)
10 20 30 40 50
pF1KE0 MAAAAECDVVMAATEPELLDDQEAKREAETFKEQGNAYYAKKDYNEAYNYYTKAID
..: : :. : . .: . . :.:
CCDS94 SVTSRLGSVFPFLLVLVDLQYEGAECGVNADVEKHLELGKKLLAAGQLADALSQFHAAVD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 MCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAAC
: : : ::.... .:. . :: : . ..: .:. ..:..:. :. :. :
CCDS94 GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 RSFQRALELD---HKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAP
.:...:. . ... .::... ... ... .. : . : . :. .. .:. ::
CCDS94 DDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 ACHRFKILKAECLAMLGRYPEAQSVASDILRMDSTNADALYVRGLCLYYE--DCIEKAVQ
... :.:::. :. .: : . .. . :..:.: . :::. : : ...
CCDS94 WDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFY-KISTLYYQLGDH-ELSLS
190 200 210 220 230 240
240 250 260 270 280
pF1KE0 FFVQALRMAPDHEKACIAC-RNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPN--
. :.. :: : :.: ...: :. :.... ...: : : : .. .:.
CCDS94 EVRECLKLDQDH-KRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIA
250 260 270 280 290 300
290 300 310 320 330 340
pF1KE0 --NIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEE
..... .. :. :: .: .::. :....... ..: ::. :. :.:.:
CCDS94 EYTVRSKERI-CH---CFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDE
310 320 330 340 350
350 360 370 380 390 400
pF1KE0 AVRDYEKVYQ-TEKTKEHKQLLKNAQLELRKSKRKDYYKILGVDKNASEDEIKKAYRKRA
:..::: . . .:. .. .. :..:: :..:...:::::::: .::...:: ::::: :
CCDS94 AIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLA
360 370 380 390 400 410
410 420 430 440 450 460
pF1KE0 LMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQD-LDEEGMNMGDFD
:. ::: . . : .:. :::: ... : .::::. . ..:.:.: :: :... : .
CCDS94 LQWHPDNFQ--NEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDGEDPLDAESQQGGGGN
420 430 440 450 460 470
470 480 490
pF1KE0 PNNIFKAFFGGPGGFS-FEASGPGNFFFQFG
: :. ... ::. : ..:: : :.:
CCDS94 P---FHRSWNSWQGFNPFSSGGPFRFKFHFN
480 490 500
494 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:52:12 2016 done: Sat Nov 5 21:52:13 2016
Total Scan time: 2.840 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]